Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019483A_C01 KMC019483A_c01
(606 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P09114|ILV2_TOBAC Acetolactate synthase II, chloroplast precu... 236 2e-61
sp|P09342|ILV1_TOBAC Acetolactate synthase I, chloroplast precur... 236 2e-61
pir||S60056 acetolactate synthase (EC 4.1.3.18) precursor (clone... 234 6e-61
prf||1407140B acetolactate synthase SuRB 233 1e-60
emb|CAA87083.1| acetohydroxyacid synthase [Gossypium hirsutum] 233 1e-60
>sp|P09114|ILV2_TOBAC Acetolactate synthase II, chloroplast precursor (Acetohydroxy-acid
synthase II) (ALS II) gi|68239|pir||YCNT2 acetolactate
synthase (EC 4.1.3.18) class II precursor - common
tobacco gi|19779|emb|CAA30485.1| ALS SuRB gene (AA
1-664) [Nicotiana tabacum]
Length = 664
Score = 236 bits (601), Expect = 2e-61
Identities = 111/123 (90%), Positives = 119/123 (96%)
Frame = -2
Query: 605 LATVKVENLPVKILLLNNQHLGMVVQWEDRFYKANRAHTYLGDPANEAEIFPNMLKFADA 426
LAT+KVENLPVKI+LLNNQHLGMVVQWEDRFYKANRAHTYLG+P+NEAEIFPNMLKFA+A
Sbjct: 542 LATIKVENLPVKIMLLNNQHLGMVVQWEDRFYKANRAHTYLGNPSNEAEIFPNMLKFAEA 601
Query: 425 CGIPAARVMRKDDLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSNGSFKDVITEGDGR 246
CG+PAARV +DDLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPS G+FKDVITEGDGR
Sbjct: 602 CGVPAARVTHRDDLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGR 661
Query: 245 RSY 237
SY
Sbjct: 662 SSY 664
>sp|P09342|ILV1_TOBAC Acetolactate synthase I, chloroplast precursor (Acetohydroxy-acid
synthase I) (ALS I) gi|68238|pir||YCNT1 acetolactate
synthase (EC 4.1.3.18) class I precursor - common
tobacco gi|19777|emb|CAA30484.1| ALS SuRA gene (AA
1-667) [Nicotiana tabacum] gi|226220|prf||1501386A
acetolactate synthase
Length = 667
Score = 236 bits (601), Expect = 2e-61
Identities = 111/123 (90%), Positives = 119/123 (96%)
Frame = -2
Query: 605 LATVKVENLPVKILLLNNQHLGMVVQWEDRFYKANRAHTYLGDPANEAEIFPNMLKFADA 426
LAT+KVENLPVKI+LLNNQHLGMVVQWEDRFYKANRAHTYLG+P+NEAEIFPNMLKFA+A
Sbjct: 545 LATIKVENLPVKIMLLNNQHLGMVVQWEDRFYKANRAHTYLGNPSNEAEIFPNMLKFAEA 604
Query: 425 CGIPAARVMRKDDLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSNGSFKDVITEGDGR 246
CG+PAARV +DDLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPS G+FKDVITEGDGR
Sbjct: 605 CGVPAARVTHRDDLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGR 664
Query: 245 RSY 237
SY
Sbjct: 665 SSY 667
>pir||S60056 acetolactate synthase (EC 4.1.3.18) precursor (clone A19) - upland
cotton
Length = 659
Score = 234 bits (597), Expect = 6e-61
Identities = 110/123 (89%), Positives = 119/123 (96%)
Frame = -2
Query: 605 LATVKVENLPVKILLLNNQHLGMVVQWEDRFYKANRAHTYLGDPANEAEIFPNMLKFADA 426
LAT++VENLPVKILLLNNQHLGMVVQWEDRFYKANRAHTYLGDP+NE+EIFPNMLKFA+A
Sbjct: 537 LATIRVENLPVKILLLNNQHLGMVVQWEDRFYKANRAHTYLGDPSNESEIFPNMLKFAEA 596
Query: 425 CGIPAARVMRKDDLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSNGSFKDVITEGDGR 246
CGIPAARV +K+DL+AAIQKMLDTPGPYLLDVIVPHQEHVLPMIPS G+FKDVITEGDGR
Sbjct: 597 CGIPAARVTKKEDLKAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGR 656
Query: 245 RSY 237
Y
Sbjct: 657 TQY 659
>prf||1407140B acetolactate synthase SuRB
Length = 664
Score = 233 bits (595), Expect = 1e-60
Identities = 111/123 (90%), Positives = 118/123 (95%)
Frame = -2
Query: 605 LATVKVENLPVKILLLNNQHLGMVVQWEDRFYKANRAHTYLGDPANEAEIFPNMLKFADA 426
LAT+KVENLPVKI+LLNNQHLGMVVQWEDRFYKANRAHTYLG+P+NEAEIFPNMLKFA+A
Sbjct: 542 LATIKVENLPVKIMLLNNQHLGMVVQWEDRFYKANRAHTYLGNPSNEAEIFPNMLKFAEA 601
Query: 425 CGIPAARVMRKDDLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSNGSFKDVITEGDGR 246
CG PAARV +DDLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPS G+FKDVITEGDGR
Sbjct: 602 CGNPAARVTHRDDLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGR 661
Query: 245 RSY 237
SY
Sbjct: 662 SSY 664
>emb|CAA87083.1| acetohydroxyacid synthase [Gossypium hirsutum]
Length = 659
Score = 233 bits (595), Expect = 1e-60
Identities = 110/123 (89%), Positives = 119/123 (96%)
Frame = -2
Query: 605 LATVKVENLPVKILLLNNQHLGMVVQWEDRFYKANRAHTYLGDPANEAEIFPNMLKFADA 426
LAT++VENLPVKILLLNNQHLGMVVQWEDRFYKANRAHTYLGDP+NE+EIFPNMLKFA+A
Sbjct: 537 LATMRVENLPVKILLLNNQHLGMVVQWEDRFYKANRAHTYLGDPSNESEIFPNMLKFAEA 596
Query: 425 CGIPAARVMRKDDLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSNGSFKDVITEGDGR 246
CGIPAARV +K+DL+AAIQKMLDTPGPYLLDVIVPHQEHVLPMIPS G+FKDVITEGDGR
Sbjct: 597 CGIPAARVTKKEDLKAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGR 656
Query: 245 RSY 237
Y
Sbjct: 657 TQY 659
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 545,449,825
Number of Sequences: 1393205
Number of extensions: 12571437
Number of successful extensions: 36534
Number of sequences better than 10.0: 350
Number of HSP's better than 10.0 without gapping: 34708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36342
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23997478008
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
