Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC020403A_C01 KMC020403A_c01
(542 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB85362.1| P0519D04.21 [Oryza sativa (japonica cultivar-gro... 176 2e-43
ref|NP_177867.1| lysophospholipase isolog, putative; protein id:... 159 2e-38
gb|AAM60954.1| lysophospholipase isolog, putative [Arabidopsis t... 159 2e-38
gb|AAK02033.2|AC074283_14 Putative lipase-like protein [Oryza sa... 150 7e-36
ref|NP_568327.1| lipase-like protein; protein id: At5g16120.1, s... 150 1e-35
>dbj|BAB85362.1| P0519D04.21 [Oryza sativa (japonica cultivar-group)]
Length = 294
Score = 176 bits (446), Expect = 2e-43
Identities = 84/122 (68%), Positives = 100/122 (81%)
Frame = -2
Query: 541 LFPNQDLAELAFREPSKRNLAVYNVICYEDNPRLKTGLELLRTTKEIESQVQKVSAPLLI 362
LFP +D+ +LAFR+PSKR +A YN I Y RL+T +ELL+ TK+IESQ++K+ +PLLI
Sbjct: 173 LFPQKDIGDLAFRDPSKRKVAEYNAISYTQQMRLRTAVELLKATKDIESQLEKICSPLLI 232
Query: 361 LHGAADKVTDPLVSQFLYEKASSKDKTLKLYEDGYHCILEGEPDDRIFAVHDDIISWLDF 182
LHGAAD VTDP VS+FLYEKAS+KDKTLKLYEDGYH ILEGEPDDRI +DIISWLD
Sbjct: 233 LHGAADLVTDPHVSEFLYEKASTKDKTLKLYEDGYHSILEGEPDDRISTAINDIISWLDS 292
Query: 181 RC 176
C
Sbjct: 293 HC 294
>ref|NP_177867.1| lysophospholipase isolog, putative; protein id: At1g77420.1,
supported by cDNA: 105948. [Arabidopsis thaliana]
gi|25406502|pir||E96803 probable lipase, 4162-5963
[imported] - Arabidopsis thaliana
gi|11079483|gb|AAG29195.1|AC078898_5 lysophospholipase
isolog, putative [Arabidopsis thaliana]
gi|12323393|gb|AAG51674.1|AC010704_18 putative lipase;
4162-5963 [Arabidopsis thaliana]
gi|26452792|dbj|BAC43476.1| putative lipase [Arabidopsis
thaliana] gi|28973023|gb|AAO63836.1| putative
lysophospholipase isolog [Arabidopsis thaliana]
Length = 382
Score = 159 bits (403), Expect = 2e-38
Identities = 77/125 (61%), Positives = 95/125 (75%)
Frame = -2
Query: 541 LFPNQDLAELAFREPSKRNLAVYNVICYEDNPRLKTGLELLRTTKEIESQVQKVSAPLLI 362
LFP +DL++ FR+ SKR L Y+VICY+D RLKT +ELL T++IE QV KVS PLLI
Sbjct: 258 LFPKRDLSDFFFRDLSKRKLCEYDVICYDDQTRLKTAVELLNATRDIEMQVDKVSLPLLI 317
Query: 361 LHGAADKVTDPLVSQFLYEKASSKDKTLKLYEDGYHCILEGEPDDRIFAVHDDIISWLDF 182
LHG DKVTDP VS+FL++ A S+DKTLKLY GYHCILEG+ D+ IF V +DI++WLD
Sbjct: 318 LHGDTDKVTDPTVSKFLHKHAVSQDKTLKLYPGGYHCILEGDTDENIFTVINDIVAWLDA 377
Query: 181 RCQLK 167
R K
Sbjct: 378 RVDPK 382
>gb|AAM60954.1| lysophospholipase isolog, putative [Arabidopsis thaliana]
Length = 382
Score = 159 bits (403), Expect = 2e-38
Identities = 77/125 (61%), Positives = 95/125 (75%)
Frame = -2
Query: 541 LFPNQDLAELAFREPSKRNLAVYNVICYEDNPRLKTGLELLRTTKEIESQVQKVSAPLLI 362
LFP +DL++ FR+ SKR L Y+VICY+D RLKT +ELL T++IE QV KVS PLLI
Sbjct: 258 LFPKRDLSDFFFRDLSKRKLCEYDVICYDDQTRLKTAVELLNATRDIEMQVDKVSLPLLI 317
Query: 361 LHGAADKVTDPLVSQFLYEKASSKDKTLKLYEDGYHCILEGEPDDRIFAVHDDIISWLDF 182
LHG DKVTDP VS+FL++ A S+DKTLKLY GYHCILEG+ D+ IF V +DI++WLD
Sbjct: 318 LHGDTDKVTDPTVSKFLHKHAVSQDKTLKLYPGGYHCILEGDTDENIFTVINDIVAWLDA 377
Query: 181 RCQLK 167
R K
Sbjct: 378 RVDPK 382
>gb|AAK02033.2|AC074283_14 Putative lipase-like protein [Oryza sativa]
Length = 464
Score = 150 bits (380), Expect = 7e-36
Identities = 78/141 (55%), Positives = 95/141 (67%), Gaps = 22/141 (15%)
Frame = -2
Query: 541 LFPNQDLAELAFREPSKRNLAVYNVICYEDNPRLKTGLELLRTTKEIESQVQK------- 383
L P +DLAELAF+E K+ YNVI Y+D PRL+T LE+LRTTKEIES++++
Sbjct: 314 LVPQKDLAELAFKEKKKQEQCSYNVIAYKDKPRLRTALEMLRTTKEIESRLEEFFTSCRI 373
Query: 382 ---------------VSAPLLILHGAADKVTDPLVSQFLYEKASSKDKTLKLYEDGYHCI 248
VS P++ILHG D VTDP VS+ LY+KA S DKTL+LY+D YH I
Sbjct: 374 ANGLLFRSITISVPLVSLPIIILHGEGDLVTDPAVSKALYDKAKSSDKTLRLYKDAYHAI 433
Query: 247 LEGEPDDRIFAVHDDIISWLD 185
LEGEPD+ IF V DDIISWLD
Sbjct: 434 LEGEPDEAIFQVLDDIISWLD 454
>ref|NP_568327.1| lipase-like protein; protein id: At5g16120.1, supported by cDNA:
gi_13430613, supported by cDNA: gi_15293170 [Arabidopsis
thaliana] gi|13430614|gb|AAK25929.1|AF360219_1 putative
lipase [Arabidopsis thaliana] gi|15293171|gb|AAK93696.1|
putative lipase [Arabidopsis thaliana]
Length = 351
Score = 150 bits (379), Expect = 1e-35
Identities = 72/119 (60%), Positives = 90/119 (75%)
Frame = -2
Query: 541 LFPNQDLAELAFREPSKRNLAVYNVICYEDNPRLKTGLELLRTTKEIESQVQKVSAPLLI 362
L P +DLAE FR+ KR++ YN+ICY PRL+T +E+LRTT++IE Q+Q+VS P+LI
Sbjct: 219 LVPQKDLAEAGFRDIRKRDMTPYNMICYSGKPRLRTAVEMLRTTQDIEKQLQEVSLPILI 278
Query: 361 LHGAADKVTDPLVSQFLYEKASSKDKTLKLYEDGYHCILEGEPDDRIFAVHDDIISWLD 185
LHG AD VTDP VS+ LYEKA S DK + LYE+ YH +LEGEPDD I V DIISWL+
Sbjct: 279 LHGEADTVTDPSVSRELYEKAKSPDKKIVLYENAYHSLLEGEPDDMILRVLSDIISWLN 337
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 414,236,096
Number of Sequences: 1393205
Number of extensions: 7706559
Number of successful extensions: 16622
Number of sequences better than 10.0: 141
Number of HSP's better than 10.0 without gapping: 16301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16618
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18750593680
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
