Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019702A_C01 KMC019702A_c01
(542 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P36907|CHIX_PEA ENDOCHITINASE PRECURSOR gi|2118033|pir||S5994... 220 8e-57
gb|AAF17593.1|AF202731_1 chitinase class I [Glycine max] gi|1269... 216 1e-55
gb|AAM12890.1|AF494397_1 class II chitinase [Malus x domestica] 211 4e-54
dbj|BAB82472.1| chitinase 2 [Triticum aestivum] 206 1e-52
gb|AAL16893.1|AF420225_1 class II chitinase [Fragaria x ananassa] 205 3e-52
>sp|P36907|CHIX_PEA ENDOCHITINASE PRECURSOR gi|2118033|pir||S59947 chitinase (EC
3.2.1.14) A1 precursor - garden pea
gi|20687|emb|CAA45359.1| chitinase [Pisum sativum]
Length = 320
Score = 220 bits (561), Expect = 8e-57
Identities = 99/126 (78%), Positives = 115/126 (90%)
Frame = -3
Query: 540 QLTHNYNYGLAGKAIQQDLISDPDLVSRDPIVSFKTAIWFWMTRQANKPSCHDVITGKWT 361
QLTHNYNYGLAG+AI++DLI++PDL+S +P VSFKTAIWFWMT QANKPS HDVITG+WT
Sbjct: 195 QLTHNYNYGLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTPQANKPSSHDVITGRWT 254
Query: 360 PTSADSSAGRVPGYGVITNIINGGVECENRQNDKVQDRIGFYKRYCQIFRVSPGDNLDCN 181
P++ADSSAGRVPGYGVITNIINGG+EC + Q+++V DR+GFYKRYCQIF V PG NLDCN
Sbjct: 255 PSAADSSAGRVPGYGVITNIINGGIECGHGQDNRVDDRVGFYKRYCQIFGVDPGGNLDCN 314
Query: 180 NQRPFA 163
NQR FA
Sbjct: 315 NQRSFA 320
>gb|AAF17593.1|AF202731_1 chitinase class I [Glycine max]
gi|12698917|gb|AAK01734.1|AF335589_1 chitinase class I
[Glycine max]
Length = 320
Score = 216 bits (551), Expect = 1e-55
Identities = 97/126 (76%), Positives = 112/126 (87%)
Frame = -3
Query: 540 QLTHNYNYGLAGKAIQQDLISDPDLVSRDPIVSFKTAIWFWMTRQANKPSCHDVITGKWT 361
QLTHNYNYG AGKA+ DLI++PDLV+ D VSFKTA+WFWMT Q NKPS HDVITG+WT
Sbjct: 195 QLTHNYNYGQAGKALGLDLINNPDLVATDATVSFKTALWFWMTAQGNKPSSHDVITGRWT 254
Query: 360 PTSADSSAGRVPGYGVITNIINGGVECENRQNDKVQDRIGFYKRYCQIFRVSPGDNLDCN 181
P+SADSSAGR PGYGVITNIINGG+EC + Q+++VQDRIGFY+RYCQ+ +SPGDNLDCN
Sbjct: 255 PSSADSSAGRAPGYGVITNIINGGLECGHGQDNRVQDRIGFYRRYCQMMGISPGDNLDCN 314
Query: 180 NQRPFA 163
NQRPFA
Sbjct: 315 NQRPFA 320
>gb|AAM12890.1|AF494397_1 class II chitinase [Malus x domestica]
Length = 181
Score = 211 bits (538), Expect = 4e-54
Identities = 95/126 (75%), Positives = 112/126 (88%)
Frame = -3
Query: 540 QLTHNYNYGLAGKAIQQDLISDPDLVSRDPIVSFKTAIWFWMTRQANKPSCHDVITGKWT 361
QLTHNYNYG AG+AI +DLI++PDLV+ DP+VSF+TAIWFWMT Q NKPS HDVITG+W+
Sbjct: 56 QLTHNYNYGQAGQAIGKDLINNPDLVATDPLVSFRTAIWFWMTPQGNKPSSHDVITGRWS 115
Query: 360 PTSADSSAGRVPGYGVITNIINGGVECENRQNDKVQDRIGFYKRYCQIFRVSPGDNLDCN 181
P+SAD+SAGRVPGYGVITNIINGG+EC Q+ +V RIGFY+RYC+I +VSPGDNLDC
Sbjct: 116 PSSADTSAGRVPGYGVITNIINGGLECGKGQDARVASRIGFYRRYCEILQVSPGDNLDCY 175
Query: 180 NQRPFA 163
NQRPFA
Sbjct: 176 NQRPFA 181
>dbj|BAB82472.1| chitinase 2 [Triticum aestivum]
Length = 323
Score = 206 bits (524), Expect = 1e-52
Identities = 93/125 (74%), Positives = 106/125 (84%)
Frame = -3
Query: 540 QLTHNYNYGLAGKAIQQDLISDPDLVSRDPIVSFKTAIWFWMTRQANKPSCHDVITGKWT 361
QLTHNYNYG AG+AI DL+++PDLV+ DP V+FKTAIWFWMT Q+NKPSCHDVITG WT
Sbjct: 192 QLTHNYNYGPAGRAIGVDLLNNPDLVATDPTVAFKTAIWFWMTTQSNKPSCHDVITGLWT 251
Query: 360 PTSADSSAGRVPGYGVITNIINGGVECENRQNDKVQDRIGFYKRYCQIFRVSPGDNLDCN 181
PT+ DS+AGRVPGYGVITN+INGG+EC QNDKV DRIGFYKRYC IF + G+NLDC
Sbjct: 252 PTARDSAAGRVPGYGVITNVINGGIECGMGQNDKVADRIGFYKRYCDIFGIGYGNNLDCY 311
Query: 180 NQRPF 166
NQ F
Sbjct: 312 NQLSF 316
>gb|AAL16893.1|AF420225_1 class II chitinase [Fragaria x ananassa]
Length = 260
Score = 205 bits (521), Expect = 3e-52
Identities = 93/125 (74%), Positives = 106/125 (84%)
Frame = -3
Query: 540 QLTHNYNYGLAGKAIQQDLISDPDLVSRDPIVSFKTAIWFWMTRQANKPSCHDVITGKWT 361
QLTHNYNYG AGKAI DLI++PDLV+ DP++SFKTAIWFWMT Q NKPS HDVITG+W
Sbjct: 136 QLTHNYNYGPAGKAIGVDLINNPDLVATDPVISFKTAIWFWMTPQGNKPSSHDVITGRWN 195
Query: 360 PTSADSSAGRVPGYGVITNIINGGVECENRQNDKVQDRIGFYKRYCQIFRVSPGDNLDCN 181
P++AD SAGRVPGYGVITNIINGG+EC Q+++V DRIGFYKRYC + V GDNLDC
Sbjct: 196 PSAADRSAGRVPGYGVITNIINGGLECGRGQDNRVADRIGFYKRYCGMLGVGTGDNLDCY 255
Query: 180 NQRPF 166
NQRPF
Sbjct: 256 NQRPF 260
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 458,216,359
Number of Sequences: 1393205
Number of extensions: 9852010
Number of successful extensions: 25527
Number of sequences better than 10.0: 345
Number of HSP's better than 10.0 without gapping: 24962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25376
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18750593680
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
