Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019801A_C01 KMC019801A_c01
(477 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG28503.1|AF196966_1 hexokinase [Citrus sinensis] 52 2e-06
sp|Q9SEK3|HXK1_SPIOL Hexokinase 1 gi|6594672|gb|AAF18584.1|AF118... 52 3e-06
gb|AAL60583.1|AF454961_1 hexokinase [Brassica oleracea] 47 8e-05
emb|CAC81350.1| hexokinase [Lycopersicon esculentum] 47 1e-04
sp|Q9SEK2|HXK1_TOBAC Hexokinase 1 gi|6594674|gb|AAF18585.1|AF118... 47 1e-04
>gb|AAG28503.1|AF196966_1 hexokinase [Citrus sinensis]
Length = 498
Score = 52.4 bits (124), Expect = 2e-06
Identities = 25/27 (92%), Positives = 27/27 (99%)
Frame = -3
Query: 475 SVVIEHSHDGSGIGAALLAASHSQYLE 395
+VVIEHS+DGSGIGAALLAASHSQYLE
Sbjct: 468 TVVIEHSNDGSGIGAALLAASHSQYLE 494
>sp|Q9SEK3|HXK1_SPIOL Hexokinase 1 gi|6594672|gb|AAF18584.1|AF118132_1 chloroplast outer
envelope hexokinase 1 [Spinacia oleracea]
Length = 498
Score = 52.0 bits (123), Expect = 3e-06
Identities = 24/27 (88%), Positives = 27/27 (99%)
Frame = -3
Query: 475 SVVIEHSHDGSGIGAALLAASHSQYLE 395
++VIEHS+DGSGIGAALLAASHSQYLE
Sbjct: 468 TIVIEHSNDGSGIGAALLAASHSQYLE 494
>gb|AAL60583.1|AF454961_1 hexokinase [Brassica oleracea]
Length = 499
Score = 47.4 bits (111), Expect = 8e-05
Identities = 22/27 (81%), Positives = 25/27 (92%)
Frame = -3
Query: 475 SVVIEHSHDGSGIGAALLAASHSQYLE 395
SV + HS+DGSG+GAALLAASHSQYLE
Sbjct: 468 SVEVIHSNDGSGVGAALLAASHSQYLE 494
>emb|CAC81350.1| hexokinase [Lycopersicon esculentum]
Length = 498
Score = 47.0 bits (110), Expect = 1e-04
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = -3
Query: 475 SVVIEHSHDGSGIGAALLAASHSQYLE 395
S+V HS+DGSGIGAALLAASHS YLE
Sbjct: 468 SIVFVHSNDGSGIGAALLAASHSMYLE 494
>sp|Q9SEK2|HXK1_TOBAC Hexokinase 1 gi|6594674|gb|AAF18585.1|AF118133_1 chloroplast outer
envelope hexokinase 1 [Nicotiana tabacum]
Length = 497
Score = 47.0 bits (110), Expect = 1e-04
Identities = 22/27 (81%), Positives = 25/27 (92%)
Frame = -3
Query: 475 SVVIEHSHDGSGIGAALLAASHSQYLE 395
S+V EHS+DGSGIGAALLAAS+S YLE
Sbjct: 468 SIVFEHSNDGSGIGAALLAASNSMYLE 494
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 419,014,227
Number of Sequences: 1393205
Number of extensions: 9101786
Number of successful extensions: 21239
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 20659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21222
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 13106568690
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
