Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC020324A_C01 KMC020324A_c01
(676 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T11579 probable short chain alcohol dehydrogenase CPRD12, d... 246 2e-64
dbj|BAC53872.1| alcohol dehydroge [Phaseolus lunatus] 235 4e-61
gb|AAK38665.1| stem secoisolariciresinol dehydrogenase [Forsythi... 219 3e-56
gb|AAK83036.1|AF286651_1 TASSELSEED2-like protein [Cucumis sativus] 214 7e-55
gb|AAK83035.1|AF286650_1 CTA [Cucumis sativus] 212 4e-54
>pir||T11579 probable short chain alcohol dehydrogenase CPRD12,
drought-inducible - cowpea gi|1853968|dbj|BAA13541.1|
CPRD12 protein [Vigna unguiculata]
Length = 267
Score = 246 bits (628), Expect = 2e-64
Identities = 123/173 (71%), Positives = 147/173 (84%)
Frame = +2
Query: 155 MASVSSVSAALRRLEGKVALITGGASGIGEATARLFSKHGAKVVIADIQDDLGHSVCRDL 334
MA+ S +S ++RLEGKVA+ITGGASGIGEATARLFS+HGA VV+ADIQDD+G S+C +L
Sbjct: 1 MANGSVLSPVVKRLEGKVAIITGGASGIGEATARLFSQHGAHVVVADIQDDVGLSLCNEL 60
Query: 335 ESASFVHCNVTKEDEVETAVNTTVSKHGKLDIMFNNAGISGDNNISILNNTKSDFEQVFS 514
+SA +VHC+VTKE+++E V+T VSK GKLDIMFNNAG + SIL+NTKSDFE+V S
Sbjct: 61 KSAIYVHCDVTKEEDIEKCVDTAVSKFGKLDIMFNNAGTGDEFKKSILDNTKSDFERVIS 120
Query: 515 VNVFGAFLGTKHAARVMVPARRGSIINTASVSGLIGGATPHAYTSSKHAVVGL 673
VN+ G FLGTKHAARVM+PARRG IINTASV+G IGG HAYTSSKHA+VGL
Sbjct: 121 VNLVGPFLGTKHAARVMIPARRGCIINTASVAGCIGGGATHAYTSSKHALVGL 173
>dbj|BAC53872.1| alcohol dehydroge [Phaseolus lunatus]
Length = 274
Score = 235 bits (600), Expect = 4e-61
Identities = 119/173 (68%), Positives = 143/173 (81%)
Frame = +2
Query: 155 MASVSSVSAALRRLEGKVALITGGASGIGEATARLFSKHGAKVVIADIQDDLGHSVCRDL 334
MA VS+VSAA++RLEGKVA+ITGGASGIG ATARLFS+HGA VVIADIQDDLG SVC +L
Sbjct: 1 MAHVSAVSAAVKRLEGKVAIITGGASGIGAATARLFSEHGAHVVIADIQDDLGLSVCNEL 60
Query: 335 ESASFVHCNVTKEDEVETAVNTTVSKHGKLDIMFNNAGISGDNNISILNNTKSDFEQVFS 514
+SA +VHC+VTKE++VE VN TVSK+GKLDIM NNAG + SI++N S+FE+V S
Sbjct: 61 KSAVYVHCDVTKEEDVEKCVNVTVSKYGKLDIMLNNAGTCHELKDSIVDNITSEFERVIS 120
Query: 515 VNVFGAFLGTKHAARVMVPARRGSIINTASVSGLIGGATPHAYTSSKHAVVGL 673
VNV G FLGTKHAARVM+PA+RG IINT+S++G G +PHAY SKH + GL
Sbjct: 121 VNVVGPFLGTKHAARVMIPAKRGCIINTSSIAGCRGTGSPHAYVVSKHGLEGL 173
>gb|AAK38665.1| stem secoisolariciresinol dehydrogenase [Forsythia x intermedia]
Length = 277
Score = 219 bits (558), Expect = 3e-56
Identities = 113/176 (64%), Positives = 141/176 (79%), Gaps = 3/176 (1%)
Frame = +2
Query: 155 MASVSSVSAAL-RRLEGKVALITGGASGIGEATARLFSKHGAKVVIADIQDDLGHSVCRD 331
MA+ S V A+ RRLEGKVALITGGASGIGE TA+LFS+HGAKV IAD+QD+LGHSV
Sbjct: 1 MAATSQVLTAIARRLEGKVALITGGASGIGETTAKLFSQHGAKVAIADVQDELGHSVVEA 60
Query: 332 L--ESASFVHCNVTKEDEVETAVNTTVSKHGKLDIMFNNAGISGDNNISILNNTKSDFEQ 505
+ +++++HC+VT ED V+ AV+ TVS +GKLDIMF+NAGIS N I++N K+DFE+
Sbjct: 61 IGTSNSTYIHCDVTNEDGVKNAVDNTVSTYGKLDIMFSNAGISDPNRPRIIDNEKADFER 120
Query: 506 VFSVNVFGAFLGTKHAARVMVPARRGSIINTASVSGLIGGATPHAYTSSKHAVVGL 673
VFSVNV G FL KHAARVM+PAR G+II+TAS+S +GG + HAY SKHAV+GL
Sbjct: 121 VFSVNVTGVFLCMKHAARVMIPARSGNIISTASLSSTMGGGSSHAYCGSKHAVLGL 176
>gb|AAK83036.1|AF286651_1 TASSELSEED2-like protein [Cucumis sativus]
Length = 271
Score = 214 bits (546), Expect = 7e-55
Identities = 112/175 (64%), Positives = 136/175 (77%), Gaps = 3/175 (1%)
Frame = +2
Query: 161 SVSSVSAALRRLEGKVALITGGASGIGEATARLFSKHGAKVVIADIQDDLGHSVCRDLES 340
S+ + A RRLEGKVA+ITGGA GIGE TA+LF KHGAKVVIADIQD LG ++C+DL
Sbjct: 2 SIQLLPAIARRLEGKVAVITGGARGIGEQTAKLFFKHGAKVVIADIQDHLGQTLCKDLGQ 61
Query: 341 AS--FVHCNVTKEDEVETAVNTTVSKHGKLDIMFNNAGISGDN-NISILNNTKSDFEQVF 511
+S FVHC+VTKE +VETAV+T VSK+GKLDIM NNAG+ ++ N L + F++V
Sbjct: 62 SSSVFVHCDVTKEKDVETAVDTAVSKYGKLDIMLNNAGVFEESPNFDFLKDDPLTFQRVV 121
Query: 512 SVNVFGAFLGTKHAARVMVPARRGSIINTASVSGLIGGATPHAYTSSKHAVVGLM 676
+VN+ GAFLGTKHAARVM PA RGSI+ TAS+ +IGG HAYTSSKH V+GLM
Sbjct: 122 NVNLVGAFLGTKHAARVMKPAGRGSIVTTASICSVIGGIGTHAYTSSKHGVLGLM 176
>gb|AAK83035.1|AF286650_1 CTA [Cucumis sativus]
Length = 271
Score = 212 bits (539), Expect = 4e-54
Identities = 111/175 (63%), Positives = 136/175 (77%), Gaps = 3/175 (1%)
Frame = +2
Query: 161 SVSSVSAALRRLEGKVALITGGASGIGEATARLFSKHGAKVVIADIQDDLGHSVCRDL-- 334
S+ + A RRLEGKVA+ITGGA GIGE TA+LF KHGAKVVIADIQD LG ++C+DL
Sbjct: 2 SIQLLPAIARRLEGKVAVITGGARGIGEQTAKLFFKHGAKVVIADIQDHLGQTLCKDLGQ 61
Query: 335 ESASFVHCNVTKEDEVETAVNTTVSKHGKLDIMFNNAGISGDN-NISILNNTKSDFEQVF 511
S+ FVHC+VTKE +VETAV+T VSK+GKLDIM NNAG+ ++ N IL + F++V
Sbjct: 62 SSSVFVHCDVTKEKDVETAVDTAVSKYGKLDIMLNNAGVFEESPNFDILKDDPLTFQRVV 121
Query: 512 SVNVFGAFLGTKHAARVMVPARRGSIINTASVSGLIGGATPHAYTSSKHAVVGLM 676
+VN+ GA LGT+HAARVM PA RGSI+ TAS+ +IGG HAYTSSKH V+GLM
Sbjct: 122 NVNLVGASLGTRHAARVMKPAGRGSIVTTASICSVIGGIGTHAYTSSKHGVLGLM 176
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 609,661,265
Number of Sequences: 1393205
Number of extensions: 13348994
Number of successful extensions: 58813
Number of sequences better than 10.0: 3684
Number of HSP's better than 10.0 without gapping: 51501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54996
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 29704274460
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
