Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC020257A_C01 KMC020257A_c01
(537 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_197430.1| phospholipase - like protein; protein id: At5g1... 261 3e-69
ref|NP_197002.1| lysophospholipase -like protein; protein id: At... 224 4e-58
dbj|BAB62599.1| B1153F04.5 [Oryza sativa (japonica cultivar-grou... 196 2e-49
ref|NP_172576.1| lysophospholipase isolog; protein id: At1g11090... 116 1e-25
dbj|BAB93431.1| P0028G04.9 [Oryza sativa (japonica cultivar-group)] 115 3e-25
>ref|NP_197430.1| phospholipase - like protein; protein id: At5g19290.1, supported by
cDNA: 253499., supported by cDNA: gi_17380667
[Arabidopsis thaliana] gi|17380668|gb|AAL36164.1|
putative phospholipase [Arabidopsis thaliana]
gi|21554372|gb|AAM63479.1| phospholipase-like protein
[Arabidopsis thaliana] gi|23397199|gb|AAN31882.1|
putative phospholipase [Arabidopsis thaliana]
gi|26983896|gb|AAN86200.1| putative phospholipase
[Arabidopsis thaliana]
Length = 330
Score = 261 bits (668), Expect = 3e-69
Identities = 124/161 (77%), Positives = 140/161 (86%), Gaps = 1/161 (0%)
Frame = +2
Query: 56 VHPIAEANEHNPFGDLTPDEFYAHHSVSHGTEFITNSRGLKLFTQWWTPLPPAKPIGTLA 235
+HPI++ANEHNPFG LT DEFYA HSVSH + FITN RGLKLFTQWW+PLPP KPIG +A
Sbjct: 3 LHPISDANEHNPFGSLTADEFYAKHSVSHSSAFITNPRGLKLFTQWWSPLPPTKPIGIIA 62
Query: 236 VVHGFTGESSWFIQLTAVHFAKAGFATCAIDHQGHGFSDGLVAHIPDVNPVVDDGISFFN 415
VVHGFTGESSWF+QLT++ FAK+GF TCAIDHQGHGFSDGL+AHIPD+NPVVDD ISFF+
Sbjct: 63 VVHGFTGESSWFLQLTSILFAKSGFITCAIDHQGHGFSDGLIAHIPDINPVVDDCISFFD 122
Query: 416 SFRSRFDPS-LPSFLYSESLGGAIALLITLRRENPPWNGLI 535
FRSR PS LP FLYSESLGGAIAL I+LR+ W+GLI
Sbjct: 123 DFRSRQTPSDLPCFLYSESLGGAIALYISLRQRG-VWDGLI 162
>ref|NP_197002.1| lysophospholipase -like protein; protein id: At5g14980.1
[Arabidopsis thaliana] gi|11358495|pir||T51443
lysophospholipase-like protein - Arabidopsis thaliana
gi|9755665|emb|CAC01817.1| lysophospholipase-like
protein [Arabidopsis thaliana]
Length = 327
Score = 224 bits (572), Expect = 4e-58
Identities = 108/161 (67%), Positives = 132/161 (81%), Gaps = 1/161 (0%)
Frame = +2
Query: 56 VHPIAEANEHNPFGDLTPDEFYAHHSVSHGTEFITNSRGLKLFTQWWTPLPPAKPIGTLA 235
+HP++EAN +PFG L+ EFY+ HSV+H + ++TN GLKLFTQWWTPL P+G +A
Sbjct: 3 LHPVSEANASSPFGSLSAAEFYSRHSVTHSSAYVTNPTGLKLFTQWWTPLN-RPPLGLIA 61
Query: 236 VVHGFTGESSWFIQLTAVHFAKAGFATCAIDHQGHGFSDGLVAHIPDVNPVVDDGISFFN 415
VVHGFTGESSWF+QLT+V FAK+G+ TCAIDHQGHGFSDGL AHIP++N +VDD ISFF+
Sbjct: 62 VVHGFTGESSWFLQLTSVLFAKSGYLTCAIDHQGHGFSDGLTAHIPNINLIVDDCISFFD 121
Query: 416 SFRSRFDPS-LPSFLYSESLGGAIALLITLRRENPPWNGLI 535
FR R S LP+FLYSESLGGAIAL ITLR+++ WNGLI
Sbjct: 122 DFRKRHASSFLPAFLYSESLGGAIALYITLRQKH-QWNGLI 161
>dbj|BAB62599.1| B1153F04.5 [Oryza sativa (japonica cultivar-group)]
gi|21104852|dbj|BAB93436.1| P0028G04.16 [Oryza sativa
(japonica cultivar-group)]
Length = 329
Score = 196 bits (497), Expect = 2e-49
Identities = 94/152 (61%), Positives = 113/152 (73%), Gaps = 1/152 (0%)
Frame = +2
Query: 53 MVHPIAEANEHNPFGDLTPDEFYAHHSVSHGTEFITNSRGLKLFTQWWTPLPPAKPI-GT 229
M HP+AEA+E +PFG LT +EFYA H V H + N RGL++FTQ W P P+ G
Sbjct: 1 MAHPVAEADEKSPFGRLTAEEFYARHGVLHTSSTFVNPRGLRIFTQRWVPAGGDAPLLGA 60
Query: 230 LAVVHGFTGESSWFIQLTAVHFAKAGFATCAIDHQGHGFSDGLVAHIPDVNPVVDDGISF 409
+AVVHGFTGESSW +QLTAVHFAKAGFA A+DHQGHGFS+GL HIPD+ PV++D +
Sbjct: 61 IAVVHGFTGESSWTVQLTAVHFAKAGFAVAAVDHQGHGFSEGLQGHIPDIVPVLEDCEAA 120
Query: 410 FNSFRSRFDPSLPSFLYSESLGGAIALLITLR 505
F FR+ + P LP FLY ESLGGAIALL+ LR
Sbjct: 121 FAPFRADYPPPLPCFLYGESLGGAIALLLHLR 152
>ref|NP_172576.1| lysophospholipase isolog; protein id: At1g11090.1 [Arabidopsis
thaliana] gi|25402643|pir||H86244 lysophospholipase
homolog, 25331-24357 [imported] - Arabidopsis thaliana
gi|1931639|gb|AAB65474.1| lysophospholipase isolog;
25331-24357 [Arabidopsis thaliana]
gi|26450507|dbj|BAC42367.1| putative lysophospholipase
isolog [Arabidopsis thaliana]
Length = 324
Score = 116 bits (291), Expect = 1e-25
Identities = 61/141 (43%), Positives = 88/141 (62%), Gaps = 2/141 (1%)
Frame = +2
Query: 80 EHNPFGDLTPDEFYAHHSVSHGTEFITNSRGLKLFTQWWTPLPPAKPIGTLAVVHGFTGE 259
E N +G+ + ++++ + F T+ RGL LFT+ W P + P G + +VHG+ +
Sbjct: 9 EINFWGETSEEDYFNLKGIIGSKSFFTSPRGLNLFTRSWLPSSSSPPRGLIFMVHGYGND 68
Query: 260 SSWFIQLTAVHFAKAGFATCAIDHQGHGFSDGLVAHIPDVNPVVDDGISFFNSFRS--RF 433
SW Q T + A+ GFA A+D +GHG SDG+ A++P V+ VVDD ISFFNS + +F
Sbjct: 69 VSWTFQSTPIFLAQMGFACFALDIEGHGRSDGVRAYVPSVDLVVDDIISFFNSIKQNPKF 128
Query: 434 DPSLPSFLYSESLGGAIALLI 496
LP FL+ ES+GGAI LLI
Sbjct: 129 Q-GLPRFLFGESMGGAICLLI 148
>dbj|BAB93431.1| P0028G04.9 [Oryza sativa (japonica cultivar-group)]
Length = 94
Score = 115 bits (288), Expect = 3e-25
Identities = 54/88 (61%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
Frame = +2
Query: 53 MVHPIAEANEHNPFGDLTPDEFYAHHSVSHGTEFITNSRGLKLFTQWWTPLPPAKP-IGT 229
M HP+AEA+E +PFG LT +EFYA H V + + N RGL++FTQ W P P +G
Sbjct: 1 MAHPVAEADEKSPFGRLTAEEFYARHGVVNSSSTFVNPRGLRIFTQRWVPAGVDAPLLGA 60
Query: 230 LAVVHGFTGESSWFIQLTAVHFAKAGFA 313
+AVVHGFTGESSW +QLTAVHFAKAGFA
Sbjct: 61 IAVVHGFTGESSWMVQLTAVHFAKAGFA 88
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 535,045,954
Number of Sequences: 1393205
Number of extensions: 14407378
Number of successful extensions: 206371
Number of sequences better than 10.0: 10348
Number of HSP's better than 10.0 without gapping: 98219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 158980
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18173652336
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
