Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019440A_C01 KMC019440A_c01
(565 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T51603 monooxygenase 1 [imported] - Arabidopsis thaliana gi... 144 1e-33
ref|NP_193311.2| monooxygenase 1 (MO1), putative; protein id: At... 144 1e-33
pir||H71422 hypothetical protein - Arabidopsis thaliana gi|22449... 117 1e-25
ref|NP_195566.1| monooxygenase 2 (MO2); protein id: At4g38540.1 ... 92 6e-18
gb|AAM61460.1| monooxygenase [Arabidopsis thaliana] 86 3e-16
>pir||T51603 monooxygenase 1 [imported] - Arabidopsis thaliana
gi|3426062|emb|CAA07574.1| monooxygenase [Arabidopsis
thaliana]
Length = 397
Score = 144 bits (362), Expect = 1e-33
Identities = 68/149 (45%), Positives = 107/149 (71%), Gaps = 4/149 (2%)
Frame = -2
Query: 501 DMIQNCMLNFLHLTDLKYRPPWDLILSHFRKGTITIAGDALHATGPFIAQGGSASIEDAI 322
+M++ C + L LT L+YR P +++L FR+GT+T+AGDA+H GPF+AQGGSA++EDA+
Sbjct: 249 EMVKICNVESLTLTHLRYRAPSEIMLGKFRRGTVTVAGDAMHVMGPFLAQGGSAALEDAV 308
Query: 321 VLARCLAQKMHSAKNNAIR---KRDVEEAFHQYAKERKMRIFWISLHSFLIGKKLDAQSF 151
VLARCLA+K+ + ++ +++EEA +Y ER+MR+ +S+ ++L G+ L S
Sbjct: 309 VLARCLARKVGPDHGDLLKDCSMKNIEEAIDEYVDERRMRLLGLSVQTYLTGRSLQTSSK 368
Query: 150 IMKSIIIALMVILF-RDPDWHTRYDCGTL 67
+++ + IAL+++LF RD HTRYDCG L
Sbjct: 369 VLRLMFIALLLLLFGRDQIRHTRYDCGRL 397
>ref|NP_193311.2| monooxygenase 1 (MO1), putative; protein id: At4g15760.1
[Arabidopsis thaliana]
Length = 365
Score = 144 bits (362), Expect = 1e-33
Identities = 68/149 (45%), Positives = 107/149 (71%), Gaps = 4/149 (2%)
Frame = -2
Query: 501 DMIQNCMLNFLHLTDLKYRPPWDLILSHFRKGTITIAGDALHATGPFIAQGGSASIEDAI 322
+M++ C + L LT L+YR P +++L FR+GT+T+AGDA+H GPF+AQGGSA++EDA+
Sbjct: 217 EMVKICNVESLTLTHLRYRAPSEIMLGKFRRGTVTVAGDAMHVMGPFLAQGGSAALEDAV 276
Query: 321 VLARCLAQKMHSAKNNAIR---KRDVEEAFHQYAKERKMRIFWISLHSFLIGKKLDAQSF 151
VLARCLA+K+ + ++ +++EEA +Y ER+MR+ +S+ ++L G+ L S
Sbjct: 277 VLARCLARKVGPDHGDLLKDCSMKNIEEAIDEYVDERRMRLLGLSVQTYLTGRSLQTSSK 336
Query: 150 IMKSIIIALMVILF-RDPDWHTRYDCGTL 67
+++ + IAL+++LF RD HTRYDCG L
Sbjct: 337 VLRLMFIALLLLLFGRDQIRHTRYDCGRL 365
>pir||H71422 hypothetical protein - Arabidopsis thaliana
gi|2244932|emb|CAB10354.1| hypothetical protein
[Arabidopsis thaliana] gi|7268324|emb|CAB78618.1|
hypothetical protein [Arabidopsis thaliana]
Length = 657
Score = 117 bits (292), Expect = 1e-25
Identities = 54/127 (42%), Positives = 89/127 (69%), Gaps = 3/127 (2%)
Frame = -2
Query: 501 DMIQNCMLNFLHLTDLKYRPPWDLILSHFRKGTITIAGDALHATGPFIAQGGSASIEDAI 322
+M++ C + L LT L+YR P +++L FR+GT+T+AGDA+H GPF+AQGGSA++EDA+
Sbjct: 217 EMVKICNVESLTLTHLRYRAPSEIMLGKFRRGTVTVAGDAMHVMGPFLAQGGSAALEDAV 276
Query: 321 VLARCLAQKMHSAKNNAIR---KRDVEEAFHQYAKERKMRIFWISLHSFLIGKKLDAQSF 151
VLARCLA+K+ + ++ +++EEA +Y ER+MR+ +S+ ++L G+ L S
Sbjct: 277 VLARCLARKVGPDHGDLLKDCSMKNIEEAIDEYVDERRMRLLGLSVQTYLTGRSLQTSSK 336
Query: 150 IMKSIII 130
+ I++
Sbjct: 337 LKFLILL 343
>ref|NP_195566.1| monooxygenase 2 (MO2); protein id: At4g38540.1 [Arabidopsis
thaliana] gi|7487957|pir||T05682 monooxygenase (EC
1.-.-.-) 2 - Arabidopsis thaliana
gi|3426064|emb|CAA07575.1| monooxygenase [Arabidopsis
thaliana] gi|4467141|emb|CAB37510.1| monooxygenase 2
(MO2) [Arabidopsis thaliana] gi|7270837|emb|CAB80518.1|
monooxygenase 2 (MO2) [Arabidopsis thaliana]
Length = 407
Score = 91.7 bits (226), Expect = 6e-18
Identities = 43/137 (31%), Positives = 80/137 (58%), Gaps = 7/137 (5%)
Frame = -2
Query: 564 NTSLIRQSLMESMKGFPTHAMDMIQNCMLNFLHLTDLKYRPPWDLILSHFRKGTITIAGD 385
N+ ++++ ++ +K P + ++++ L+ + ++ LKYRPPW+L+ S+ K + +AGD
Sbjct: 232 NSEILKEFVLNKIKDLPENIKNVVETTDLDSMVMSQLKYRPPWELLWSNITKDNVCVAGD 291
Query: 384 ALHATGPFIAQGGSASIEDAIVLARCLAQ-------KMHSAKNNAIRKRDVEEAFHQYAK 226
ALH P I QGG +++ED ++LARCL + K + +N + +EE +YA
Sbjct: 292 ALHPMTPDIGQGGCSAMEDGVILARCLGEAIKAKSLKGETEENEEEGYKRIEEGLKKYAG 351
Query: 225 ERKMRIFWISLHSFLIG 175
ERK R + ++ +G
Sbjct: 352 ERKWRSIDLITTAYTVG 368
>gb|AAM61460.1| monooxygenase [Arabidopsis thaliana]
Length = 392
Score = 85.9 bits (211), Expect = 3e-16
Identities = 46/137 (33%), Positives = 74/137 (53%), Gaps = 7/137 (5%)
Frame = -2
Query: 564 NTSLIRQSLMESMKGFPTHAMDMIQNCMLNFLHLTDLKYRPPWDLILSHFRKGTITIAGD 385
N I+Q ++ +K P + +++ L+ L + L YRPPW+L+ ++ K + +AGD
Sbjct: 231 NHQKIKQFVLTKIKDLPDNIKSILETTDLDSLVMNPLMYRPPWELLWANIAKDNVCVAGD 290
Query: 384 ALHATGPFIAQGGSASIEDAIVLARCLAQKMHSAKNNAIRKRD-------VEEAFHQYAK 226
ALH P I QGG +++ED ++LARCL + M AKN D +E+ +YA
Sbjct: 291 ALHPMTPDIGQGGCSAMEDGVILARCLGEAM-KAKNMKGETEDENESYRRIEDGLKKYAG 349
Query: 225 ERKMRIFWISLHSFLIG 175
RK R + S+ +G
Sbjct: 350 SRKWRSIDLITTSYTVG 366
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 481,557,958
Number of Sequences: 1393205
Number of extensions: 10221934
Number of successful extensions: 24386
Number of sequences better than 10.0: 241
Number of HSP's better than 10.0 without gapping: 23714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24354
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20382500157
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
