Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019834A_C01 KMC019834A_c01
(589 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_188515.1| hypothetical protein; protein id: At3g18850.1, ... 70 2e-11
dbj|BAB92544.1| putative acyl-CoA:1-acylglycerol-3-phosphate acy... 67 2e-10
ref|NP_565098.1| putative acyl-CoA:1-acylglycerol-3-phosphate ac... 52 7e-06
ref|XP_230116.1| similar to olfactory receptor MOR179-1 [Mus mus... 33 2.0
dbj|BAA81694.1| G protein a subunit 2 [Hydra magnipapillata] 33 3.5
>ref|NP_188515.1| hypothetical protein; protein id: At3g18850.1, supported by cDNA:
gi_20466765 [Arabidopsis thaliana]
gi|9294694|dbj|BAB03094.1|
acyl-CoA:1-acylglycerol-3-phosphate acyltransferase
[Arabidopsis thaliana] gi|20466766|gb|AAM20700.1|
unknown protein [Arabidopsis thaliana]
Length = 375
Score = 70.5 bits (171), Expect = 2e-11
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Frame = -2
Query: 588 LLANFQFQGQFPDQITERDLFAVKNILNCMTVVMLTGTCMYCIFSSS--WFKLYVSIVCA 415
LL +F G FP++ TE++ K ++NC+ V+ T C + F SS WF++YVS+ C
Sbjct: 288 LLNDFYSNGHFPNEGTEKEFNTKKYLINCLAVIAFTTICTHLTFFSSMIWFRIYVSLACV 347
Query: 414 YLVPATYFNIRPQPILGLLK 355
YL AT+FN+R P++ K
Sbjct: 348 YLTSATHFNLRSVPLVETAK 367
>dbj|BAB92544.1| putative acyl-CoA:1-acylglycerol-3-phosphate acyltransferase [Oryza
sativa (japonica cultivar-group)]
Length = 399
Score = 67.0 bits (162), Expect = 2e-10
Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = -2
Query: 588 LLANFQFQGQFPDQITERDLFAVKNILNCMTVVMLTGTCMYC-IFSSSWFKLYVSIVCAY 412
LL++F QG FPD+ TE D+ + + N + +V TG +Y +FSS WFK+YV + CAY
Sbjct: 312 LLSDFFMQGHFPDEGTEGDVSTPECLANFIAIVSSTGFFLYLSLFSSVWFKVYVLLSCAY 371
Query: 411 LVPATYFNIRPQPIL 367
L TYF+I+P ++
Sbjct: 372 LTFVTYFSIQPPQLI 386
>ref|NP_565098.1| putative acyl-CoA:1-acylglycerol-3-phosphate acyltransferase;
protein id: At1g75020.1, supported by cDNA: 115679.,
supported by cDNA: gi_20466162 [Arabidopsis thaliana]
gi|20466163|gb|AAM20399.1| putative
acyl-CoA:1-acylglycerol-3-phosphate acyltransferase
[Arabidopsis thaliana] gi|21536942|gb|AAM61283.1|
putative acyl-CoA:1-acylglycerol-3-phosphate
acyltransferase [Arabidopsis thaliana]
gi|24899817|gb|AAN65123.1| putative
acyl-CoA:1-acylglycerol-3-phosphate acyltransferase
[Arabidopsis thaliana]
Length = 378
Score = 51.6 bits (122), Expect = 7e-06
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = -2
Query: 588 LLANFQFQGQFPDQITERDLFAVKNILNCMTVVMLTGTCMY-CIFSSSWFKLYVSIVCAY 412
LL++F QG+FP+Q E +L +K I V+ LT +Y ++S S FK+Y + Y
Sbjct: 293 LLSDFNAQGKFPNQRPEEELSVLKCIATFAGVISLTVVFIYLTLYSHSCFKVYACLSGTY 352
Query: 411 LVPATYFNIRPQP 373
L ATY+ +P P
Sbjct: 353 LTFATYYKFQPSP 365
>ref|XP_230116.1| similar to olfactory receptor MOR179-1 [Mus musculus] [Rattus
norvegicus]
Length = 315
Score = 33.5 bits (75), Expect = 2.0
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 19/111 (17%)
Frame = -2
Query: 276 CNISTGLAITCNYIHLNSCRIKFW---------LMVLFLIAFL*GNKSLAILFRNFCSGR 124
C+I LAI+C+ ++N + F+ L+VL AF+ L+IL N GR
Sbjct: 177 CDIPPLLAISCSETYINELLLFFFVSFIELVTILIVLISYAFI----LLSILKMNSSEGR 232
Query: 123 ---FDIC-AYLFMETSVSILQF*CFDSLLFYLIHNVHVN------SWHSLP 1
F C A+L T+VSI + ++LF L H V N +WH +P
Sbjct: 233 RKVFSTCGAHL---TAVSIF----YGTILFILYHVVTYNQDVSEVTWHPVP 276
>dbj|BAA81694.1| G protein a subunit 2 [Hydra magnipapillata]
Length = 305
Score = 32.7 bits (73), Expect = 3.5
Identities = 24/56 (42%), Positives = 32/56 (56%), Gaps = 3/56 (5%)
Frame = +2
Query: 71 NCKIETEVSIKRYAQMSNLPEQKLRN--NIAKDLFP*RKA-MRNKTISQNLILQLF 229
N K T+VSI + ++L EQK+RN N KD FP + N + QN ILQ+F
Sbjct: 204 NNKCFTKVSIILFLNKTDLLEQKIRNRHNSIKDFFPQFQGDPYNLSDVQNFILQMF 259
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 463,161,688
Number of Sequences: 1393205
Number of extensions: 9243865
Number of successful extensions: 25882
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 25483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25876
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22283372436
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
