Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC020311A_C01 KMC020311A_c01
(725 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL68830.1|AF463407_1 Enod8.3 [Medicago truncatula] 154 9e-37
pir||S59943 early nodulin 8 precursor - alfalfa gi|304037|gb|AAB... 144 1e-33
gb|AAA91034.1| nodulin 144 1e-33
gb|AAL68832.1|AF463407_3 Enod8.1 [Medicago truncatula] 137 2e-31
pir||T52338 early nodule-specific protein ENOD8 [imported] - bar... 137 2e-31
>gb|AAL68830.1|AF463407_1 Enod8.3 [Medicago truncatula]
Length = 299
Score = 154 bits (390), Expect = 9e-37
Identities = 80/137 (58%), Positives = 90/137 (65%)
Frame = +2
Query: 314 IKLIYDLRARSFWIHNT*PIGCLPAILTNFPKAERDHYGCAT*YNEVAKYFNQKLKEALA 493
IK IY+L ARSFWIHNT PIGC+P IL NFP A +D YGCA YNEV++YFN KLKEALA
Sbjct: 125 IKNIYNLGARSFWIHNTGPIGCVPLILANFPSAIKDRYGCAKQYNEVSQYFNLKLKEALA 184
Query: 494 QLRRELPLAAIIYVDIYSPKLDHFRNLEKYGETNQNYSNSYSQTYLK*MLQIESFINIVG 673
QLR++LPLAAI YVDIYSPK F+N +KY G
Sbjct: 185 QLRKDLPLAAITYVDIYSPKYSLFQNPKKY-----------------------------G 215
Query: 674 FELPLINCCGYGGKYNY 724
FELPL+ CCG GGKYNY
Sbjct: 216 FELPLVACCGNGGKYNY 232
>pir||S59943 early nodulin 8 precursor - alfalfa gi|304037|gb|AAB41547.1| early
nodulin [Medicago sativa]
Length = 381
Score = 144 bits (364), Expect = 1e-33
Identities = 76/136 (55%), Positives = 85/136 (61%)
Frame = +2
Query: 314 IKLIYDLRARSFWIHNT*PIGCLPAILTNFPKAERDHYGCAT*YNEVAKYFNQKLKEALA 493
IK IY+L ARSFWIH+T P GC P IL NFP A +D YGCA YNEV++YFN KLKEALA
Sbjct: 209 IKNIYNLGARSFWIHSTGPKGCAPVILANFPSAIKDSYGCAKQYNEVSQYFNLKLKEALA 268
Query: 494 QLRRELPLAAIIYVDIYSPKLDHFRNLEKYGETNQNYSNSYSQTYLK*MLQIESFINIVG 673
QLR +LPLAAI YVDIYSPK F N +KY G
Sbjct: 269 QLRSDLPLAAITYVDIYSPKYSLFTNPKKY-----------------------------G 299
Query: 674 FELPLINCCGYGGKYN 721
FELP + CCGYGG+YN
Sbjct: 300 FELPYVACCGYGGEYN 315
>gb|AAA91034.1| nodulin
Length = 381
Score = 144 bits (364), Expect = 1e-33
Identities = 76/136 (55%), Positives = 85/136 (61%)
Frame = +2
Query: 314 IKLIYDLRARSFWIHNT*PIGCLPAILTNFPKAERDHYGCAT*YNEVAKYFNQKLKEALA 493
IK IY+L ARSFWIH+T P GC P IL NFP A +D YGCA YNEV++YFN KLKEALA
Sbjct: 209 IKNIYNLGARSFWIHSTGPKGCAPVILANFPSAIKDSYGCAKQYNEVSQYFNLKLKEALA 268
Query: 494 QLRRELPLAAIIYVDIYSPKLDHFRNLEKYGETNQNYSNSYSQTYLK*MLQIESFINIVG 673
QLR +LPLAAI YVDIYSPK F N +KY G
Sbjct: 269 QLRSDLPLAAITYVDIYSPKYSLFTNPKKY-----------------------------G 299
Query: 674 FELPLINCCGYGGKYN 721
FELP + CCGYGG+YN
Sbjct: 300 FELPYVACCGYGGEYN 315
>gb|AAL68832.1|AF463407_3 Enod8.1 [Medicago truncatula]
Length = 381
Score = 137 bits (345), Expect = 2e-31
Identities = 73/136 (53%), Positives = 81/136 (58%)
Frame = +2
Query: 314 IKLIYDLRARSFWIHNT*PIGCLPAILTNFPKAERDHYGCAT*YNEVAKYFNQKLKEALA 493
IK IY+L ARSFWIH T P GC P IL NFP A +D YGCA YNEV++YFN KLKEALA
Sbjct: 209 IKNIYNLGARSFWIHGTGPKGCAPVILANFPSAIKDSYGCAKQYNEVSQYFNFKLKEALA 268
Query: 494 QLRRELPLAAIIYVDIYSPKLDHFRNLEKYGETNQNYSNSYSQTYLK*MLQIESFINIVG 673
+LR L AAI YVDIY+PK F N EKY G
Sbjct: 269 ELRSNLSSAAITYVDIYTPKYSLFTNPEKY-----------------------------G 299
Query: 674 FELPLINCCGYGGKYN 721
FELP + CCGYGG+YN
Sbjct: 300 FELPFVACCGYGGEYN 315
>pir||T52338 early nodule-specific protein ENOD8 [imported] - barrel medic
gi|3328240|gb|AAC26810.1| early nodule-specific protein
[Medicago truncatula]
Length = 381
Score = 137 bits (345), Expect = 2e-31
Identities = 73/136 (53%), Positives = 81/136 (58%)
Frame = +2
Query: 314 IKLIYDLRARSFWIHNT*PIGCLPAILTNFPKAERDHYGCAT*YNEVAKYFNQKLKEALA 493
IK IY+L ARSFWIH T P GC P IL NFP A +D YGCA YNEV++YFN KLKEALA
Sbjct: 209 IKNIYNLGARSFWIHGTGPKGCAPVILANFPSAIKDSYGCAKQYNEVSQYFNFKLKEALA 268
Query: 494 QLRRELPLAAIIYVDIYSPKLDHFRNLEKYGETNQNYSNSYSQTYLK*MLQIESFINIVG 673
+LR L AAI YVDIY+PK F N EKY G
Sbjct: 269 ELRSNLSSAAITYVDIYTPKYSLFTNPEKY-----------------------------G 299
Query: 674 FELPLINCCGYGGKYN 721
FELP + CCGYGG+YN
Sbjct: 300 FELPFVACCGYGGEYN 315
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 538,778,508
Number of Sequences: 1393205
Number of extensions: 10511164
Number of successful extensions: 28420
Number of sequences better than 10.0: 224
Number of HSP's better than 10.0 without gapping: 26062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28070
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 34062062287
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
