Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019444A_C01 KMC019444A_c01
(526 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC65899.1| OJ1710_H11.6 [Oryza sativa (japonica cultivar-gr... 78 6e-14
ref|NP_199650.1| putative protein; protein id: At5g48390.1 [Arab... 72 4e-12
gb|AAM96992.1| putative protein [Arabidopsis thaliana] gi|231977... 72 4e-12
emb|CAC14169.1| C3VS protein [Canis familiaris] 48 8e-05
emb|CAD39123.1| hypothetical protein [Homo sapiens] 47 2e-04
>dbj|BAC65899.1| OJ1710_H11.6 [Oryza sativa (japonica cultivar-group)]
Length = 637
Score = 78.2 bits (191), Expect = 6e-14
Identities = 44/135 (32%), Positives = 76/135 (55%), Gaps = 3/135 (2%)
Frame = -3
Query: 401 GKENNVESMIEQLAQAFLELEARKGAS---EDKIQWVEIKQHFLDLETALTKKHEELEAR 231
G + ++EQLA+ F +L++ S ++ I W +IK HFL+LE + K +EL +
Sbjct: 11 GSSESTIPLLEQLAEVFGKLKSHTETSLQLQNGINWEDIKAHFLNLEKSYKSKCDELAEK 70
Query: 230 EREYEQKQSEMNTLLAERKEEVARKEQDLLDWLQELKDAAVASIAEAHANNHTGTMESVY 51
++ E+K++E L+AE++ V+ KE+ L+ QEL+D AV++++E +
Sbjct: 71 QKALEEKKAESCRLIAEKEANVSAKERAFLNQFQELRDTAVSALSEVRQKYKVELAGILD 130
Query: 50 EGESKDNKVSNSLDD 6
SKD KV S +D
Sbjct: 131 ANGSKDKKVRTSTND 145
>ref|NP_199650.1| putative protein; protein id: At5g48390.1 [Arabidopsis thaliana]
gi|8777369|dbj|BAA96959.1|
gene_id:MJE7.2~pir||C71412~similar to unknown protein
[Arabidopsis thaliana]
Length = 1337
Score = 72.0 bits (175), Expect = 4e-12
Identities = 38/101 (37%), Positives = 66/101 (64%)
Frame = -3
Query: 392 NNVESMIEQLAQAFLELEARKGASEDKIQWVEIKQHFLDLETALTKKHEELEAREREYEQ 213
++ S I+QL +AF ELE+++ + + ++W E+++HF LE +L ++ ELE +E+EYE
Sbjct: 12 DSTSSKIQQLQKAFAELESQRAVTLN-LKWKELEEHFHGLERSLKRRFHELEDQEKEYET 70
Query: 212 KQSEMNTLLAERKEEVARKEQDLLDWLQELKDAAVASIAEA 90
K + LL ++K V KE+ L+ LQ+ +DAA+ +I A
Sbjct: 71 KTRKAQELLEKKKAAVEAKEKAALERLQKKRDAAMFTINSA 111
>gb|AAM96992.1| putative protein [Arabidopsis thaliana] gi|23197792|gb|AAN15423.1|
putative protein [Arabidopsis thaliana]
Length = 558
Score = 72.0 bits (175), Expect = 4e-12
Identities = 38/101 (37%), Positives = 66/101 (64%)
Frame = -3
Query: 392 NNVESMIEQLAQAFLELEARKGASEDKIQWVEIKQHFLDLETALTKKHEELEAREREYEQ 213
++ S I+QL +AF ELE+++ + + ++W E+++HF LE +L ++ ELE +E+EYE
Sbjct: 12 DSTSSKIQQLQKAFAELESQRAVTLN-LKWKELEEHFHGLERSLKRRFHELEDQEKEYET 70
Query: 212 KQSEMNTLLAERKEEVARKEQDLLDWLQELKDAAVASIAEA 90
K + LL ++K V KE+ L+ LQ+ +DAA+ +I A
Sbjct: 71 KTRKAQELLEKKKAAVEAKEKAALERLQKKRDAAMFTINSA 111
>emb|CAC14169.1| C3VS protein [Canis familiaris]
Length = 1388
Score = 47.8 bits (112), Expect = 8e-05
Identities = 40/137 (29%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Frame = -3
Query: 392 NNVESMIEQLAQAFLELEARKGASEDKIQWVEIKQHFLDLETALTKKHEELEAREREYEQ 213
+ ++S ++ QA +LE R+ K + + DLET ++ +E+L R+YE+
Sbjct: 1174 SKLQSEVQDTKQALQKLETREVVDLSKYKATKS-----DLETQISNLNEKLANLNRKYEE 1228
Query: 212 KQSEMNTLLAERKEEVARKEQDLLDWL--QELK------DAAVASIAEAHANNHTGTMES 57
E+ L A+RK+ A+ E++LL + QE+K D ++ +I E ES
Sbjct: 1229 ACEEV--LRAQRKQLSAKDEKELLHFSIEQEIKDQQERCDKSLTTITELQKR----IQES 1282
Query: 56 VYEGESKDNKVSNSLDD 6
+ E+KDNK++ L+D
Sbjct: 1283 AKQIEAKDNKITELLND 1299
Score = 32.0 bits (71), Expect = 4.5
Identities = 17/46 (36%), Positives = 28/46 (59%)
Frame = -3
Query: 278 DLETALTKKHEELEAREREYEQKQSEMNTLLAERKEEVARKEQDLL 141
D+E AL +K EEL + ++ QK SE+ T + ++ AR+ +LL
Sbjct: 1028 DMERALNRKAEELNKQLKDLLQKYSEIKTEKEKLVDDNARQTSELL 1073
>emb|CAD39123.1| hypothetical protein [Homo sapiens]
Length = 236
Score = 46.6 bits (109), Expect = 2e-04
Identities = 40/137 (29%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Frame = -3
Query: 392 NNVESMIEQLAQAFLELEARKGASEDKIQWVEIKQHFLDLETALTKKHEELEAREREYEQ 213
+ ++S ++ QA +LE R+ K + + DLET ++ +E+L R+YE+
Sbjct: 22 SKLQSEVQNTKQALKKLETREVVDLSKYKATKS-----DLETQISSLNEKLANLNRKYEE 76
Query: 212 KQSEMNTLLAERKEEVARKEQDLLDWL--QELK------DAAVASIAEAHANNHTGTMES 57
E+ L A++KE A+ E++LL + QE+K D ++ +I E ES
Sbjct: 77 VCEEV--LHAKKKEISAKDEKELLHFSIEQEIKDQKERCDKSLTTITELQRR----IQES 130
Query: 56 VYEGESKDNKVSNSLDD 6
+ E+KDNK++ L+D
Sbjct: 131 AKQIEAKDNKITELLND 147
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 428,952,815
Number of Sequences: 1393205
Number of extensions: 9082412
Number of successful extensions: 41955
Number of sequences better than 10.0: 1032
Number of HSP's better than 10.0 without gapping: 36752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41095
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17019769648
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
