Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019969A_C01 KMC019969A_c01
(603 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF70243.1|AF213968_1 S-adenosyl-L-methionine Mg-protoporphyr... 195 3e-49
ref|NP_194238.1| magnesium-protoporphyrin IX methyltransferase -... 162 2e-39
dbj|BAA84812.1| Similar to magnesium-protoporphyrin IX methyltra... 111 8e-24
ref|ZP_00116427.1| hypothetical protein [Synechococcus sp. WH 8102] 75 7e-13
gb|ZP_00114255.1| hypothetical protein [Prochlorococcus marinus ... 75 7e-13
>gb|AAF70243.1|AF213968_1 S-adenosyl-L-methionine Mg-protoporphyrin IX methyltranserase
[Nicotiana tabacum]
Length = 325
Score = 195 bits (496), Expect = 3e-49
Identities = 106/155 (68%), Positives = 119/155 (76%), Gaps = 2/155 (1%)
Frame = +3
Query: 144 MAFSPSLGSSL-FAPNPNRTNRFPRFSPSPANPKLPLSTAFAIPPLSTAT-AADVTGAID 317
MAFS L S + FA NPN P+ P P + AIPPLSTAT + VTG +D
Sbjct: 1 MAFSSPLFSPVNFALNPN-----PQIHPKCTKPNRRNFSVCAIPPLSTATDISAVTGPLD 55
Query: 318 GTTLAVVSGGFVAGLAALLSLTDPERRRQTQAEEVGGGDKEVVREYFNNNGFQRWKKIYG 497
GTTLAV+ GG VA LAA+LSL DPERRRQ QAEEVGGGDKEVVREYFNNNGFQRWKKIYG
Sbjct: 56 GTTLAVLGGGSVAALAAILSLADPERRRQLQAEEVGGGDKEVVREYFNNNGFQRWKKIYG 115
Query: 498 DTDDVNRVQRDIRVGHAKTVENVLQMLKDEGSLNG 602
DTDDVN+VQ DIR+GH+KTVENV++ML +EGSL G
Sbjct: 116 DTDDVNKVQLDIRLGHSKTVENVMKMLTEEGSLQG 150
>ref|NP_194238.1| magnesium-protoporphyrin IX methyltransferase - like protein;
protein id: At4g25080.1, supported by cDNA: gi_14334513,
supported by cDNA: gi_17104552 [Arabidopsis thaliana]
gi|7487951|pir||T05529 magnesium-protoporphyrin IX
methyltransferase (EC 2.1.1.-) - Arabidopsis thaliana
gi|4455251|emb|CAB36750.1| magnesium-protoporphyrin IX
methyltransferase-like protein [Arabidopsis thaliana]
gi|7269358|emb|CAB79417.1| magnesium-protoporphyrin IX
methyltransferase-like protein [Arabidopsis thaliana]
gi|14334514|gb|AAK59454.1| putative
magnesium-protoporphyrin IX methyltransferase
[Arabidopsis thaliana] gi|17104553|gb|AAL34165.1|
putative magnesium-protoporphyrin IX methyltransferase
[Arabidopsis thaliana]
Length = 312
Score = 162 bits (411), Expect = 2e-39
Identities = 90/158 (56%), Positives = 110/158 (68%), Gaps = 5/158 (3%)
Frame = +3
Query: 144 MAFSPSLGSSLFAPNPNRTNRFPRFSPSPANPKLPLSTAFAIPPLS---TATAADVT--G 308
M F+PSL SS S S P+ P +T F + P S T AA VT
Sbjct: 1 MPFAPSLLSS-------------SSSVSQFLPRFPNATRFNVTPRSRAATVVAASVTDLA 47
Query: 309 AIDGTTLAVVSGGFVAGLAALLSLTDPERRRQTQAEEVGGGDKEVVREYFNNNGFQRWKK 488
+D TT+AV+ GG VA LAA++SLTDPERRR+ QAEEVGGGDKEVVREYFN+ GF+RW+K
Sbjct: 48 GVDSTTIAVLGGGSVAALAAMVSLTDPERRRKLQAEEVGGGDKEVVREYFNSTGFERWRK 107
Query: 489 IYGDTDDVNRVQRDIRVGHAKTVENVLQMLKDEGSLNG 602
IYG+TD+VNRVQ+DIR+GHAKTVEN + ML ++ SL G
Sbjct: 108 IYGETDEVNRVQKDIRLGHAKTVENTMLMLTEDRSLAG 145
>dbj|BAA84812.1| Similar to magnesium-protoporphyrin IX methyltransferase (AL035523)
[Oryza sativa (japonica cultivar-group)]
gi|11875161|dbj|BAB19374.1| putative
magnesium-protoporphyrin IX methyltransferase [Oryza
sativa (japonica cultivar-group)]
gi|28190668|gb|AAO33146.1| putative
magnesium-protoporphyrin IX methyltransferase [Oryza
sativa (japonica cultivar-group)]
Length = 326
Score = 111 bits (277), Expect = 8e-24
Identities = 67/128 (52%), Positives = 82/128 (63%), Gaps = 6/128 (4%)
Frame = +3
Query: 219 SPSPANPKLPLSTAFA--IPPLSTA--TAADVTGAIDGTTLAV-VSGGFVAGLAALLSLT 383
SP P P+ P S + + P A TAA + A D L++ + A LAA +SL+
Sbjct: 16 SPPPLIPRHPHSHSRVGLLHPQRKALTTAAALPPAADLPPLSLPAAAAAAAALAAAVSLS 75
Query: 384 DPERRRQTQAEEVGGGDKEVVREYFNNNGFQRWKKIYGD-TDDVNRVQRDIRVGHAKTVE 560
DPERRR+ QAE GGGDKE VR YFN+ GF+RW+KIYG TD VNRVQ DIR GHA+TV
Sbjct: 76 DPERRRRAQAEAAGGGDKEAVRAYFNSTGFERWRKIYGSATDGVNRVQLDIREGHARTVA 135
Query: 561 NVLQMLKD 584
L ML+D
Sbjct: 136 ATLSMLRD 143
>ref|ZP_00116427.1| hypothetical protein [Synechococcus sp. WH 8102]
Length = 237
Score = 75.1 bits (183), Expect = 7e-13
Identities = 31/56 (55%), Positives = 42/56 (74%)
Frame = +3
Query: 432 DKEVVREYFNNNGFQRWKKIYGDTDDVNRVQRDIRVGHAKTVENVLQMLKDEGSLN 599
+K+ V+ YF GF RW +IY ++DDVN+VQR+IR+GH KTV+ VL +KD G LN
Sbjct: 13 EKQEVKGYFETTGFDRWNRIYSESDDVNKVQRNIRIGHQKTVDEVLAWIKDSGELN 68
>gb|ZP_00114255.1| hypothetical protein [Prochlorococcus marinus str. MIT 9313]
Length = 237
Score = 75.1 bits (183), Expect = 7e-13
Identities = 32/64 (50%), Positives = 46/64 (71%)
Frame = +3
Query: 408 QAEEVGGGDKEVVREYFNNNGFQRWKKIYGDTDDVNRVQRDIRVGHAKTVENVLQMLKDE 587
Q +E+ +K V YFN GF RW +IY ++DDVN+VQR+IR+GH KTV++VL L++
Sbjct: 5 QRQELKQAEKTEVANYFNGTGFDRWNRIYSESDDVNKVQRNIRIGHQKTVDDVLAWLQER 64
Query: 588 GSLN 599
G L+
Sbjct: 65 GDLS 68
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 598,389,047
Number of Sequences: 1393205
Number of extensions: 16120574
Number of successful extensions: 137950
Number of sequences better than 10.0: 1819
Number of HSP's better than 10.0 without gapping: 89287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 123777
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23711793746
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
