Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019652A_C01 KMC019652A_c01
(584 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_195981.1| putative protein; protein id: At5g03610.1, supp... 115 5e-25
gb|AAF04430.1|AC010927_23 unknown protein [Arabidopsis thaliana] 100 2e-20
gb|AAO41990.1| putative lipase acylhydrolase [Arabidopsis thaliana] 100 2e-20
ref|NP_187604.1| putative lipase acylhydrolase; protein id: At3g... 100 2e-20
ref|NP_195979.1| putative protein; protein id: At5g03590.1 [Arab... 81 8e-15
>ref|NP_195981.1| putative protein; protein id: At5g03610.1, supported by cDNA:
13022., supported by cDNA: gi_13430833 [Arabidopsis
thaliana] gi|11357496|pir||T48388 hypothetical protein
F17C15.30 - Arabidopsis thaliana
gi|7340646|emb|CAB82926.1| putative protein [Arabidopsis
thaliana] gi|13430834|gb|AAK26039.1|AF360329_1 unknown
protein [Arabidopsis thaliana]
gi|21537326|gb|AAM61667.1| putative lipase/acylhydrolase
[Arabidopsis thaliana]
Length = 359
Score = 115 bits (287), Expect = 5e-25
Identities = 50/91 (54%), Positives = 68/91 (73%), Gaps = 4/91 (4%)
Frame = -3
Query: 561 NHNNTSSFVVLNIYESFLSVL----NHPTTHNIQSQLKPCCVGVSSEYSCGSVDQNNVKK 394
N S+F++L++Y +FL+V ++P + +S LKPCCVGVS EY+CGSVD+ VKK
Sbjct: 259 NETKQSTFIILDLYNAFLTVFKNKGSNPGSTRFESPLKPCCVGVSREYNCGSVDEKGVKK 318
Query: 393 YQVCDEPKSSFFWDMVHPTEAGWRAVYNKLR 301
Y VCD PK++FFWD +HPTE GWR+VY+ LR
Sbjct: 319 YIVCDNPKTAFFWDGLHPTEEGWRSVYSVLR 349
>gb|AAF04430.1|AC010927_23 unknown protein [Arabidopsis thaliana]
Length = 270
Score = 99.8 bits (247), Expect = 2e-20
Identities = 43/90 (47%), Positives = 61/90 (67%), Gaps = 4/90 (4%)
Frame = -3
Query: 561 NHNNTSSFVVLNIYESFLSVLNH----PTTHNIQSQLKPCCVGVSSEYSCGSVDQNNVKK 394
N S+FVVL+ Y +FL+V + P + LKPCCVGV+S Y C +VD+ KK
Sbjct: 172 NETKPSTFVVLDHYNAFLTVFKNKGPEPGVSRFGNPLKPCCVGVNSSYDCSNVDEKGEKK 231
Query: 393 YQVCDEPKSSFFWDMVHPTEAGWRAVYNKL 304
Y +C++PK++FFWD+ HP+E GWR+VY+ L
Sbjct: 232 YIICEDPKAAFFWDIFHPSEEGWRSVYSVL 261
>gb|AAO41990.1| putative lipase acylhydrolase [Arabidopsis thaliana]
Length = 354
Score = 99.8 bits (247), Expect = 2e-20
Identities = 43/90 (47%), Positives = 61/90 (67%), Gaps = 4/90 (4%)
Frame = -3
Query: 561 NHNNTSSFVVLNIYESFLSVLNH----PTTHNIQSQLKPCCVGVSSEYSCGSVDQNNVKK 394
N S+FVVL+ Y +FL+V + P + LKPCCVGV+S Y C +VD+ KK
Sbjct: 256 NETKQSTFVVLDHYNAFLTVFKNKGPEPGVSRFGNPLKPCCVGVNSSYDCSNVDEKGEKK 315
Query: 393 YQVCDEPKSSFFWDMVHPTEAGWRAVYNKL 304
Y +C++PK++FFWD+ HP+E GWR+VY+ L
Sbjct: 316 YIICEDPKAAFFWDIFHPSEEGWRSVYSVL 345
>ref|NP_187604.1| putative lipase acylhydrolase; protein id: At3g09930.1 [Arabidopsis
thaliana] gi|6681326|gb|AAF23243.1|AC015985_1 putative
lipase/acylhydrolase [Arabidopsis thaliana]
Length = 354
Score = 99.8 bits (247), Expect = 2e-20
Identities = 43/90 (47%), Positives = 61/90 (67%), Gaps = 4/90 (4%)
Frame = -3
Query: 561 NHNNTSSFVVLNIYESFLSVLNH----PTTHNIQSQLKPCCVGVSSEYSCGSVDQNNVKK 394
N S+FVVL+ Y +FL+V + P + LKPCCVGV+S Y C +VD+ KK
Sbjct: 256 NETKPSTFVVLDHYNAFLTVFKNKGPEPGVSRFGNPLKPCCVGVNSSYDCSNVDEKGEKK 315
Query: 393 YQVCDEPKSSFFWDMVHPTEAGWRAVYNKL 304
Y +C++PK++FFWD+ HP+E GWR+VY+ L
Sbjct: 316 YIICEDPKAAFFWDIFHPSEEGWRSVYSVL 345
>ref|NP_195979.1| putative protein; protein id: At5g03590.1 [Arabidopsis thaliana]
gi|11357491|pir||T48386 hypothetical protein F17C15.10 -
Arabidopsis thaliana gi|7340644|emb|CAB82924.1| putative
protein [Arabidopsis thaliana]
Length = 231
Score = 81.3 bits (199), Expect = 8e-15
Identities = 31/79 (39%), Positives = 53/79 (66%)
Frame = -3
Query: 540 FVVLNIYESFLSVLNHPTTHNIQSQLKPCCVGVSSEYSCGSVDQNNVKKYQVCDEPKSSF 361
FV+++++++F+++L +S LKPCC G C +D KKY +C++PKS+F
Sbjct: 147 FVIVDLHKAFMTILEKKGNKRFKSPLKPCCEG-----DCARMDMKGAKKYTLCNDPKSAF 201
Query: 360 FWDMVHPTEAGWRAVYNKL 304
FWD ++PT+ GWR++Y+ L
Sbjct: 202 FWDEINPTQEGWRSIYSLL 220
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 494,851,562
Number of Sequences: 1393205
Number of extensions: 10361201
Number of successful extensions: 32342
Number of sequences better than 10.0: 181
Number of HSP's better than 10.0 without gapping: 30019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32113
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21997688174
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
