Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019870A_C01 KMC019870A_c01
(564 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O23474|PE40_ARATH Peroxidase 40 precursor (Atperox P40) 144 6e-34
ref|NP_193362.1| peroxidase family; protein id: At4g16270.1 [Ara... 125 3e-28
dbj|BAA06334.1| peroxidase [Populus kitakamiensis] 122 4e-27
ref|NP_195361.1| peroxidase, putative; protein id: At4g36430.1, ... 122 4e-27
pir||T09565 peroxidase (EC 1.11.1.7) - black poplar gi|1199776|d... 121 7e-27
>sp|O23474|PE40_ARATH Peroxidase 40 precursor (Atperox P40)
Length = 348
Score = 144 bits (364), Expect = 6e-34
Identities = 76/134 (56%), Positives = 95/134 (70%), Gaps = 2/134 (1%)
Frame = -2
Query: 560 HTIGKARCSTFSSRLQG--SGDLGSQNMNIDFIASLQQICSVPDNSNQVAQLDLATPATF 387
HT+GKARC++F++RLQ +G + N++F+ SLQQ+CS S + QLDL TP+TF
Sbjct: 217 HTLGKARCTSFTARLQPLQTGQPANHGDNLEFLESLQQLCSTVGPSVGITQLDLVTPSTF 276
Query: 386 DNQYYVNLLSGEGLLQSDQVLVNGNDQTLQIVETYAEDPLAFFEDFKDSMVKMGSLGSLT 207
DNQYYVNLLSGEGLL SDQ L + T IVETYA D FFEDFK++MVKMG +
Sbjct: 277 DNQYYVNLLSGEGLLPSDQALAVQDPGTRAIVETYATDQSVFFEDFKNAMVKMGGIPG-- 334
Query: 206 QSNGQIRTNCRVIN 165
SN +IR NCR+IN
Sbjct: 335 GSNSEIRKNCRMIN 348
>ref|NP_193362.1| peroxidase family; protein id: At4g16270.1 [Arabidopsis thaliana]
gi|7433092|pir||D71429 hypothetical protein -
Arabidopsis thaliana gi|2244985|emb|CAB10406.1|
peroxidase like protein [Arabidopsis thaliana]
gi|7268376|emb|CAB78669.1| peroxidase like protein
[Arabidopsis thaliana]
Length = 355
Score = 125 bits (315), Expect = 3e-28
Identities = 69/123 (56%), Positives = 84/123 (68%), Gaps = 2/123 (1%)
Frame = -2
Query: 527 SSRLQG--SGDLGSQNMNIDFIASLQQICSVPDNSNQVAQLDLATPATFDNQYYVNLLSG 354
S+RLQ +G + N++F+ SLQQ+CS S + QLDL TP+TFDNQYYVNLLSG
Sbjct: 235 SARLQPLQTGQPANHGDNLEFLESLQQLCSTVGPSVGITQLDLVTPSTFDNQYYVNLLSG 294
Query: 353 EGLLQSDQVLVNGNDQTLQIVETYAEDPLAFFEDFKDSMVKMGSLGSLTQSNGQIRTNCR 174
EGLL SDQ L + T IVETYA D FFEDFK++MVKMG + SN +IR NCR
Sbjct: 295 EGLLPSDQALAVQDPGTRAIVETYATDQSVFFEDFKNAMVKMGGIPG--GSNSEIRKNCR 352
Query: 173 VIN 165
+IN
Sbjct: 353 MIN 355
>dbj|BAA06334.1| peroxidase [Populus kitakamiensis]
Length = 314
Score = 122 bits (305), Expect = 4e-27
Identities = 60/137 (43%), Positives = 88/137 (63%), Gaps = 4/137 (2%)
Frame = -2
Query: 563 AHTIGKARCSTFSSRLQGSGDLGSQNMNID--FIASLQQICSVPDNSNQVAQLDLATPAT 390
AHT G+A+CSTF RL G+ + ++D +A+LQ++C N + + LDL TP
Sbjct: 164 AHTFGRAKCSTFDFRLYDFNSTGAPDQSLDPTLLAALQELCPQGGNGSVLTDLDLTTPDA 223
Query: 389 FDNQYYVNLLSGEGLLQSDQVLVN--GNDQTLQIVETYAEDPLAFFEDFKDSMVKMGSLG 216
FD+ YY NL +GLLQ+DQVL + G D + +V ++ + AFFE F +SM++MG+L
Sbjct: 224 FDSNYYSNLQGNQGLLQTDQVLFSTPGADDVIALVNAFSANQTAFFESFAESMIRMGNLR 283
Query: 215 SLTQSNGQIRTNCRVIN 165
LT + G+IR NCRV+N
Sbjct: 284 PLTGTEGEIRLNCRVVN 300
>ref|NP_195361.1| peroxidase, putative; protein id: At4g36430.1, supported by cDNA:
gi_17530561, supported by cDNA: gi_18377685 [Arabidopsis
thaliana] gi|26397550|sp|O23237|PE49_ARATH Peroxidase 49
precursor (Atperox P49) (ATP31) gi|25285608|pir||A85430
peroxidase like protein [imported] - Arabidopsis
thaliana gi|4006918|emb|CAB16848.1| peroxidase like
protein [Arabidopsis thaliana]
gi|6822093|emb|CAB71009.1| peroxidase [Arabidopsis
thaliana] gi|7270591|emb|CAB80309.1| peroxidase like
protein [Arabidopsis thaliana]
gi|17530562|gb|AAL40848.1|AF452384_1 class III
peroxidase ATP31 [Arabidopsis thaliana]
gi|18377686|gb|AAL66993.1| putative peroxidase
[Arabidopsis thaliana] gi|21436133|gb|AAM51313.1|
putative peroxidase [Arabidopsis thaliana]
Length = 331
Score = 122 bits (305), Expect = 4e-27
Identities = 60/135 (44%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Frame = -2
Query: 563 AHTIGKARCSTFSSRLQGSGDLGSQNMNID--FIASLQQICSVPDNSNQVAQLDLATPAT 390
+HTIG +RC++F RL GS +M ++ F A+L+Q C ++ LD+ + A+
Sbjct: 196 SHTIGFSRCTSFRQRLYNQSGNGSPDMTLEQSFAANLRQRCPKSGGDQILSVLDIISAAS 255
Query: 389 FDNQYYVNLLSGEGLLQSDQVLVNGNDQTLQIVETYAEDPLAFFEDFKDSMVKMGSLGSL 210
FDN Y+ NL+ +GLL SDQVL + N+++ ++V+ YAED FFE F +SM+KMG++ L
Sbjct: 256 FDNSYFKNLIENKGLLNSDQVLFSSNEKSRELVKKYAEDQGEFFEQFAESMIKMGNISPL 315
Query: 209 TQSNGQIRTNCRVIN 165
T S+G+IR NCR IN
Sbjct: 316 TGSSGEIRKNCRKIN 330
>pir||T09565 peroxidase (EC 1.11.1.7) - black poplar gi|1199776|dbj|BAA11852.1|
peroxidase [Populus nigra]
Length = 343
Score = 121 bits (303), Expect = 7e-27
Identities = 60/137 (43%), Positives = 86/137 (61%), Gaps = 4/137 (2%)
Frame = -2
Query: 563 AHTIGKARCSTFSSRLQGSGDLGS--QNMNIDFIASLQQICSVPDNSNQVAQLDLATPAT 390
AHT G+A+CSTF RL G+ Q++N +A LQ++C N + + LDL TP
Sbjct: 193 AHTFGRAKCSTFDFRLFDFNSTGAPDQSLNTTLLADLQELCPQGGNGSVITDLDLTTPDA 252
Query: 389 FDNQYYVNLLSGEGLLQSDQVLVN--GNDQTLQIVETYAEDPLAFFEDFKDSMVKMGSLG 216
FD+ YY NL +GLLQ+DQ L + G D + +V ++ + AFFE F +SM++MG+L
Sbjct: 253 FDSNYYSNLQGNQGLLQTDQELFSTPGADDVIALVNAFSANQTAFFESFAESMIRMGNLS 312
Query: 215 SLTQSNGQIRTNCRVIN 165
LT + G+IR NCRV+N
Sbjct: 313 PLTGTEGEIRLNCRVVN 329
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 441,246,929
Number of Sequences: 1393205
Number of extensions: 8965924
Number of successful extensions: 22753
Number of sequences better than 10.0: 527
Number of HSP's better than 10.0 without gapping: 21193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22053
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20382500157
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
