Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019868A_C01 KMC019868A_c01
(485 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL99608.1|AF348412_1 cytosolic aldehyde dehydrogenase RF2C [... 206 1e-52
gb|AAL99609.1|AF348413_1 cytosolic aldehyde dehydrogenase RF2C [... 206 1e-52
dbj|BAA96794.1| cytosolic aldehyde dehydrogenase [Oryza sativa (... 200 6e-51
dbj|BAB55808.1| putative cytosolic aldehyde dehydrogenase [Oryza... 190 8e-48
gb|AAL99611.1|AF348415_1 cytosolic aldehyde dehydrogenase RF2D [... 188 2e-47
>gb|AAL99608.1|AF348412_1 cytosolic aldehyde dehydrogenase RF2C [Zea mays]
Length = 502
Score = 206 bits (524), Expect = 1e-52
Identities = 94/124 (75%), Positives = 110/124 (87%)
Frame = -1
Query: 485 GYYIGPTIFSNVKEDMVIAKDEIFGPVMVLSKFKIIEEAIEKANSTRYGLAAGIVTKNLD 306
GYYI PTIF++VK+DM IA+DEIFGPVM L KFK +EE I+KAN+TRYGLAAGIVTKN+D
Sbjct: 379 GYYIEPTIFTDVKDDMTIAQDEIFGPVMALMKFKTVEEVIQKANNTRYGLAAGIVTKNID 438
Query: 305 IANTVSRSIRAGIIWINCFFALDIDCPFGGYKMSGFGRDYGLEALHKYLQVKSVATPIYN 126
+ANTVSRSIRAG IWINC+FA D D PFGGYKMSGFG+D G++AL KYLQ K+V TP+YN
Sbjct: 439 VANTVSRSIRAGAIWINCYFAFDPDAPFGGYKMSGFGKDMGMDALDKYLQTKTVVTPLYN 498
Query: 125 SPWL 114
+PWL
Sbjct: 499 TPWL 502
>gb|AAL99609.1|AF348413_1 cytosolic aldehyde dehydrogenase RF2C [Zea mays]
Length = 503
Score = 206 bits (524), Expect = 1e-52
Identities = 94/124 (75%), Positives = 110/124 (87%)
Frame = -1
Query: 485 GYYIGPTIFSNVKEDMVIAKDEIFGPVMVLSKFKIIEEAIEKANSTRYGLAAGIVTKNLD 306
GYYI PTIF++VK+DM IA+DEIFGPVM L KFK +EE I+KAN+TRYGLAAGIVTKN+D
Sbjct: 380 GYYIEPTIFTDVKDDMTIAQDEIFGPVMALMKFKTVEEVIQKANNTRYGLAAGIVTKNID 439
Query: 305 IANTVSRSIRAGIIWINCFFALDIDCPFGGYKMSGFGRDYGLEALHKYLQVKSVATPIYN 126
+ANTVSRSIRAG IWINC+FA D D PFGGYKMSGFG+D G++AL KYLQ K+V TP+YN
Sbjct: 440 VANTVSRSIRAGAIWINCYFAFDPDAPFGGYKMSGFGKDMGMDALDKYLQTKTVVTPLYN 499
Query: 125 SPWL 114
+PWL
Sbjct: 500 TPWL 503
>dbj|BAA96794.1| cytosolic aldehyde dehydrogenase [Oryza sativa (japonica
cultivar-group)] gi|14164407|dbj|BAB55806.1| cytosolic
aldehyde dehydrogenase [Oryza sativa (japonica
cultivar-group)]
Length = 502
Score = 200 bits (509), Expect = 6e-51
Identities = 92/124 (74%), Positives = 108/124 (86%)
Frame = -1
Query: 485 GYYIGPTIFSNVKEDMVIAKDEIFGPVMVLSKFKIIEEAIEKANSTRYGLAAGIVTKNLD 306
GYYI PTIF++VKE+M IA++EIFGPVM L KFK +EEAI+KANSTRYGLAAGIVTKN+D
Sbjct: 379 GYYIEPTIFTDVKEEMSIAQEEIFGPVMALMKFKTVEEAIQKANSTRYGLAAGIVTKNID 438
Query: 305 IANTVSRSIRAGIIWINCFFALDIDCPFGGYKMSGFGRDYGLEALHKYLQVKSVATPIYN 126
+ANTVSRSIRAG IWINC+ D D PFGGYKMSGFG+D G++AL KYL K+V TP+YN
Sbjct: 439 VANTVSRSIRAGAIWINCYLGFDPDVPFGGYKMSGFGKDMGMDALEKYLHTKAVVTPLYN 498
Query: 125 SPWL 114
+PWL
Sbjct: 499 TPWL 502
>dbj|BAB55808.1| putative cytosolic aldehyde dehydrogenase [Oryza sativa (japonica
cultivar-group)]
Length = 507
Score = 190 bits (482), Expect = 8e-48
Identities = 89/123 (72%), Positives = 105/123 (85%)
Frame = -1
Query: 485 GYYIGPTIFSNVKEDMVIAKDEIFGPVMVLSKFKIIEEAIEKANSTRYGLAAGIVTKNLD 306
GYYI PTIF +VKE+M IA++EIFGPVM L KFK +EEAIEKAN T+YGLAAGIVTKNL+
Sbjct: 384 GYYIEPTIFVDVKEEMTIAQEEIFGPVMSLMKFKTVEEAIEKANCTKYGLAAGIVTKNLN 443
Query: 305 IANTVSRSIRAGIIWINCFFALDIDCPFGGYKMSGFGRDYGLEALHKYLQVKSVATPIYN 126
IAN VSRS+RAG +W+NC+FA D D PFGGYKMSGFGRD G+ A+ KYLQVK+V T + +
Sbjct: 444 IANMVSRSVRAGTVWVNCYFAFDPDAPFGGYKMSGFGRDQGMVAMDKYLQVKTVITAVPD 503
Query: 125 SPW 117
SPW
Sbjct: 504 SPW 506
>gb|AAL99611.1|AF348415_1 cytosolic aldehyde dehydrogenase RF2D [Zea mays]
Length = 511
Score = 188 bits (478), Expect = 2e-47
Identities = 89/123 (72%), Positives = 103/123 (83%)
Frame = -1
Query: 485 GYYIGPTIFSNVKEDMVIAKDEIFGPVMVLSKFKIIEEAIEKANSTRYGLAAGIVTKNLD 306
GYYI PTIF +V EDM IA++EIFGPVM L KFK ++E IEKAN TRYGLAAGIVTK+LD
Sbjct: 388 GYYIEPTIFVDVTEDMKIAQEEIFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLD 447
Query: 305 IANTVSRSIRAGIIWINCFFALDIDCPFGGYKMSGFGRDYGLEALHKYLQVKSVATPIYN 126
+AN VSRS+RAG +W+NC+FA D D PFGGYKMSGFGRD GL A+ KYLQVKSV T + +
Sbjct: 448 VANRVSRSVRAGTVWVNCYFAFDPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPD 507
Query: 125 SPW 117
SPW
Sbjct: 508 SPW 510
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 413,512,509
Number of Sequences: 1393205
Number of extensions: 8479610
Number of successful extensions: 24930
Number of sequences better than 10.0: 1350
Number of HSP's better than 10.0 without gapping: 23735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24493
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 13980339936
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
