Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019883A_C01 KMC019883A_c01
(781 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC42143.1| putative bzip transcription factor atbzip23 [Ara... 60 3e-08
ref|NP_567974.1| bZIP protein; protein id: At4g35040.1, supporte... 60 5e-08
gb|AAM63358.1| putative transcription factor [Arabidopsis thaliana] 60 5e-08
ref|NP_179268.1| bZIP protein; protein id: At2g16770.1 [Arabidop... 55 9e-07
pir||T05774 hypothetical protein M4E13.100 - Arabidopsis thalian... 53 6e-06
>dbj|BAC42143.1| putative bzip transcription factor atbzip23 [Arabidopsis thaliana]
Length = 249
Score = 60.5 bits (145), Expect = 3e-08
Identities = 29/59 (49%), Positives = 36/59 (60%)
Frame = -2
Query: 777 GASLNGDGFGGCEFEGIQCLAGQNLGLKDLRGCGGGQAVSNVNSAPSNKRKGGSRAATA 601
GAS+N G GCEF+ ++CLA QNL K++ C G VN + NKRKG RAA A
Sbjct: 190 GASMNEQGLNGCEFDQLECLANQNLAGKEIPVCSNGIGTFTVNGSGVNKRKGEPRAAKA 248
>ref|NP_567974.1| bZIP protein; protein id: At4g35040.1, supported by cDNA: 21838.,
supported by cDNA: gi_18252902 [Arabidopsis thaliana]
gi|18252903|gb|AAL62378.1| putative protein [Arabidopsis
thaliana] gi|23197904|gb|AAN15479.1| putative protein
[Arabidopsis thaliana]
Length = 261
Score = 59.7 bits (143), Expect = 5e-08
Identities = 31/59 (52%), Positives = 40/59 (67%)
Frame = -2
Query: 777 GASLNGDGFGGCEFEGIQCLAGQNLGLKDLRGCGGGQAVSNVNSAPSNKRKGGSRAATA 601
GAS+N G GC+F+ +QC+A QN L G G G + SNVN++ SNKRKGG RA+ A
Sbjct: 208 GASINDQGLSGCDFDQLQCMANQN-----LNGNGNG-SFSNVNTSVSNKRKGGHRASRA 260
>gb|AAM63358.1| putative transcription factor [Arabidopsis thaliana]
Length = 261
Score = 59.7 bits (143), Expect = 5e-08
Identities = 31/59 (52%), Positives = 40/59 (67%)
Frame = -2
Query: 777 GASLNGDGFGGCEFEGIQCLAGQNLGLKDLRGCGGGQAVSNVNSAPSNKRKGGSRAATA 601
GAS+N G GC+F+ +QC+A QN L G G G + SNVN++ SNKRKGG RA+ A
Sbjct: 208 GASINDQGLSGCDFDQLQCMANQN-----LNGNGNG-SFSNVNTSVSNKRKGGHRASRA 260
>ref|NP_179268.1| bZIP protein; protein id: At2g16770.1 [Arabidopsis thaliana]
gi|25370607|pir||A84544 hypothetical protein At2g16770
[imported] - Arabidopsis thaliana
gi|4581120|gb|AAD24610.1| hypothetical protein
[Arabidopsis thaliana]
Length = 255
Score = 55.5 bits (132), Expect = 9e-07
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = -2
Query: 777 GASLNGDGFGGCEFEGIQCLAGQNLGLKDLRGCGGGQAVSNVNSAPSNKRKG 622
GAS+N G GCEF+ ++CLA QNL K++ C G VN + NKRKG
Sbjct: 190 GASMNEQGLNGCEFDQLECLANQNLAGKEIPVCSNGIGTFTVNGSGVNKRKG 241
>pir||T05774 hypothetical protein M4E13.100 - Arabidopsis thaliana
gi|2924515|emb|CAA17769.1| putative protein [Arabidopsis
thaliana] gi|7270455|emb|CAB80221.1| putative protein
[Arabidopsis thaliana]
Length = 278
Score = 52.8 bits (125), Expect = 6e-06
Identities = 27/52 (51%), Positives = 35/52 (66%)
Frame = -2
Query: 777 GASLNGDGFGGCEFEGIQCLAGQNLGLKDLRGCGGGQAVSNVNSAPSNKRKG 622
GAS+N G GC+F+ +QC+A QN L G G G + SNVN++ SNKRKG
Sbjct: 208 GASINDQGLSGCDFDQLQCMANQN-----LNGNGNG-SFSNVNTSVSNKRKG 253
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 680,498,571
Number of Sequences: 1393205
Number of extensions: 15413248
Number of successful extensions: 53231
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 44976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52259
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 38655378996
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
