Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019739A_C01 KMC019739A_c01
(530 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_182001.1| unknown protein; protein id: At2g44730.1 [Arabi... 91 9e-18
ref|NP_193439.1| hypothetical protein; protein id: At4g17060.1 [... 75 5e-13
dbj|BAC42864.1| unknown protein [Arabidopsis thaliana] 75 5e-13
gb|AAG60191.1|AC084763_11 hypothetical protein [Oryza sativa] 62 3e-09
dbj|BAC03887.1| unnamed protein product [Homo sapiens] 50 2e-05
>ref|NP_182001.1| unknown protein; protein id: At2g44730.1 [Arabidopsis thaliana]
gi|7485544|pir||T01600 hypothetical protein At2g44730
[imported] - Arabidopsis thaliana
gi|3341693|gb|AAC27475.1| unknown protein [Arabidopsis
thaliana]
Length = 372
Score = 90.9 bits (224), Expect = 9e-18
Identities = 47/79 (59%), Positives = 61/79 (76%), Gaps = 6/79 (7%)
Frame = -1
Query: 515 ERDPVGEVVSAIKVLGDGFVRMEQMKMEMAKEIEMMRIETEMKRTEMILESQQRIVESFA 336
+ DP+ E+ SAIK+LGD VR EQ +MEM +EIE MR++TEMKRT+MILESQQRIVE+FA
Sbjct: 294 DNDPMVEIASAIKLLGDTLVRTEQTRMEMTREIEAMRMDTEMKRTKMILESQQRIVEAFA 353
Query: 335 RAIS------ENNKKKNMR 297
+++S E +KKK R
Sbjct: 354 KSLSDYTTTEEQDKKKKAR 372
>ref|NP_193439.1| hypothetical protein; protein id: At4g17060.1 [Arabidopsis
thaliana] gi|7485030|pir||A71439 hypothetical protein -
Arabidopsis thaliana gi|2245063|emb|CAB10486.1|
hypothetical protein [Arabidopsis thaliana]
gi|7268457|emb|CAB80977.1| hypothetical protein
[Arabidopsis thaliana]
Length = 310
Score = 75.1 bits (183), Expect = 5e-13
Identities = 38/73 (52%), Positives = 54/73 (73%)
Frame = -1
Query: 515 ERDPVGEVVSAIKVLGDGFVRMEQMKMEMAKEIEMMRIETEMKRTEMILESQQRIVESFA 336
E DP+ EVVS++K+L + FVR+E KMEM +E+E R+E E+K +M+LESQQ+I+ +FA
Sbjct: 235 ESDPIDEVVSSVKMLTEMFVRVENSKMEMMREMEKSRMEMELKHCQMMLESQQQIIGAFA 294
Query: 335 RAISENNKKKNMR 297
A+SE K N R
Sbjct: 295 EALSE-KKSTNAR 306
>dbj|BAC42864.1| unknown protein [Arabidopsis thaliana]
Length = 434
Score = 75.1 bits (183), Expect = 5e-13
Identities = 38/73 (52%), Positives = 54/73 (73%)
Frame = -1
Query: 515 ERDPVGEVVSAIKVLGDGFVRMEQMKMEMAKEIEMMRIETEMKRTEMILESQQRIVESFA 336
E DP+ EVVS++K+L + FVR+E KMEM +E+E R+E E+K +M+LESQQ+I+ +FA
Sbjct: 359 ESDPIDEVVSSVKMLTEMFVRVENSKMEMIREMEKSRMEMELKHCQMMLESQQQIIGAFA 418
Query: 335 RAISENNKKKNMR 297
A+SE K N R
Sbjct: 419 EALSE-KKSTNAR 430
>gb|AAG60191.1|AC084763_11 hypothetical protein [Oryza sativa]
Length = 336
Score = 62.4 bits (150), Expect = 3e-09
Identities = 28/64 (43%), Positives = 48/64 (74%)
Frame = -1
Query: 530 SGKKRERDPVGEVVSAIKVLGDGFVRMEQMKMEMAKEIEMMRIETEMKRTEMILESQQRI 351
S + E + + EV SA++ +GD F+RME+ ++E++ +IE R+E+EMKRT+ +L++QQ
Sbjct: 242 SEEDAEAEAMAEVASALRAVGDKFLRMEERRLEISLQIEKERMESEMKRTQTLLDAQQLF 301
Query: 350 VESF 339
VE+F
Sbjct: 302 VEAF 305
>dbj|BAC03887.1| unnamed protein product [Homo sapiens]
Length = 258
Score = 50.1 bits (118), Expect = 2e-05
Identities = 35/80 (43%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Frame = +2
Query: 299 SCSSSCCSPKSPSQTTPQFAVETPESSQCA-SSLSQSASFQSPSPSPSSSAP---SAQTH 466
S SSS S SPS ++P + +P SS + SS S S S S SPSP SS+P S+ T
Sbjct: 157 SSSSSSSSSSSPSSSSPSSSGSSPSSSNSSPSSSSSSPSSSSSSPSPRSSSPSSSSSSTS 216
Query: 467 HPKP*SQTPLPPPDLSPSSS 526
P S + P SPSSS
Sbjct: 217 SPSTSSPSSSSPSSSSPSSS 236
Score = 46.2 bits (108), Expect = 2e-04
Identities = 35/88 (39%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Frame = +2
Query: 299 SCSSSCCSPKSPSQTTPQFAVETPESSQCASSLSQSASFQSP-----SPSPSSSAPSAQT 463
S SSS SP S S + + + SS SS S S+S SP SPS SSS+PS+ +
Sbjct: 139 SSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPSSSGSSPSSSNSSPSSSSSSPSSSS 198
Query: 464 HHPKP*SQTP-------LPPPDLSPSSS 526
P P S +P P SPSSS
Sbjct: 199 SSPSPRSSSPSSSSSSTSSPSTSSPSSS 226
Score = 45.1 bits (105), Expect = 5e-04
Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Frame = +2
Query: 299 SCSSSCCSPKSPSQTTPQFAVETPESSQCASSLSQSA-SFQSPS-----PSPSSSAPSAQ 460
S SSS S S S ++P + +P SS +SS S S+ S SPS PS S+S+PS+
Sbjct: 131 SSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPSSSGSSPSSSNSSPSSS 190
Query: 461 THHPKP*SQTPLPPPDLSPSSS 526
+ P S +P P SPSSS
Sbjct: 191 SSSPSSSSSSP-SPRSSSPSSS 211
Score = 43.5 bits (101), Expect = 0.002
Identities = 33/86 (38%), Positives = 43/86 (49%), Gaps = 10/86 (11%)
Frame = +2
Query: 299 SCSSSCCSPKSPSQTTPQFAVETPESSQCASSLSQSASFQSPSPS----------PSSSA 448
S SSS S S S ++P + +P SS +SS S S+S SPS S PSSS+
Sbjct: 113 SSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSS 172
Query: 449 PSAQTHHPKP*SQTPLPPPDLSPSSS 526
PS+ P + +P SPSSS
Sbjct: 173 PSSSGSSPSSSNSSP-SSSSSSPSSS 197
Score = 42.0 bits (97), Expect = 0.005
Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Frame = +2
Query: 299 SCSSSCCSPKSPSQTTPQFAVETPESSQCASSLSQSASFQSPS---------PSPSSSAP 451
S SSS S S S ++ + +P SS +SS S S+S SPS PS SSS+P
Sbjct: 95 SSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSP 154
Query: 452 SAQTHHPKP*SQTPLPPPDLSPSSSP 529
S+ + S +P S SSP
Sbjct: 155 SSSSSSSSSSSSSPSSSSPSSSGSSP 180
Score = 41.2 bits (95), Expect = 0.008
Identities = 31/77 (40%), Positives = 40/77 (51%)
Frame = +2
Query: 299 SCSSSCCSPKSPSQTTPQFAVETPESSQCASSLSQSASFQSPSPSPSSSAPSAQTHHPKP 478
S SS S SPS ++ + +P SS SS S S+S S S S SSS+PS+ + P
Sbjct: 81 SSPSSSSSTSSPSSSSSSSSSSSPSSSN--SSSSSSSSSPSSSSSSSSSSPSSSSSSPSS 138
Query: 479 *SQTPLPPPDLSPSSSP 529
S + P S SSSP
Sbjct: 139 SSSSSSSSPS-SSSSSP 154
Score = 40.4 bits (93), Expect = 0.013
Identities = 30/80 (37%), Positives = 40/80 (49%), Gaps = 4/80 (5%)
Frame = +2
Query: 299 SCSSSCCSPKSPSQTTPQFAVETPESSQCASSLSQSASFQSPSPSPSSS----APSAQTH 466
S SSS SP S S ++ + + SS +SS S S+S S S SPSSS + S+ +
Sbjct: 84 SSSSSTSSPSSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSS 143
Query: 467 HPKP*SQTPLPPPDLSPSSS 526
P S + P S SSS
Sbjct: 144 SSSPSSSSSSPSSSSSSSSS 163
Score = 38.5 bits (88), Expect = 0.050
Identities = 29/76 (38%), Positives = 38/76 (49%)
Frame = +2
Query: 299 SCSSSCCSPKSPSQTTPQFAVETPESSQCASSLSQSASFQSPSPSPSSSAPSAQTHHPKP 478
S SSS SP S ++ +P SS +SS S S+S SPS S SSS+ S+ +
Sbjct: 57 SSSSSSSSPSSSHSSS------SPSSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSNSS 110
Query: 479 *SQTPLPPPDLSPSSS 526
S + P S SSS
Sbjct: 111 SSSSSSSPSSSSSSSS 126
Score = 36.2 bits (82), Expect = 0.25
Identities = 28/77 (36%), Positives = 36/77 (46%)
Frame = +2
Query: 299 SCSSSCCSPKSPSQTTPQFAVETPESSQCASSLSQSASFQSPSPSPSSSAPSAQTHHPKP 478
S SS S SPS + + + SS SS S ++S S S S SSS+PS+
Sbjct: 54 SIPSSSSSSSSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSNSSSSS 113
Query: 479 *SQTPLPPPDLSPSSSP 529
S +P S SSSP
Sbjct: 114 SSSSP-SSSSSSSSSSP 129
Score = 35.8 bits (81), Expect = 0.32
Identities = 29/76 (38%), Positives = 36/76 (47%)
Frame = +2
Query: 299 SCSSSCCSPKSPSQTTPQFAVETPESSQCASSLSQSASFQSPSPSPSSSAPSAQTHHPKP 478
S SSS S S S + + +P SS SS S S+S S S SPSSS S+ + P
Sbjct: 60 SSSSSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSS-SSSSSSPSSSNSSSSSSSSSP 118
Query: 479 *SQTPLPPPDLSPSSS 526
S + S SSS
Sbjct: 119 SSSSSSSSSSPSSSSS 134
Score = 35.4 bits (80), Expect = 0.42
Identities = 28/77 (36%), Positives = 37/77 (47%), Gaps = 1/77 (1%)
Frame = +2
Query: 299 SCSSSCCSPKSPSQTTPQFAVETPESSQCASSLSQSASFQSPSPSPSSSAPSAQTHHPKP 478
S SS S SPS + + + S+ SS S S+S SPS S SSS+ S+ +
Sbjct: 63 SSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSNSSSSSSSSSPSSSS 122
Query: 479 *SQTPLP-PPDLSPSSS 526
S + P SPSSS
Sbjct: 123 SSSSSSPSSSSSSPSSS 139
Score = 35.4 bits (80), Expect = 0.42
Identities = 26/74 (35%), Positives = 34/74 (45%)
Frame = +2
Query: 305 SSSCCSPKSPSQTTPQFAVETPESSQCASSLSQSASFQSPSPSPSSSAPSAQTHHPKP*S 484
SSS S S S + + +P SS +SS S +S S S S SSS S+ + S
Sbjct: 71 SSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPS 130
Query: 485 QTPLPPPDLSPSSS 526
+ P S SSS
Sbjct: 131 SSSSSPSSSSSSSS 144
Score = 34.7 bits (78), Expect = 0.72
Identities = 25/55 (45%), Positives = 32/55 (57%), Gaps = 2/55 (3%)
Frame = +2
Query: 299 SCSSSCCSPKSPSQT-TPQFAVETPESSQCASSLSQSASFQSPSPS-PSSSAPSA 457
S SSS SP S S + +P+ + + SS +S + S S SPS S PSSS PSA
Sbjct: 186 SPSSSSSSPSSSSSSPSPRSSSPSSSSSSTSSPSTSSPSSSSPSSSSPSSSCPSA 240
Score = 34.3 bits (77), Expect = 0.94
Identities = 30/79 (37%), Positives = 38/79 (47%), Gaps = 5/79 (6%)
Frame = +2
Query: 305 SSSCCSPKSPSQTTPQFAVETPESSQCASSLSQSASFQSPSPS-----PSSSAPSAQTHH 469
SSS S PS ++ +P SS +SS S S S SPS S PSSS+ S+ +
Sbjct: 47 SSSILSSSIPSSSSSS---SSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSS 103
Query: 470 PKP*SQTPLPPPDLSPSSS 526
P S + SPSSS
Sbjct: 104 PSS-SNSSSSSSSSSPSSS 121
Score = 33.1 bits (74), Expect = 2.1
Identities = 26/76 (34%), Positives = 32/76 (41%)
Frame = +2
Query: 299 SCSSSCCSPKSPSQTTPQFAVETPESSQCASSLSQSASFQSPSPSPSSSAPSAQTHHPKP 478
S S S S S + P + + S SS S S+S S SPS SSS S +
Sbjct: 40 SSSRSILSSSILSSSIPSSSSSSSSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSS 99
Query: 479 *SQTPLPPPDLSPSSS 526
S +P S SSS
Sbjct: 100 SSSSPSSSNSSSSSSS 115
Score = 32.0 bits (71), Expect = 4.7
Identities = 23/67 (34%), Positives = 33/67 (48%)
Frame = +2
Query: 299 SCSSSCCSPKSPSQTTPQFAVETPESSQCASSLSQSASFQSPSPSPSSSAPSAQTHHPKP 478
S SSS SP+S S ++ + +P +S +SS S S SPS S S+A + P+
Sbjct: 195 SSSSSSPSPRSSSPSSSSSSTSSPSTSSPSSS---SPSSSSPSSSCPSAALGRRPQSPQS 251
Query: 479 *SQTPLP 499
P P
Sbjct: 252 SHCAPFP 258
Score = 32.0 bits (71), Expect = 4.7
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Frame = +2
Query: 299 SCSSSCCSPKSP-SQTTPQFAVETPESSQCASSLSQSASFQSPSPSPSSS---APSAQTH 466
S S S SP S S ++P + T S +SS S S+ S S S SSS + S+ +
Sbjct: 66 SSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSS 125
Query: 467 HPKP*SQTPLPPPDLSPSSS 526
P S + P S SSS
Sbjct: 126 SSSPSSSSSSPSSSSSSSSS 145
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 411,982,069
Number of Sequences: 1393205
Number of extensions: 8737771
Number of successful extensions: 83894
Number of sequences better than 10.0: 1216
Number of HSP's better than 10.0 without gapping: 49485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72439
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17596710992
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
