Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019875A_C01 KMC019875A_c01
(566 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T08122 cysteine endopeptidase (EC 3.4.22.-) precursor - cas... 152 2e-36
gb|AAA50755.1| cysteine proteinase 152 3e-36
gb|AAC49135.1| SAG12 protein 151 6e-36
ref|NP_568651.1| senescence-specific cysteine protease SAG12; pr... 151 6e-36
gb|AAL14199.1| cysteine proteinase precursor [Ipomoea batatas] 150 8e-36
>pir||T08122 cysteine endopeptidase (EC 3.4.22.-) precursor - castor bean
gi|2944446|gb|AAC62396.1| cysteine endopeptidase
precursor [Ricinus communis]
Length = 360
Score = 152 bits (385), Expect = 2e-36
Identities = 72/117 (61%), Positives = 85/117 (72%)
Frame = -1
Query: 551 AVSISGHEKVPASNEAMLKAAAANQPVSVAIDAGGFLFQLYSGGVFFGFCGKQLNHAVTI 372
AVSI GHE VP ++E L A ANQPVSVAIDAGG FQ YS GVF G CG +L+H V I
Sbjct: 231 AVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCGTELDHGVAI 290
Query: 371 VGYGRQVNGPKYWLVKNSWGADWGESGYMKILRDTLDKDGTCGIAMDASYPTLSTIN 201
VGYG ++G KYW VKNSWG +WGE GY+++ R DK+G CGIAM+ASYP + N
Sbjct: 291 VGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPIKKSSN 347
>gb|AAA50755.1| cysteine proteinase
Length = 340
Score = 152 bits (384), Expect = 3e-36
Identities = 74/117 (63%), Positives = 84/117 (71%)
Frame = -1
Query: 566 KAAHHAVSISGHEKVPASNEAMLKAAAANQPVSVAIDAGGFLFQLYSGGVFFGFCGKQLN 387
K A HA I+G E VPA++E L A A+QPVSVAIDAGG FQ YS GVF G CG QL+
Sbjct: 223 KQAIHAAEINGFEDVPANSEEALLNAVAHQPVSVAIDAGGSGFQFYSKGVFIGACGTQLD 282
Query: 386 HAVTIVGYGRQVNGPKYWLVKNSWGADWGESGYMKILRDTLDKDGTCGIAMDASYPT 216
H VT VGYG +G KYWLVKNSWG WGE GY+++ RD K+G CGIAM ASYPT
Sbjct: 283 HGVTAVGYGTSDDGTKYWLVKNSWGTQWGEEGYIRMQRDVDAKEGLCGIAMKASYPT 339
>gb|AAC49135.1| SAG12 protein
Length = 346
Score = 151 bits (381), Expect = 6e-36
Identities = 68/113 (60%), Positives = 82/113 (72%)
Frame = -1
Query: 551 AVSISGHEKVPASNEAMLKAAAANQPVSVAIDAGGFLFQLYSGGVFFGFCGKQLNHAVTI 372
A SI+G+E VP ++E L A A+QPVSV I+ GGF FQ YS GVF G C L+HAVT
Sbjct: 234 ATSITGYEDVPVNDEQALMKAVAHQPVSVGIEGGGFDFQFYSSGVFTGECTTYLDHAVTA 293
Query: 371 VGYGRQVNGPKYWLVKNSWGADWGESGYMKILRDTLDKDGTCGIAMDASYPTL 213
+GYG NG KYW++KNSWG WGESGYM+I +D DK G CG+AM ASYPT+
Sbjct: 294 IGYGESTNGSKYWIIKNSWGTKWGESGYMRIQKDVKDKQGLCGLAMKASYPTI 346
>ref|NP_568651.1| senescence-specific cysteine protease SAG12; protein id:
At5g45890.1 [Arabidopsis thaliana]
gi|9758936|dbj|BAB09317.1| senescence-specific cysteine
protease [Arabidopsis thaliana]
gi|13877737|gb|AAK43946.1|AF370131_1 putative
senescence-specific cysteine protease SAG12 [Arabidopsis
thaliana] gi|14532898|gb|AAK64131.1| putative
senescence-specific cysteine protease SAG12 [Arabidopsis
thaliana]
Length = 346
Score = 151 bits (381), Expect = 6e-36
Identities = 68/113 (60%), Positives = 82/113 (72%)
Frame = -1
Query: 551 AVSISGHEKVPASNEAMLKAAAANQPVSVAIDAGGFLFQLYSGGVFFGFCGKQLNHAVTI 372
A SI+G+E VP ++E L A A+QPVSV I+ GGF FQ YS GVF G C L+HAVT
Sbjct: 234 ATSITGYEDVPVNDEQALMKAVAHQPVSVGIEGGGFDFQFYSSGVFTGECTTYLDHAVTA 293
Query: 371 VGYGRQVNGPKYWLVKNSWGADWGESGYMKILRDTLDKDGTCGIAMDASYPTL 213
+GYG NG KYW++KNSWG WGESGYM+I +D DK G CG+AM ASYPT+
Sbjct: 294 IGYGESTNGSKYWIIKNSWGTKWGESGYMRIQKDVKDKQGLCGLAMKASYPTI 346
>gb|AAL14199.1| cysteine proteinase precursor [Ipomoea batatas]
Length = 341
Score = 150 bits (380), Expect = 8e-36
Identities = 70/117 (59%), Positives = 88/117 (74%)
Frame = -1
Query: 566 KAAHHAVSISGHEKVPASNEAMLKAAAANQPVSVAIDAGGFLFQLYSGGVFFGFCGKQLN 387
K+++ A ISG+E VPA++E+ L+ A ANQPVSVAIDAGG FQ YS GVF G CG +L+
Sbjct: 224 KSSNSAAKISGYEDVPANSESALEKAVANQPVSVAIDAGGSDFQFYSSGVFTGECGTELD 283
Query: 386 HAVTIVGYGRQVNGPKYWLVKNSWGADWGESGYMKILRDTLDKDGTCGIAMDASYPT 216
H VT VGYG +G KYWLVKNSWG WGE GY+++ +D K+G CGIAM +SYP+
Sbjct: 284 HGVTAVGYGIAEDGSKYWLVKNSWGTSWGEKGYIRMQKDIEAKEGLCGIAMQSSYPS 340
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 465,005,620
Number of Sequences: 1393205
Number of extensions: 9884455
Number of successful extensions: 28477
Number of sequences better than 10.0: 1101
Number of HSP's better than 10.0 without gapping: 26427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27275
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20669577624
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
