Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019573A_C01 KMC019573A_c01
(506 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA67107.1| mitochondrial energy transfer protein [Solanum t... 132 3e-30
sp|P29518|BT1_MAIZE Brittle-1 protein, chloroplast precursor gi|... 125 3e-28
ref|NP_194966.1| mitochondrial carrier protein family; protein i... 124 5e-28
gb|AAM61623.1| mitochondrial carrier protein, putative [Arabidop... 73 2e-12
ref|NP_188659.1| mitochondrial carrier protein family; protein i... 73 2e-12
>emb|CAA67107.1| mitochondrial energy transfer protein [Solanum tuberosum]
Length = 385
Score = 132 bits (331), Expect = 3e-30
Identities = 61/75 (81%), Positives = 70/75 (93%)
Frame = -2
Query: 505 PLEVARKHMQVGAXSGRQVYKNVLHALASILEKEGIQGLYRGLGPSCMKLVPAAGISFMC 326
PLEVARKHMQVGA SGR VYKNV+HAL SILE++GI GLY+GLGPSCMKLVPAAGISFMC
Sbjct: 311 PLEVARKHMQVGAVSGRAVYKNVIHALVSILEQDGIHGLYKGLGPSCMKLVPAAGISFMC 370
Query: 325 YEACKRILVEDDDDD 281
YEACKRIL+E ++++
Sbjct: 371 YEACKRILIEAENEE 385
>sp|P29518|BT1_MAIZE Brittle-1 protein, chloroplast precursor gi|82676|pir||JQ1459 Bt1
protein precursor - maize gi|168426|gb|AAA33438.1|
brittle-1 protein
Length = 436
Score = 125 bits (314), Expect = 3e-28
Identities = 58/77 (75%), Positives = 69/77 (89%)
Frame = -2
Query: 505 PLEVARKHMQVGAXSGRQVYKNVLHALASILEKEGIQGLYRGLGPSCMKLVPAAGISFMC 326
PLEVARK MQVGA GRQVY+NVLHA+ IL+KEG GLYRGLGPSC+KL+PAAGI+FMC
Sbjct: 346 PLEVARKQMQVGAVGGRQVYQNVLHAIYCILKKEGAGGLYRGLGPSCIKLMPAAGIAFMC 405
Query: 325 YEACKRILVEDDDDDEE 275
YEACK+ILV+ +D++EE
Sbjct: 406 YEACKKILVDKEDEEEE 422
Score = 51.6 bits (122), Expect = 5e-06
Identities = 27/67 (40%), Positives = 37/67 (54%)
Frame = -2
Query: 505 PLEVARKHMQVGAXSGRQVYKNVLHALASILEKEGIQGLYRGLGPSCMKLVPAAGISFMC 326
P+E+ + + + + VY NV HA IL EG LYRGL PS + +VP A +F
Sbjct: 249 PMELIKTRVTIE----KDVYDNVAHAFVKILRDEGPSELYRGLTPSLIGVVPYAACNFYA 304
Query: 325 YEACKRI 305
YE KR+
Sbjct: 305 YETLKRL 311
>ref|NP_194966.1| mitochondrial carrier protein family; protein id: At4g32400.1,
supported by cDNA: 12232., supported by cDNA:
gi_13937180, supported by cDNA: gi_18491120 [Arabidopsis
thaliana] gi|7484793|pir||T05350 adenylate translocator
brittle-1 homolog F8B4.100 - Arabidopsis thaliana
gi|4049342|emb|CAA22567.1| adenylate translocator
(brittle-1)-like protein [Arabidopsis thaliana]
gi|7270144|emb|CAB79957.1| adenylate translocator
(brittle-1)-like protein [Arabidopsis thaliana]
gi|13937181|gb|AAK50084.1|AF372944_1 AT4g32400/F8B4_100
[Arabidopsis thaliana] gi|18491121|gb|AAL69529.1|
AT4g32400/F8B4_100 [Arabidopsis thaliana]
gi|21537158|gb|AAM61499.1| adenylate translocator
(brittle-1)-like protein [Arabidopsis thaliana]
Length = 392
Score = 124 bits (312), Expect = 5e-28
Identities = 58/74 (78%), Positives = 67/74 (90%)
Frame = -2
Query: 505 PLEVARKHMQVGAXSGRQVYKNVLHALASILEKEGIQGLYRGLGPSCMKLVPAAGISFMC 326
PLEVARKHMQVGA SGR VYKN+LHAL +ILE EGI G Y+GLGPSC+KLVPAAGISFMC
Sbjct: 318 PLEVARKHMQVGAVSGRVVYKNMLHALVTILEHEGILGWYKGLGPSCLKLVPAAGISFMC 377
Query: 325 YEACKRILVEDDDD 284
YEACK+IL+E++ +
Sbjct: 378 YEACKKILIENNQE 391
Score = 45.4 bits (106), Expect = 4e-04
Identities = 22/66 (33%), Positives = 37/66 (55%)
Frame = -2
Query: 505 PLEVARKHMQVGAXSGRQVYKNVLHALASILEKEGIQGLYRGLGPSCMKLVPAAGISFMC 326
PLE+ + + + R VYK + A I+ +EG LYRGL PS + +VP A ++
Sbjct: 224 PLELVKTRLTIQ----RGVYKGIFDAFLKIIREEGPTELYRGLAPSLIGVVPYAATNYFA 279
Query: 325 YEACKR 308
Y++ ++
Sbjct: 280 YDSLRK 285
>gb|AAM61623.1| mitochondrial carrier protein, putative [Arabidopsis thaliana]
Length = 346
Score = 72.8 bits (177), Expect = 2e-12
Identities = 35/69 (50%), Positives = 52/69 (74%)
Frame = -2
Query: 505 PLEVARKHMQVGAXSGRQVYKNVLHALASILEKEGIQGLYRGLGPSCMKLVPAAGISFMC 326
PLEVARK + VGA G + N+ A+A +++KEG+ GLYRG G SC+K++P++GI+++
Sbjct: 271 PLEVARKRLMVGALKG-ECPPNMAAAIAEVVKKEGVMGLYRGWGASCLKVMPSSGITWVF 329
Query: 325 YEACKRILV 299
YEA K IL+
Sbjct: 330 YEAWKDILL 338
Score = 38.9 bits (89), Expect = 0.034
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = -2
Query: 505 PLEVARKHMQVGAXSGRQVYKNVLHALASILEKEGIQGLYRGLGPSCMKLVPAAGISFMC 326
PLEV + + V ++Y ++ A+ I +GI+G Y GLGP+ + ++P + +
Sbjct: 177 PLEVLKDRLTVSP----EIYPSLSLAIPRIFRADGIRGFYAGLGPTLVGMLPYSTCYYFM 232
Query: 325 YEACK 311
Y+ K
Sbjct: 233 YDKMK 237
Score = 34.7 bits (78), Expect = 0.64
Identities = 19/68 (27%), Positives = 35/68 (50%)
Frame = -2
Query: 505 PLEVARKHMQVGAXSGRQVYKNVLHALASILEKEGIQGLYRGLGPSCMKLVPAAGISFMC 326
PLE R M VG S +++ + +++K+G QGL+ G + ++++P I
Sbjct: 66 PLETIRTRMIVGVGS-----RSIPGSFLEVVQKQGWQGLWAGNEINMIRIIPTQAIELGT 120
Query: 325 YEACKRIL 302
+E KR +
Sbjct: 121 FEWVKRAM 128
>ref|NP_188659.1| mitochondrial carrier protein family; protein id: At3g20240.1,
supported by cDNA: 126140. [Arabidopsis thaliana]
gi|9293980|dbj|BAB01883.1| contains similarity to
membrane carrier/translocators~gene_id:MAL21.26
[Arabidopsis thaliana] gi|29029108|gb|AAO64933.1|
At3g20240 [Arabidopsis thaliana]
Length = 348
Score = 72.8 bits (177), Expect = 2e-12
Identities = 35/69 (50%), Positives = 52/69 (74%)
Frame = -2
Query: 505 PLEVARKHMQVGAXSGRQVYKNVLHALASILEKEGIQGLYRGLGPSCMKLVPAAGISFMC 326
PLEVARK + VGA G + N+ A+A +++KEG+ GLYRG G SC+K++P++GI+++
Sbjct: 273 PLEVARKRLMVGALKG-ECPPNMAAAIAEVVKKEGVMGLYRGWGASCLKVMPSSGITWVF 331
Query: 325 YEACKRILV 299
YEA K IL+
Sbjct: 332 YEAWKDILL 340
Score = 38.9 bits (89), Expect = 0.034
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = -2
Query: 505 PLEVARKHMQVGAXSGRQVYKNVLHALASILEKEGIQGLYRGLGPSCMKLVPAAGISFMC 326
PLEV + + V ++Y ++ A+ I +GI+G Y GLGP+ + ++P + +
Sbjct: 179 PLEVLKDRLTVSP----EIYPSLSLAIPRIFRADGIRGFYAGLGPTLVGMLPYSTCYYFM 234
Query: 325 YEACK 311
Y+ K
Sbjct: 235 YDKMK 239
Score = 34.7 bits (78), Expect = 0.64
Identities = 19/68 (27%), Positives = 35/68 (50%)
Frame = -2
Query: 505 PLEVARKHMQVGAXSGRQVYKNVLHALASILEKEGIQGLYRGLGPSCMKLVPAAGISFMC 326
PLE R M VG S +++ + +++K+G QGL+ G + ++++P I
Sbjct: 68 PLETIRTRMIVGVGS-----RSIPGSFLEVVQKQGWQGLWAGNEINMIRIIPTQAIELGT 122
Query: 325 YEACKRIL 302
+E KR +
Sbjct: 123 FEWVKRAM 130
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 435,044,282
Number of Sequences: 1393205
Number of extensions: 9433384
Number of successful extensions: 30619
Number of sequences better than 10.0: 746
Number of HSP's better than 10.0 without gapping: 26181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30159
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15652649358
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
