Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019863A_C01 KMC019863A_c01
(512 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_189579.1| hypothetical protein; protein id: At3g29330.1 [... 78 7e-14
gb|AAK92570.1|AC074354_4 Hypothetical protein [Oryza sativa] 72 5e-12
ref|NP_200927.1| putative protein; protein id: At5g61190.1 [Arab... 51 9e-06
dbj|BAB10381.1| emb|CAB71880.1~gene_id:MAF19.19~similar to unkno... 43 0.002
ref|NP_179981.1| hypothetical protein; protein id: At2g24030.1 [... 37 0.10
>ref|NP_189579.1| hypothetical protein; protein id: At3g29330.1 [Arabidopsis
thaliana]
Length = 232
Score = 77.8 bits (190), Expect = 7e-14
Identities = 36/74 (48%), Positives = 50/74 (66%), Gaps = 4/74 (5%)
Frame = -2
Query: 448 PIIGPLEKPGSDKPRK----APEMDIETKKRKIVEGGAAEAAVRLCDLCNVVCNSEKVFN 281
P+IGP E P + K RK + D+E+K+R++VE G + ++RLC +CNVVCNS+ V+N
Sbjct: 151 PLIGPQENPCTSKARKRGADSTTEDLESKRRRVVECGVSNESIRLCRICNVVCNSDIVYN 210
Query: 280 THLVGHKHAAMVKK 239
HL G KHAA K
Sbjct: 211 DHLAGQKHAAKAAK 224
>gb|AAK92570.1|AC074354_4 Hypothetical protein [Oryza sativa]
Length = 421
Score = 71.6 bits (174), Expect = 5e-12
Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 19/114 (16%)
Frame = -2
Query: 511 KNLEKL------------SKPETGVGASAAPANPI-------IGPLEKPGSDKPRKAPEM 389
KNLE+L S P T A+ +P+ + P + K A
Sbjct: 304 KNLERLQDSITPKPVKPPSTPNTVALAANMAPDPVTTSVTTSVIPAAQTKKKKSAAATPE 363
Query: 388 DIETKKRKIVEGGAAEAAVRLCDLCNVVCNSEKVFNTHLVGHKHAAMVKKKQAE 227
++E K+R++++ GAA+ V++C +CNVV NS+KV+ H++G KH AMV+K+QA+
Sbjct: 364 ELEVKRRRVLDAGAAQGEVKICTVCNVVVNSQKVYEFHIIGQKHKAMVQKQQAQ 417
>ref|NP_200927.1| putative protein; protein id: At5g61190.1 [Arabidopsis thaliana]
Length = 976
Score = 50.8 bits (120), Expect = 9e-06
Identities = 29/79 (36%), Positives = 41/79 (51%)
Frame = -2
Query: 466 SAAPANPIIGPLEKPGSDKPRKAPEMDIETKKRKIVEGGAAEAAVRLCDLCNVVCNSEKV 287
S N ++GP E P K K+ ++E A A +C +CNVVC S+ V
Sbjct: 329 SGKSKNILVGPAE------PSKEVLEKHNMNKKVMIESRAQANAEFVCLMCNVVCQSQIV 382
Query: 286 FNTHLVGHKHAAMVKKKQA 230
FN+HL G KHA M+ + +A
Sbjct: 383 FNSHLRGKKHANMLSQSEA 401
Score = 42.7 bits (99), Expect = 0.002
Identities = 30/97 (30%), Positives = 45/97 (45%), Gaps = 10/97 (10%)
Frame = -2
Query: 475 VGASAAPANPIIGPLEKPGSDKPRKAPEMDI------ETKKRKIVEG-GAAEAAVRLCDL 317
V A P+ P G G K K E + E +K + GA + C +
Sbjct: 189 VSEQAQPSQPT-GSTSNAGDTKDHKTREKHVPRGSLQENRKNMLQHSSGATGESATTCRI 247
Query: 316 CNVVCNSEKVFNTHLVGHKH---AAMVKKKQAESSTS 215
CNVVC+S + F HL +H AA+V+ ++A++S S
Sbjct: 248 CNVVCDSFEKFTAHLSDIRHISQAAIVESRRAQASVS 284
Score = 34.3 bits (77), Expect = 0.87
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -2
Query: 325 CDLCNVVCNSEKVFNTHLVGHKHAAMVKKKQAESST 218
C +C + CNS+ F +H G KH ++ + A++ T
Sbjct: 684 CQVCQISCNSKVAFASHTYGKKHRQNLESQSAKNET 719
>dbj|BAB10381.1| emb|CAB71880.1~gene_id:MAF19.19~similar to unknown protein
[Arabidopsis thaliana]
Length = 996
Score = 43.1 bits (100), Expect = 0.002
Identities = 22/60 (36%), Positives = 34/60 (56%)
Frame = -2
Query: 409 PRKAPEMDIETKKRKIVEGGAAEAAVRLCDLCNVVCNSEKVFNTHLVGHKHAAMVKKKQA 230
P K E+ + K+ + +A+ +C +CNV C+S VF THL G KHAA + + +A
Sbjct: 441 PEKGDEVKGQPKEMTALRNASAKY---ICRMCNVGCHSPIVFETHLRGQKHAANLNQSKA 497
Score = 42.7 bits (99), Expect = 0.002
Identities = 30/97 (30%), Positives = 45/97 (45%), Gaps = 10/97 (10%)
Frame = -2
Query: 475 VGASAAPANPIIGPLEKPGSDKPRKAPEMDI------ETKKRKIVEG-GAAEAAVRLCDL 317
V A P+ P G G K K E + E +K + GA + C +
Sbjct: 189 VSEQAQPSQPT-GSTSNAGDTKDHKTREKHVPRGSLQENRKNMLQHSSGATGESATTCRI 247
Query: 316 CNVVCNSEKVFNTHLVGHKH---AAMVKKKQAESSTS 215
CNVVC+S + F HL +H AA+V+ ++A++S S
Sbjct: 248 CNVVCDSFEKFTAHLSDIRHISQAAIVESRRAQASVS 284
Score = 42.0 bits (97), Expect = 0.004
Identities = 27/80 (33%), Positives = 37/80 (45%)
Frame = -2
Query: 466 SAAPANPIIGPLEKPGSDKPRKAPEMDIETKKRKIVEGGAAEAAVRLCDLCNVVCNSEKV 287
S N ++GP E P K K+ ++E A A +C +CNVVC S+ V
Sbjct: 329 SGKSKNILVGPAE------PSKEVLEKHNMNKKVMIESRAQANAEFVCLMCNVVCQSQIV 382
Query: 286 FNTHLVGHKHAAMVKKKQAE 227
FN+HL A +V K E
Sbjct: 383 FNSHLRALDQALIVSTKLQE 402
Score = 34.3 bits (77), Expect = 0.87
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -2
Query: 325 CDLCNVVCNSEKVFNTHLVGHKHAAMVKKKQAESST 218
C +C + CNS+ F +H G KH ++ + A++ T
Sbjct: 704 CQVCQISCNSKVAFASHTYGKKHRQNLESQSAKNET 739
>ref|NP_179981.1| hypothetical protein; protein id: At2g24030.1 [Arabidopsis
thaliana] gi|25412186|pir||G84631 hypothetical protein
At2g24030 [imported] - Arabidopsis thaliana
gi|3738330|gb|AAC63671.1| hypothetical protein
[Arabidopsis thaliana]
Length = 440
Score = 37.4 bits (85), Expect = 0.10
Identities = 17/58 (29%), Positives = 29/58 (49%)
Frame = -2
Query: 406 RKAPEMDIETKKRKIVEGGAAEAAVRLCDLCNVVCNSEKVFNTHLVGHKHAAMVKKKQ 233
+K E+ + K +G + C CN+ NSE+ H +G KH A+++K+Q
Sbjct: 345 QKVDEIAAKETTGKKTKGEKKKKETVWCKTCNIQTNSEQTMRNHTLGKKHMALLEKQQ 402
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 428,434,135
Number of Sequences: 1393205
Number of extensions: 8722537
Number of successful extensions: 27717
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 26566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27709
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 16232377112
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
