Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019825A_C01 KMC019825A_c01
(479 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA81904.1| NtPRp27 [Nicotiana tabacum] 150 7e-36
emb|CAC40754.1| putative NtPRp27-like protein [Atropa belladonna] 150 9e-36
ref|NP_565369.1| expressed protein; protein id: At2g15220.1, sup... 149 2e-35
ref|NP_179117.1| hypothetical protein; protein id: At2g15130.1 [... 148 3e-35
gb|AAO22065.1| NtPRp27-like protein [Solanum tuberosum] 146 1e-34
>dbj|BAA81904.1| NtPRp27 [Nicotiana tabacum]
Length = 242
Score = 150 bits (379), Expect = 7e-36
Identities = 69/98 (70%), Positives = 81/98 (82%)
Frame = -1
Query: 479 DGNGQAPSGLIEGIADFVRLKAGYAPLDLWVPPGGGDKWDQGYDVTARFLDYCNSIRNGF 300
+GNG AP GLIEGIAD+VRLKAG+AP WV PG GD+WDQGYDVTARFLDYCNS+RNGF
Sbjct: 146 NGNGGAPGGLIEGIADYVRLKAGFAPSH-WVKPGQGDRWDQGYDVTARFLDYCNSLRNGF 204
Query: 299 VGELNKKMKSSYSETYFTQLLGKSVTQLWTGYKANYAA 186
V +LNKKM++ YS +F LLGK+V QLW+ YKA + A
Sbjct: 205 VAQLNKKMRTGYSNQFFIDLLGKTVDQLWSDYKAKFRA 242
>emb|CAC40754.1| putative NtPRp27-like protein [Atropa belladonna]
Length = 223
Score = 150 bits (378), Expect = 9e-36
Identities = 68/98 (69%), Positives = 82/98 (83%)
Frame = -1
Query: 479 DGNGQAPSGLIEGIADFVRLKAGYAPLDLWVPPGGGDKWDQGYDVTARFLDYCNSIRNGF 300
+GNG+AP GLIEGIAD+VRLKAG AP WV PG GD+WDQGYDVTARFLDYCNS++NGF
Sbjct: 122 NGNGRAPGGLIEGIADYVRLKAGLAPSH-WVKPGQGDRWDQGYDVTARFLDYCNSLKNGF 180
Query: 299 VGELNKKMKSSYSETYFTQLLGKSVTQLWTGYKANYAA 186
V +LNKKM++ YS +F +LLGK+V QLW+ YKA + A
Sbjct: 181 VAQLNKKMRNGYSNQFFVELLGKTVDQLWSDYKAKFRA 218
>ref|NP_565369.1| expressed protein; protein id: At2g15220.1, supported by cDNA:
gi_13569549, supported by cDNA: gi_19699335 [Arabidopsis
thaliana] gi|25350201|pir||D84526 hypothetical protein
At2g15220 [imported] - Arabidopsis thaliana
gi|4585909|gb|AAD25570.1| expressed protein [Arabidopsis
thaliana] gi|13569550|gb|AAK31145.1|AF345341_1 unknown
[Arabidopsis thaliana] gi|19699336|gb|AAL91278.1|
At2g15220/F15A23.4 [Arabidopsis thaliana]
Length = 225
Score = 149 bits (376), Expect = 2e-35
Identities = 69/96 (71%), Positives = 78/96 (80%)
Frame = -1
Query: 479 DGNGQAPSGLIEGIADFVRLKAGYAPLDLWVPPGGGDKWDQGYDVTARFLDYCNSIRNGF 300
+G G+AP GLIEGIAD+VRLKAGYAP WV PG GD+WDQGYDVTARFLDYCN +RNGF
Sbjct: 129 NGAGRAPGGLIEGIADYVRLKAGYAPSH-WVGPGRGDRWDQGYDVTARFLDYCNGLRNGF 187
Query: 299 VGELNKKMKSSYSETYFTQLLGKSVTQLWTGYKANY 192
V ELNKKM++ YS+ +F LLGK V QLW YKA Y
Sbjct: 188 VAELNKKMRNGYSDGFFVDLLGKDVNQLWREYKAKY 223
>ref|NP_179117.1| hypothetical protein; protein id: At2g15130.1 [Arabidopsis
thaliana] gi|25350203|pir||D84525 hypothetical protein
At2g15130 [imported] - Arabidopsis thaliana
gi|4585916|gb|AAD25577.1| hypothetical protein
[Arabidopsis thaliana] gi|20197492|gb|AAM15095.1|
hypothetical protein [Arabidopsis thaliana]
Length = 225
Score = 148 bits (374), Expect = 3e-35
Identities = 68/96 (70%), Positives = 78/96 (80%)
Frame = -1
Query: 479 DGNGQAPSGLIEGIADFVRLKAGYAPLDLWVPPGGGDKWDQGYDVTARFLDYCNSIRNGF 300
+G G+AP GLIEGIAD+VRLKAGY WV PGGGD+WDQGYDVTARFL+YCN +RNGF
Sbjct: 129 NGAGRAPGGLIEGIADYVRLKAGYVASH-WVRPGGGDRWDQGYDVTARFLEYCNDLRNGF 187
Query: 299 VGELNKKMKSSYSETYFTQLLGKSVTQLWTGYKANY 192
V ELNKKM+S Y++ +F LLGK V QLW YKANY
Sbjct: 188 VAELNKKMRSDYNDGFFVDLLGKDVNQLWREYKANY 223
>gb|AAO22065.1| NtPRp27-like protein [Solanum tuberosum]
Length = 226
Score = 146 bits (369), Expect = 1e-34
Identities = 67/98 (68%), Positives = 80/98 (81%)
Frame = -1
Query: 479 DGNGQAPSGLIEGIADFVRLKAGYAPLDLWVPPGGGDKWDQGYDVTARFLDYCNSIRNGF 300
+GNG AP GLIEGIAD+VRLKAG P WV PG G++WDQGYDVTA+FLDYCNS+RNGF
Sbjct: 130 NGNGGAPGGLIEGIADYVRLKAGLGPSH-WVKPGQGNRWDQGYDVTAQFLDYCNSLRNGF 188
Query: 299 VGELNKKMKSSYSETYFTQLLGKSVTQLWTGYKANYAA 186
V ELNKKM++ YS+ +F LLGK+V QLW+ YKA + A
Sbjct: 189 VAELNKKMRNGYSDQFFVDLLGKTVDQLWSDYKAKFGA 226
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 381,782,997
Number of Sequences: 1393205
Number of extensions: 7589164
Number of successful extensions: 16997
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 16578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16963
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 13397825772
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
