Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC020405A_C01 KMC020405A_c01
(582 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA89423.1| allyl alcohol dehydrogenase [Nicotiana tabacum] 275 4e-73
ref|NP_197202.2| quinone oxidoreductase - like protein; protein ... 273 9e-73
pir||T51555 quinone oxidoreductase-like protein - Arabidopsis th... 273 9e-73
gb|AAL38796.1| putative quinone oxidoreductase [Arabidopsis thal... 273 1e-72
ref|NP_197201.1| quinone oxidoreductase - like protein; protein ... 272 2e-72
>dbj|BAA89423.1| allyl alcohol dehydrogenase [Nicotiana tabacum]
Length = 343
Score = 275 bits (702), Expect = 4e-73
Identities = 136/193 (70%), Positives = 159/193 (81%), Gaps = 1/193 (0%)
Frame = +1
Query: 7 QVVLSNYVSGFPKESDMEIVDSTITLKLPEGSNGVLLKNLYLSCDPYMRTLMNEDSTLGL 186
QV+L NYV+G+PKESDMEI + TI LK+PEGSN V++KNLYLSCDPYMR+ M + +
Sbjct: 9 QVILKNYVTGYPKESDMEIKNVTIKLKVPEGSNDVVVKNLYLSCDPYMRSRMRKIEGSYV 68
Query: 187 GRLTLGSPMMGYGVARVVESGNPDYKKGDLVWGITKWEEYSLVSAPQ-FFKIQHTDVPLS 363
GSP+ GYGVA+V+ESG+P ++KGDLVWG+T WEEYS+++ Q FKI DVPLS
Sbjct: 69 ESFAPGSPITGYGVAKVLESGDPKFQKGDLVWGMTGWEEYSIITPTQTLFKIHDKDVPLS 128
Query: 364 YYTGILGMPGMTAYTGFFEVGSAKKGENVFVSAASGAVGQLVGQFAKLNGCYVVGSAGSK 543
YYTGILGMPGMTAY GF EV S KKGE VFVSAASGAVGQLVGQFAK+ GCYVVGSAGSK
Sbjct: 129 YYTGILGMPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCYVVGSAGSK 188
Query: 544 EKVELLKEKFGYD 582
EKV+LLK KFG+D
Sbjct: 189 EKVDLLKSKFGFD 201
>ref|NP_197202.2| quinone oxidoreductase - like protein; protein id: At5g17000.1,
supported by cDNA: gi_16604343, supported by cDNA:
gi_17529139 [Arabidopsis thaliana]
gi|16604344|gb|AAL24178.1| AT5g16970/F2K13_120
[Arabidopsis thaliana] gi|23297366|gb|AAN12951.1|
putative quinone oxidoreductase [Arabidopsis thaliana]
Length = 345
Score = 273 bits (699), Expect = 9e-73
Identities = 136/197 (69%), Positives = 158/197 (80%), Gaps = 5/197 (2%)
Frame = +1
Query: 7 QVVLSNYVSGFPKESDMEIVDSTITLKLPEGSNGVLLKNLYLSCDPYMRTLMN--EDSTL 180
QVVL NYVSGFPKESD + +T+ KLP GSN VL+KNLYLSCDPYMR M + ST
Sbjct: 7 QVVLKNYVSGFPKESDFDFKTTTVEFKLPGGSNSVLVKNLYLSCDPYMRIRMGKPDPSTA 66
Query: 181 GLGRLTL-GSPMMGYGVARVVESGNPDYKKGDLVWGITKWEEYSLVS--APQFFKIQHTD 351
L + G P+ GYGV+RV+ESG+PDYKKGDL+WGI WEEYS+++ FKIQHTD
Sbjct: 67 ALAQAYAPGKPIFGYGVSRVIESGHPDYKKGDLLWGIVGWEEYSVITPMTHMHFKIQHTD 126
Query: 352 VPLSYYTGILGMPGMTAYTGFFEVGSAKKGENVFVSAASGAVGQLVGQFAKLNGCYVVGS 531
+PLSYYTG+LGMPGMTAY GF+EV S K+GE V+VSAASGAVGQLVGQFAK+ GCYVVGS
Sbjct: 127 IPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQFAKMMGCYVVGS 186
Query: 532 AGSKEKVELLKEKFGYD 582
AGS EKV+LLK KFG+D
Sbjct: 187 AGSTEKVDLLKTKFGFD 203
>pir||T51555 quinone oxidoreductase-like protein - Arabidopsis thaliana
gi|9755701|emb|CAC01713.1| quinone oxidoreductase-like
protein [Arabidopsis thaliana]
Length = 358
Score = 273 bits (699), Expect = 9e-73
Identities = 136/197 (69%), Positives = 158/197 (80%), Gaps = 5/197 (2%)
Frame = +1
Query: 7 QVVLSNYVSGFPKESDMEIVDSTITLKLPEGSNGVLLKNLYLSCDPYMRTLMN--EDSTL 180
QVVL NYVSGFPKESD + +T+ KLP GSN VL+KNLYLSCDPYMR M + ST
Sbjct: 7 QVVLKNYVSGFPKESDFDFKTTTVEFKLPGGSNSVLVKNLYLSCDPYMRIRMGKPDPSTA 66
Query: 181 GLGRLTL-GSPMMGYGVARVVESGNPDYKKGDLVWGITKWEEYSLVS--APQFFKIQHTD 351
L + G P+ GYGV+RV+ESG+PDYKKGDL+WGI WEEYS+++ FKIQHTD
Sbjct: 67 ALAQAYAPGKPIFGYGVSRVIESGHPDYKKGDLLWGIVGWEEYSVITPMTHMHFKIQHTD 126
Query: 352 VPLSYYTGILGMPGMTAYTGFFEVGSAKKGENVFVSAASGAVGQLVGQFAKLNGCYVVGS 531
+PLSYYTG+LGMPGMTAY GF+EV S K+GE V+VSAASGAVGQLVGQFAK+ GCYVVGS
Sbjct: 127 IPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQFAKMMGCYVVGS 186
Query: 532 AGSKEKVELLKEKFGYD 582
AGS EKV+LLK KFG+D
Sbjct: 187 AGSTEKVDLLKTKFGFD 203
>gb|AAL38796.1| putative quinone oxidoreductase [Arabidopsis thaliana]
Length = 345
Score = 273 bits (697), Expect = 1e-72
Identities = 136/197 (69%), Positives = 157/197 (79%), Gaps = 5/197 (2%)
Frame = +1
Query: 7 QVVLSNYVSGFPKESDMEIVDSTITLKLPEGSNGVLLKNLYLSCDPYMRTLMN--EDSTL 180
QVVL NYVSGFPKESD + +T+ KLP GSN VL+KNLYLSCDPYMR M + ST
Sbjct: 7 QVVLKNYVSGFPKESDFDFKTTTVEFKLPGGSNSVLVKNLYLSCDPYMRIRMGKPDPSTA 66
Query: 181 GLGRLTL-GSPMMGYGVARVVESGNPDYKKGDLVWGITKWEEYSLVS--APQFFKIQHTD 351
L + G P+ GYGV+RV+ESG+PDYKKGDL+WGI WEEYS+++ FKIQHTD
Sbjct: 67 ALAQAYAPGKPIFGYGVSRVIESGHPDYKKGDLLWGIVGWEEYSVITPMTHMHFKIQHTD 126
Query: 352 VPLSYYTGILGMPGMTAYTGFFEVGSAKKGENVFVSAASGAVGQLVGQFAKLNGCYVVGS 531
+PLSYYTG+LGMPGMTAY GF+EV S K+GE V+VSAASGAVGQLVGQFAK+ GCYVVGS
Sbjct: 127 IPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQFAKMMGCYVVGS 186
Query: 532 AGSKEKVELLKEKFGYD 582
AGS EKV LLK KFG+D
Sbjct: 187 AGSTEKVNLLKTKFGFD 203
>ref|NP_197201.1| quinone oxidoreductase - like protein; protein id: At5g16990.1,
supported by cDNA: gi_17529037, supported by cDNA:
gi_20259086 [Arabidopsis thaliana]
gi|21431800|sp|Q39173|P2_ARATH Probable NADP-dependent
oxidoreductase P2 gi|11358741|pir||T51554 quinone
oxidoreductase-like protein - Arabidopsis thaliana
gi|9755700|emb|CAC01712.1| quinone oxidoreductase-like
protein [Arabidopsis thaliana]
gi|17529038|gb|AAL38729.1| putative quinone
oxidoreductase [Arabidopsis thaliana]
gi|20259087|gb|AAM14259.1| putative quinone
oxidoreductase [Arabidopsis thaliana]
Length = 343
Score = 272 bits (696), Expect = 2e-72
Identities = 134/196 (68%), Positives = 160/196 (81%), Gaps = 4/196 (2%)
Frame = +1
Query: 7 QVVLSNYVSGFPKESDMEIVDSTITLKLPEGSNGVLLKNLYLSCDPYMRTLMNE-DSTLG 183
QV+ ++VSGFPKESD +T+ L++PEGS VL+KNLYLSCDPYMR+ M + D +
Sbjct: 6 QVIFKDHVSGFPKESDFNFTTTTVELRVPEGSKSVLVKNLYLSCDPYMRSRMGKPDPSSA 65
Query: 184 LGRLTL-GSPMMGYGVARVVESGNPDYKKGDLVWGITKWEEYSLVS--APQFFKIQHTDV 354
L + G P+ GYGV+RV+ESG+PDYKKGDL+WGI WEEYS+++ A FKIQHTDV
Sbjct: 66 LAQAYAPGKPIYGYGVSRVIESGHPDYKKGDLLWGIVGWEEYSVITPMAHMHFKIQHTDV 125
Query: 355 PLSYYTGILGMPGMTAYTGFFEVGSAKKGENVFVSAASGAVGQLVGQFAKLNGCYVVGSA 534
PLSYYTG+LGMPGMTAY GF+EV S KKGE V+VSAASGAVGQLVGQFAK+ GCYVVGSA
Sbjct: 126 PLSYYTGLLGMPGMTAYAGFYEVCSPKKGETVYVSAASGAVGQLVGQFAKMMGCYVVGSA 185
Query: 535 GSKEKVELLKEKFGYD 582
GSKEKV+LLK KFG+D
Sbjct: 186 GSKEKVDLLKTKFGFD 201
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.316 0.137 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 544,760,706
Number of Sequences: 1393205
Number of extensions: 12283865
Number of successful extensions: 27473
Number of sequences better than 10.0: 378
Number of HSP's better than 10.0 without gapping: 26686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27288
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21712003912
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
