Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019654A_C01 KMC019654A_c01
(567 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC42590.1| putative protein kinase [Arabidopsis thaliana] 169 2e-41
ref|NP_195722.1| protein kinase -like protein; protein id: At5g0... 169 2e-41
ref|NP_176353.1| serine/threonine protein kinase, putative; prot... 107 1e-22
pir||A84483 probable protein kinase [imported] - Arabidopsis tha... 106 2e-22
ref|NP_178731.2| putative protein kinase; protein id: At2g07180.... 106 2e-22
>dbj|BAC42590.1| putative protein kinase [Arabidopsis thaliana]
Length = 410
Score = 169 bits (428), Expect = 2e-41
Identities = 99/159 (62%), Positives = 109/159 (68%), Gaps = 1/159 (0%)
Frame = +2
Query: 92 MGNCGTREESAVVS-NAQVQQLNHAPSLGACSSRTITATGGSGLSEKKYTLRQTLSESAS 268
MGNCGTR+E+AV + AQ QQL +KK+ S S S
Sbjct: 1 MGNCGTRDEAAVFTPQAQAQQL-----------------------QKKH------SRSVS 31
Query: 269 DLSETCSTPRANSSCSNNTLLYTHVIAFTLYELETITKSFRGDYILGEGGFGTVYKGYID 448
DLS+ STPR S + Y VI FTL+ELETITKSFR DYILGEGGFGTVYKGYID
Sbjct: 32 DLSDP-STPRFRDD-SRTPISYAQVIPFTLFELETITKSFRPDYILGEGGFGTVYKGYID 89
Query: 449 ENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLR 565
+N+RVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLR
Sbjct: 90 DNLRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLR 128
>ref|NP_195722.1| protein kinase -like protein; protein id: At5g01020.1 [Arabidopsis
thaliana] gi|9542860|emb|CAB99493.1| protein kinase-like
protein [Arabidopsis thaliana]
Length = 410
Score = 169 bits (428), Expect = 2e-41
Identities = 99/159 (62%), Positives = 109/159 (68%), Gaps = 1/159 (0%)
Frame = +2
Query: 92 MGNCGTREESAVVS-NAQVQQLNHAPSLGACSSRTITATGGSGLSEKKYTLRQTLSESAS 268
MGNCGTR+E+AV + AQ QQL +KK+ S S S
Sbjct: 1 MGNCGTRDEAAVFTPQAQAQQL-----------------------QKKH------SRSVS 31
Query: 269 DLSETCSTPRANSSCSNNTLLYTHVIAFTLYELETITKSFRGDYILGEGGFGTVYKGYID 448
DLS+ STPR S + Y VI FTL+ELETITKSFR DYILGEGGFGTVYKGYID
Sbjct: 32 DLSDP-STPRFRDD-SRTPISYAQVIPFTLFELETITKSFRPDYILGEGGFGTVYKGYID 89
Query: 449 ENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLR 565
+N+RVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLR
Sbjct: 90 DNLRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLR 128
>ref|NP_176353.1| serine/threonine protein kinase, putative; protein id: At1g61590.1,
supported by cDNA: gi_17381260, supported by cDNA:
gi_20453380 [Arabidopsis thaliana]
gi|25287627|pir||C96641 hypothetical protein T25B24.6
[imported] - Arabidopsis thaliana
gi|4585873|gb|AAD25546.1|AC005850_3 Putative protein
kinase [Arabidopsis thaliana] gi|17381261|gb|AAL36049.1|
At1g61590/T25B24_6 [Arabidopsis thaliana]
gi|20453381|gb|AAM19929.1| At1g61590/T25B24_6
[Arabidopsis thaliana]
Length = 424
Score = 107 bits (266), Expect = 1e-22
Identities = 56/102 (54%), Positives = 75/102 (72%)
Frame = +2
Query: 260 SASDLSETCSTPRANSSCSNNTLLYTHVIAFTLYELETITKSFRGDYILGEGGFGTVYKG 439
S +DLS + S+ R N + L ++ F + EL+ IT+SF G+Y+LGEGGFG VYKG
Sbjct: 60 SFADLSRS-SSARINEDLAQT--LGADLVDFQMCELKMITQSFSGNYLLGEGGFGKVYKG 116
Query: 440 YIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLR 565
Y+D+ +R LK+ PVAVK+L+ EGLQGHREWL+EV FLGQL+
Sbjct: 117 YVDDYLRQSLKAQPVAVKLLDIEGLQGHREWLSEVIFLGQLK 158
>pir||A84483 probable protein kinase [imported] - Arabidopsis thaliana
gi|3805765|gb|AAC69121.1| putative protein kinase
[Arabidopsis thaliana]
Length = 423
Score = 106 bits (265), Expect = 2e-22
Identities = 52/77 (67%), Positives = 58/77 (74%)
Frame = +2
Query: 332 YTHVIAFTLYELETITKSFRGDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEG 511
Y +V FT E++ TK FR DYILGEGGFG VYKG IDE+VRVG KS VA+K LN EG
Sbjct: 53 YENVDIFTYEEMKIATKQFRPDYILGEGGFGVVYKGVIDESVRVGFKSTKVAIKELNPEG 112
Query: 512 LQGHREWLTEVNFLGQL 562
QG REWL EVN+LGQL
Sbjct: 113 FQGDREWLAEVNYLGQL 129
>ref|NP_178731.2| putative protein kinase; protein id: At2g07180.1, supported by
cDNA: gi_19423981 [Arabidopsis thaliana]
gi|23297644|gb|AAN12999.1| putative protein kinase
[Arabidopsis thaliana]
Length = 442
Score = 106 bits (265), Expect = 2e-22
Identities = 52/77 (67%), Positives = 58/77 (74%)
Frame = +2
Query: 332 YTHVIAFTLYELETITKSFRGDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEG 511
Y +V FT E++ TK FR DYILGEGGFG VYKG IDE+VRVG KS VA+K LN EG
Sbjct: 72 YENVDIFTYEEMKIATKQFRPDYILGEGGFGVVYKGVIDESVRVGFKSTKVAIKELNPEG 131
Query: 512 LQGHREWLTEVNFLGQL 562
QG REWL EVN+LGQL
Sbjct: 132 FQGDREWLAEVNYLGQL 148
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 533,624,591
Number of Sequences: 1393205
Number of extensions: 13076872
Number of successful extensions: 155692
Number of sequences better than 10.0: 1778
Number of HSP's better than 10.0 without gapping: 80234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 129770
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20669577624
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
