Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019804A_C01 KMC019804A_c01
(518 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA34247.1| GPI-anchored protein [Vigna radiata] 154 4e-37
ref|NP_200428.1| putative protein; protein id: At5g56170.1 [Arab... 111 6e-24
ref|NP_179662.1| hypothetical protein; protein id: At2g20700.1 [... 102 3e-21
ref|NP_194557.1| putative GPI-anchored protein; protein id: At4g... 99 4e-20
emb|CAC09509.1| hypothetical protein [Oryza sativa (indica culti... 60 1e-08
>dbj|BAA34247.1| GPI-anchored protein [Vigna radiata]
Length = 169
Score = 154 bits (390), Expect = 4e-37
Identities = 71/88 (80%), Positives = 77/88 (86%)
Frame = -1
Query: 518 GAFKEFACPYVDVLNDLTNDCASTMFSYINLYGKYPPGLFAHECREGKEGLACPALPPSA 339
GAFKEFACPY DVLNDLTN+CASTMFSYINLYGKYPPGLFA EC + K GL CPALPPS
Sbjct: 82 GAFKEFACPYADVLNDLTNECASTMFSYINLYGKYPPGLFASECHDTKRGLECPALPPSV 141
Query: 338 LADDTSSQVVHFPSLVLVLTACFLILLF 255
ADDTS+Q +H PSL+L+LT CFLILLF
Sbjct: 142 SADDTSNQFLHCPSLLLLLTTCFLILLF 169
>ref|NP_200428.1| putative protein; protein id: At5g56170.1 [Arabidopsis thaliana]
gi|9758637|dbj|BAB09299.1| contains similarity to
GPI-anchored protein~gene_id:MDA7.23 [Arabidopsis
thaliana] gi|23306374|gb|AAN17414.1| putative protein
[Arabidopsis thaliana] gi|24899659|gb|AAN65044.1|
putative protein [Arabidopsis thaliana]
Length = 168
Score = 111 bits (277), Expect = 6e-24
Identities = 53/90 (58%), Positives = 67/90 (73%), Gaps = 3/90 (3%)
Frame = -1
Query: 518 GAFKEFACPYVDVLNDLTNDCASTMFSYINLYGKYPPGLFAHECREGKEGLACPA---LP 348
GAFK+FACPY D LNDL++DCA+TMFSYINLYGKYPPGLFA++C+EGKEGL CPA LP
Sbjct: 77 GAFKDFACPYTDQLNDLSSDCATTMFSYINLYGKYPPGLFANQCKEGKEGLECPAGSQLP 136
Query: 347 PSALADDTSSQVVHFPSLVLVLTACFLILL 258
P A + ++ L L ++A L+ +
Sbjct: 137 PETSA-EVNAATTSSSRLWLTVSAALLVFV 165
>ref|NP_179662.1| hypothetical protein; protein id: At2g20700.1 [Arabidopsis
thaliana] gi|25337807|pir||C84592 hypothetical protein
At2g20700 [imported] - Arabidopsis thaliana
gi|4454478|gb|AAD20925.1| hypothetical protein
[Arabidopsis thaliana]
Length = 181
Score = 102 bits (254), Expect = 3e-21
Identities = 51/88 (57%), Positives = 63/88 (70%), Gaps = 1/88 (1%)
Frame = -1
Query: 515 AFKEFACPYVDVLNDLTNDCASTMFSYINLYGKYPPGLFAHECREGKEGLACPALPPSAL 336
AFK+FACP+ +VLND NDCASTMFSYINLYG+YPPG+FA+ C+EGKEGL C + SA
Sbjct: 91 AFKDFACPFAEVLNDEKNDCASTMFSYINLYGRYPPGIFANMCKEGKEGLDCTDVTQSAS 150
Query: 335 A-DDTSSQVVHFPSLVLVLTACFLILLF 255
A D+ + SL ++ T L LLF
Sbjct: 151 ATSDSIPRASTTASLAVLSTFLVLCLLF 178
>ref|NP_194557.1| putative GPI-anchored protein; protein id: At4g28280.1 [Arabidopsis
thaliana] gi|7460059|pir||T09044 hypothetical protein
F26K10.160 - Arabidopsis thaliana
gi|7269682|emb|CAB79630.1| putative GPI-anchored protein
[Arabidopsis thaliana]
Length = 160
Score = 98.6 bits (244), Expect = 4e-20
Identities = 50/90 (55%), Positives = 61/90 (67%), Gaps = 3/90 (3%)
Frame = -1
Query: 515 AFKEFACPYVDVLNDLTNDCASTMFSYINLYGKYPPGLFAHECREGKEGLACPALPPSAL 336
AFK+FACP+ +VLND DCASTMFSYINLYG+YPPG+FA+ C+EGKEGL C + P
Sbjct: 77 AFKDFACPFAEVLNDEKTDCASTMFSYINLYGRYPPGIFANMCKEGKEGLDCTDVTP--- 133
Query: 335 ADDTSSQVVHFPSL---VLVLTACFLILLF 255
TSS P + VL++T L LF
Sbjct: 134 ---TSSSHASIPLVSTHVLLITVSILFHLF 160
>emb|CAC09509.1| hypothetical protein [Oryza sativa (indica cultivar-group)]
Length = 149
Score = 60.5 bits (145), Expect = 1e-08
Identities = 25/52 (48%), Positives = 33/52 (63%)
Frame = -1
Query: 515 AFKEFACPYVDVLNDLTNDCASTMFSYINLYGKYPPGLFAHECREGKEGLAC 360
AFK FACP+ ++ND+ N CA MF I+ YG+ PPG +C EG G+ C
Sbjct: 98 AFKTFACPHNKLINDVNNGCADEMFYTIHTYGQLPPGTIFKKCLEGPHGMKC 149
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 412,517,571
Number of Sequences: 1393205
Number of extensions: 8173182
Number of successful extensions: 17187
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 16830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17186
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16442828304
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
