Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019548A_C01 KMC019548A_c01
(567 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_565491.1| expressed protein; protein id: At2g20890.1, sup... 226 2e-58
gb|AAM64943.1| unknown [Arabidopsis thaliana] 226 2e-58
gb|AAO72565.1| inositol phosphatase-like protein [Oryza sativa (... 215 3e-55
ref|ZP_00073147.1| hypothetical protein [Trichodesmium erythraeu... 100 1e-20
ref|NP_484690.1| hypothetical protein [Nostoc sp. PCC 7120] gi|2... 100 1e-20
>ref|NP_565491.1| expressed protein; protein id: At2g20890.1, supported by cDNA:
34875., supported by cDNA: gi_17065445, supported by
cDNA: gi_20148534 [Arabidopsis thaliana]
gi|25412000|pir||F84594 hypothetical protein At2g20890
[imported] - Arabidopsis thaliana
gi|4454459|gb|AAD20906.1| expressed protein [Arabidopsis
thaliana] gi|17065446|gb|AAL32877.1| Unknown protein
[Arabidopsis thaliana] gi|20148535|gb|AAM10158.1|
unknown protein [Arabidopsis thaliana]
Length = 300
Score = 226 bits (576), Expect = 2e-58
Identities = 119/176 (67%), Positives = 139/176 (78%)
Frame = +2
Query: 38 SERKATLSSTRFLASNSEVFRIRTDFSYHYGGVRASNSSSKMVIQCMSSETDVPPPVSET 217
S++ + +S+R LAS RI T FS S S+SK +I CMS+ T PPVSET
Sbjct: 17 SDKISNFASSRPLAS---AIRICTKFSRLSLN---SRSTSKSLIHCMSNVTADVPPVSET 70
Query: 218 KLSFLKAYKRPIPSIYNNVLQELIVQQHLMKYKASYRYDPVFALGFVTVYDKLMEGYPSD 397
K FLKAYKRPIPSIYN VLQELIVQQHLM+YK +YRYDPVFALGFVTVYD+LMEGYPSD
Sbjct: 71 KSKFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLMEGYPSD 130
Query: 398 EDRDAIFQAYINALKEDPEQYRKDAQKLEEWARAQNPTSLVEFSSKEGEVEGILKD 565
+DRDAIF+AYI AL EDP+QYR DAQK+EEWAR+Q SLV+FSSKEG++E +LKD
Sbjct: 131 QDRDAIFKAYIEALNEDPKQYRIDAQKMEEWARSQTSASLVDFSSKEGDIEAVLKD 186
>gb|AAM64943.1| unknown [Arabidopsis thaliana]
Length = 300
Score = 226 bits (576), Expect = 2e-58
Identities = 119/176 (67%), Positives = 139/176 (78%)
Frame = +2
Query: 38 SERKATLSSTRFLASNSEVFRIRTDFSYHYGGVRASNSSSKMVIQCMSSETDVPPPVSET 217
S++ + +S+R LAS RI T FS S S+SK +I CMS+ T PPVSET
Sbjct: 17 SDKISNFASSRPLAS---AIRICTKFSRLSLN---SRSTSKSLIHCMSNVTADVPPVSET 70
Query: 218 KLSFLKAYKRPIPSIYNNVLQELIVQQHLMKYKASYRYDPVFALGFVTVYDKLMEGYPSD 397
K FLKAYKRPIPSIYN VLQELIVQQHLM+YK +YRYDPVFALGFVTVYD+LMEGYPSD
Sbjct: 71 KSKFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLMEGYPSD 130
Query: 398 EDRDAIFQAYINALKEDPEQYRKDAQKLEEWARAQNPTSLVEFSSKEGEVEGILKD 565
+DRDAIF+AYI AL EDP+QYR DAQK+EEWAR+Q SLV+FSSKEG++E +LKD
Sbjct: 131 QDRDAIFKAYIEALNEDPKQYRIDAQKMEEWARSQTSASLVDFSSKEGDIEAVLKD 186
>gb|AAO72565.1| inositol phosphatase-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 287
Score = 215 bits (548), Expect = 3e-55
Identities = 101/137 (73%), Positives = 123/137 (89%)
Frame = +2
Query: 155 SKMVIQCMSSETDVPPPVSETKLSFLKAYKRPIPSIYNNVLQELIVQQHLMKYKASYRYD 334
S+ V++C+++ DVPP V+ETK++FLK+YKRPI SIY+ VLQEL+VQQHLM+YK +Y+YD
Sbjct: 44 SRSVVRCVATAGDVPPTVAETKMNFLKSYKRPILSIYSTVLQELLVQQHLMRYKTTYQYD 103
Query: 335 PVFALGFVTVYDKLMEGYPSDEDRDAIFQAYINALKEDPEQYRKDAQKLEEWARAQNPTS 514
VFALGFVTVYD+LMEGYPS+EDRDAIF+AYI AL EDPEQYR DAQK+EEWAR+QN S
Sbjct: 104 AVFALGFVTVYDQLMEGYPSNEDRDAIFKAYITALNEDPEQYRADAQKMEEWARSQNGNS 163
Query: 515 LVEFSSKEGEVEGILKD 565
LVEFSSK+GE+E ILKD
Sbjct: 164 LVEFSSKDGEIEAILKD 180
>ref|ZP_00073147.1| hypothetical protein [Trichodesmium erythraeum IMS101]
Length = 239
Score = 100 bits (250), Expect = 1e-20
Identities = 46/96 (47%), Positives = 65/96 (66%)
Frame = +2
Query: 206 VSETKLSFLKAYKRPIPSIYNNVLQELIVQQHLMKYKASYRYDPVFALGFVTVYDKLMEG 385
VS+TK +F + RPI SIYN V++EL+V+ HL+ Y Y+P +ALG VT +D+ M+G
Sbjct: 7 VSDTKKTFYHFHTRPINSIYNRVIEELLVEMHLISVNVDYSYNPFYALGVVTAFDRFMQG 66
Query: 386 YPSDEDRDAIFQAYINALKEDPEQYRKDAQKLEEWA 493
Y ED+ +IF A I +EDP +YR DA+ LE+ A
Sbjct: 67 YSPQEDKTSIFNALIQGQEEDPNKYRSDAKGLEDLA 102
>ref|NP_484690.1| hypothetical protein [Nostoc sp. PCC 7120] gi|25381738|pir||AE1887
hypothetical protein all0646 [imported] - Nostoc sp.
(strain PCC 7120) gi|17129992|dbj|BAB72604.1|
ORF_ID:all0646~hypothetical protein [Nostoc sp. PCC
7120]
Length = 233
Score = 100 bits (249), Expect = 1e-20
Identities = 43/115 (37%), Positives = 78/115 (67%)
Frame = +2
Query: 206 VSETKLSFLKAYKRPIPSIYNNVLQELIVQQHLMKYKASYRYDPVFALGFVTVYDKLMEG 385
VS+TK +F + RPI +IY V++EL+V+ HL+ + Y+P++ALG VT +D+ MEG
Sbjct: 7 VSDTKRTFYALHTRPINTIYRRVVEELMVEMHLLSVNVDFSYNPIYALGVVTTFDRFMEG 66
Query: 386 YPSDEDRDAIFQAYINALKEDPEQYRKDAQKLEEWARAQNPTSLVEFSSKEGEVE 550
Y + D+++IF A A++++P++YR+DA++L+ A++ LV + S+ ++
Sbjct: 67 YQPERDKESIFSAICQAVEQEPQRYRQDAERLQAVAQSLPVNDLVAWLSQANHLQ 121
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 528,341,822
Number of Sequences: 1393205
Number of extensions: 12053407
Number of successful extensions: 35384
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 34176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35372
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20669577624
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
