Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC020193A_C01 KMC020193A_c01
(446 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_198569.1| putative protein; protein id: At5g37530.1 [Arab... 163 5e-40
ref|NP_012898.1| Hypothetical ORF; Ykl027wp [Saccharomyces cerev... 38 0.025
ref|NP_011866.1| Hypothetical ORF; Yhr003cp [Saccharomyces cerev... 37 0.042
gb|AAL89976.1| AT02742p [Drosophila melanogaster] 36 0.094
ref|NP_651037.1| CG13855-PA [Drosophila melanogaster] gi|7300846... 36 0.094
>ref|NP_198569.1| putative protein; protein id: At5g37530.1 [Arabidopsis thaliana]
gi|10177437|dbj|BAB10670.1|
gene_id:MPA22.7~pir||T38013~similar to unknown protein
[Arabidopsis thaliana]
Length = 414
Score = 163 bits (412), Expect = 5e-40
Identities = 73/101 (72%), Positives = 91/101 (89%)
Frame = -1
Query: 446 TSMQVQVDVEEVMYIVKELWHGRSAREQLVKDVGRGMWRSINELMLIRWDCTKPASISNL 267
TS +V+VDVEEVMYIVKELWHGRSAR++ KDVGRGMWR++NELML+RWD KPA++SNL
Sbjct: 312 TSAEVEVDVEEVMYIVKELWHGRSARDETAKDVGRGMWRAMNELMLVRWDAKKPATVSNL 371
Query: 266 ILLKFKEVDEHESQTLDDIKEKEPEFYNRVTTVLKRAELDF 144
+LLKFKE DEHE++TL+++KE E EF+ RV+ VLK+AELDF
Sbjct: 372 VLLKFKEADEHETKTLEEVKESETEFFERVSCVLKKAELDF 412
>ref|NP_012898.1| Hypothetical ORF; Ykl027wp [Saccharomyces cerevisiae]
gi|549663|sp|P36101|YKC7_YEAST HYPOTHETICAL 50.3 KD
PROTEIN IN TFA1-PAN3 INTERGENIC REGION
gi|539295|pir||S37844 molybdopterin-converting factor
homolog YKL027w - yeast (Saccharomyces cerevisiae)
gi|486025|emb|CAA81862.1| ORF YKL027w [Saccharomyces
cerevisiae]
Length = 447
Score = 38.1 bits (87), Expect = 0.025
Identities = 23/87 (26%), Positives = 44/87 (50%)
Frame = -1
Query: 443 SMQVQVDVEEVMYIVKELWHGRSAREQLVKDVGRGMWRSINELMLIRWDCTKPASISNLI 264
S ++ + +++V Y+V+E++ G+S + L L +WD +KP S+ N++
Sbjct: 352 SQRIPLALKDVSYLVEEVFKGKSPISGIS-----------TRLTLTKWDPSKPISLQNVV 400
Query: 263 LLKFKEVDEHESQTLDDIKEKEPEFYN 183
+L E HE + L KE + Y+
Sbjct: 401 VLTKNEQKVHEDRVLKG-KESLQDVYD 426
>ref|NP_011866.1| Hypothetical ORF; Yhr003cp [Saccharomyces cerevisiae]
gi|731629|sp|P38756|YHG3_YEAST HYPOTHETICAL 48.9 KD
PROTEIN IN RPL14B-GPA1 INTERGENIC REGION
gi|626717|pir||S46801 hypothetical protein YKL027w
homolog - yeast (Saccharomyces cerevisiae)
gi|500821|gb|AAB68430.1| Yhr003cp [Saccharomyces
cerevisiae]
Length = 429
Score = 37.4 bits (85), Expect = 0.042
Identities = 23/88 (26%), Positives = 44/88 (49%)
Frame = -1
Query: 422 VEEVMYIVKELWHGRSAREQLVKDVGRGMWRSINELMLIRWDCTKPASISNLILLKFKEV 243
+EEV YIV+E++ G+S +L L +W+ K S++N++L+ +E
Sbjct: 344 LEEVGYIVEEMFRGKSPISGYS-----------TKLALTKWEANKEISLTNVVLMTKEEQ 392
Query: 242 DEHESQTLDDIKEKEPEFYNRVTTVLKR 159
+ HE + L D ++ + V ++R
Sbjct: 393 EIHEKRILLDGEKLTAVYSEEVLDFIER 420
>gb|AAL89976.1| AT02742p [Drosophila melanogaster]
Length = 381
Score = 36.2 bits (82), Expect = 0.094
Identities = 25/87 (28%), Positives = 44/87 (49%), Gaps = 1/87 (1%)
Frame = -1
Query: 446 TSMQVQVDVEEVMYIVKELWHGRSAREQLVKDVGRGMWRSINELMLIRWDCTKPASISNL 267
TS + ++V +I+ ++WHG SA + +++EL L RW+ + + N
Sbjct: 259 TSFAFVMQPDDVRHIIDKIWHGHSALSKT---------ENLSELRLPRWNKSDDWAPWNC 309
Query: 266 ILLKFKEVDEHESQTLDDI-KEKEPEF 189
I L +E +H +DDI K +P+F
Sbjct: 310 ICLTERETRDH--YKIDDIEKVYDPKF 334
>ref|NP_651037.1| CG13855-PA [Drosophila melanogaster] gi|7300846|gb|AAF55988.1|
CG13855-PA [Drosophila melanogaster]
Length = 706
Score = 36.2 bits (82), Expect = 0.094
Identities = 25/87 (28%), Positives = 44/87 (49%), Gaps = 1/87 (1%)
Frame = -1
Query: 446 TSMQVQVDVEEVMYIVKELWHGRSAREQLVKDVGRGMWRSINELMLIRWDCTKPASISNL 267
TS + ++V +I+ ++WHG SA + +++EL L RW+ + + N
Sbjct: 584 TSFAFVMQPDDVRHIIDKIWHGHSALSKT---------ENLSELRLPRWNKSDDWAPWNC 634
Query: 266 ILLKFKEVDEHESQTLDDI-KEKEPEF 189
I L +E +H +DDI K +P+F
Sbjct: 635 ICLTERETRDH--YKIDDIEKVYDPKF 659
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 346,046,914
Number of Sequences: 1393205
Number of extensions: 6468913
Number of successful extensions: 17473
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 16990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17463
length of database: 448,689,247
effective HSP length: 124
effective length of database: 275,931,827
effective search space used: 6622363848
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
