Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019742A_C01 KMC019742A_c01
(530 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_188637.1| arginine methyltransferase, putative; protein i... 204 5e-52
dbj|BAB01859.1| protein arginine N-methyltransferase-like protei... 204 5e-52
pir||T49355 related to protein arginine N-methyltransferase 3 [i... 124 5e-28
gb|AAL36326.1| putative arginine methyltransferase pam1 [Arabido... 124 7e-28
ref|NP_194680.1| arginine methyltransferase (pam1); protein id: ... 124 7e-28
>ref|NP_188637.1| arginine methyltransferase, putative; protein id: At3g20020.1
[Arabidopsis thaliana]
Length = 409
Score = 204 bits (519), Expect = 5e-52
Identities = 108/167 (64%), Positives = 127/167 (75%), Gaps = 10/167 (5%)
Frame = +1
Query: 58 QQQQQPPAMVYGQNHRYRERVRRGSRRSRASSSSPLPVRVSD----------TDQPRPPC 207
+ +Q P +G R ++R G+R R ++ L RVSD ++ PPC
Sbjct: 22 EDKQGPSLSSFG---RAKKRSHAGARDPRGGLANVL--RVSDQLGEHKSLETSESSPPPC 76
Query: 208 TDYDMAYFHSYAHLGIHQEMIKDRVRTETYREAIMRHQSFIAGKVVVDVGCGTGILSIFC 387
TD+D+AYFHSYAH+GIH+EMIKDR RTETYREAIM+HQS I GKVVVDVGCGTGILSIFC
Sbjct: 77 TDFDVAYFHSYAHVGIHEEMIKDRARTETYREAIMQHQSLIEGKVVVDVGCGTGILSIFC 136
Query: 388 AQAGAKRVYAVDASDIALQANEVVKANNLSDVIVVLHGRVEDVEINE 528
AQAGAKRVYAVDASDIA+QA EVVKAN LSD ++VLHGRVEDVEI+E
Sbjct: 137 AQAGAKRVYAVDASDIAVQAKEVVKANGLSDKVIVLHGRVEDVEIDE 183
>dbj|BAB01859.1| protein arginine N-methyltransferase-like protein [Arabidopsis
thaliana]
Length = 399
Score = 204 bits (519), Expect = 5e-52
Identities = 108/167 (64%), Positives = 127/167 (75%), Gaps = 10/167 (5%)
Frame = +1
Query: 58 QQQQQPPAMVYGQNHRYRERVRRGSRRSRASSSSPLPVRVSD----------TDQPRPPC 207
+ +Q P +G R ++R G+R R ++ L RVSD ++ PPC
Sbjct: 22 EDKQGPSLSSFG---RAKKRSHAGARDPRGGLANVL--RVSDQLGEHKSLETSESSPPPC 76
Query: 208 TDYDMAYFHSYAHLGIHQEMIKDRVRTETYREAIMRHQSFIAGKVVVDVGCGTGILSIFC 387
TD+D+AYFHSYAH+GIH+EMIKDR RTETYREAIM+HQS I GKVVVDVGCGTGILSIFC
Sbjct: 77 TDFDVAYFHSYAHVGIHEEMIKDRARTETYREAIMQHQSLIEGKVVVDVGCGTGILSIFC 136
Query: 388 AQAGAKRVYAVDASDIALQANEVVKANNLSDVIVVLHGRVEDVEINE 528
AQAGAKRVYAVDASDIA+QA EVVKAN LSD ++VLHGRVEDVEI+E
Sbjct: 137 AQAGAKRVYAVDASDIAVQAKEVVKANGLSDKVIVLHGRVEDVEIDE 183
>pir||T49355 related to protein arginine N-methyltransferase 3 [imported] -
Neurospora crassa gi|7800799|emb|CAB91258.1| related to
protein arginine N-methyltransferase 3 [Neurospora
crassa] gi|28917955|gb|EAA27639.1| hypothetical protein
( related to protein arginine N-methyltransferase 3
[imported] - Neurospora crassa )
Length = 521
Score = 124 bits (312), Expect = 5e-28
Identities = 66/124 (53%), Positives = 86/124 (69%)
Frame = +1
Query: 145 ASSSSPLPVRVSDTDQPRPPCTDYDMAYFHSYAHLGIHQEMIKDRVRTETYREAIMRHQS 324
A+ S P P + + +DY YF SYAH IH+ M+KD VRTE YR+ I +++
Sbjct: 155 AAPSGPAP----EGPAAKEGASDY---YFESYAHNDIHETMLKDTVRTEAYRDFIYQNKD 207
Query: 325 FIAGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASDIALQANEVVKANNLSDVIVVLHGR 504
AGKVV+D+GCGTGILS+FCA+AGAK+V AVD S+I +A E + AN LSDVIV L GR
Sbjct: 208 LFAGKVVLDIGCGTGILSMFCAKAGAKQVIAVDRSEIIDKARENIYANGLSDVIVTLKGR 267
Query: 505 VEDV 516
+E+V
Sbjct: 268 IEEV 271
>gb|AAL36326.1| putative arginine methyltransferase pam1 [Arabidopsis thaliana]
Length = 390
Score = 124 bits (311), Expect = 7e-28
Identities = 61/115 (53%), Positives = 83/115 (72%)
Frame = +1
Query: 178 SDTDQPRPPCTDYDMAYFHSYAHLGIHQEMIKDRVRTETYREAIMRHQSFIAGKVVVDVG 357
+DT + T D YF SY+H GIH+EM+KD VRT+TY+ I +++ I K+V+DVG
Sbjct: 57 ADTAEVTDDTTSADY-YFDSYSHFGIHEEMLKDVVRTKTYQNVIYQNKFLIKDKIVLDVG 115
Query: 358 CGTGILSIFCAQAGAKRVYAVDASDIALQANEVVKANNLSDVIVVLHGRVEDVEI 522
GTGILS+FCA+AGA VYAV+ S +A A E+VKAN SDVI VL G++E++E+
Sbjct: 116 AGTGILSLFCAKAGAAHVYAVECSQMADMAKEIVKANGFSDVITVLKGKIEEIEL 170
>ref|NP_194680.1| arginine methyltransferase (pam1); protein id: At4g29510.1,
supported by cDNA: 38601., supported by cDNA:
gi_17381027 [Arabidopsis thaliana]
gi|7488282|pir||T09914 protein-arginine
N-methyltransferase (EC 2.1.1.23) - Arabidopsis thaliana
gi|5123545|emb|CAB45311.1| arginine methyltransferase
(pam1) [Arabidopsis thaliana] gi|7269850|emb|CAB79709.1|
arginine methyltransferase (pam1) [Arabidopsis thaliana]
gi|21593404|gb|AAM65371.1| arginine methyltransferase
pam1 [Arabidopsis thaliana] gi|23297369|gb|AAN12952.1|
arginine methyltransferase pam1 [Arabidopsis thaliana]
Length = 390
Score = 124 bits (311), Expect = 7e-28
Identities = 61/115 (53%), Positives = 83/115 (72%)
Frame = +1
Query: 178 SDTDQPRPPCTDYDMAYFHSYAHLGIHQEMIKDRVRTETYREAIMRHQSFIAGKVVVDVG 357
+DT + T D YF SY+H GIH+EM+KD VRT+TY+ I +++ I K+V+DVG
Sbjct: 57 ADTAEVTDDTTSADY-YFDSYSHFGIHEEMLKDVVRTKTYQNVIYQNKFLIKDKIVLDVG 115
Query: 358 CGTGILSIFCAQAGAKRVYAVDASDIALQANEVVKANNLSDVIVVLHGRVEDVEI 522
GTGILS+FCA+AGA VYAV+ S +A A E+VKAN SDVI VL G++E++E+
Sbjct: 116 AGTGILSLFCAKAGAAHVYAVECSQMADMAKEIVKANGFSDVITVLKGKIEEIEL 170
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 489,793,907
Number of Sequences: 1393205
Number of extensions: 11675917
Number of successful extensions: 51426
Number of sequences better than 10.0: 617
Number of HSP's better than 10.0 without gapping: 46487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50851
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17596710992
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
