Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019412A_C01 KMC019412A_c01
(597 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_568102.1| putative protein; protein id: At5g02540.1, supp... 251 5e-66
ref|NP_181290.1| putative oxidoreductase; protein id: At2g37540.... 251 6e-66
dbj|BAB03618.1| P0009G03.18 [Oryza sativa (japonica cultivar-gro... 249 2e-65
gb|AAM13049.1| putative protein [Arabidopsis thaliana] gi|231981... 249 2e-65
gb|AAM63701.1| putativepod-specific dehydrogenase SAC25 [Arabido... 248 4e-65
>ref|NP_568102.1| putative protein; protein id: At5g02540.1, supported by cDNA:
26538., supported by cDNA: gi_20260301 [Arabidopsis
thaliana]
Length = 331
Score = 251 bits (641), Expect = 5e-66
Identities = 121/176 (68%), Positives = 152/176 (85%)
Frame = +1
Query: 70 VGIFSLVTGMAGPSGFGSATTAEQVSEGIDASNLTAIITGGASGIGLETARVLSLRKVHV 249
+G++SL+TG GPSGFGSA+TAE+V++GIDA+NLTAIITGG GIG+ETARVLS R HV
Sbjct: 1 MGLYSLITGRRGPSGFGSASTAEEVTQGIDATNLTAIITGGTGGIGMETARVLSKRGAHV 60
Query: 250 IIAARNMNSAKEAKQLILQDNESARVDIMKLDLCSLKSVRSFVENFIALGLPLNILINNA 429
+I ARNM +A+ AK IL+ N +ARV +++LDL S+KS+++FV F AL LPLN+LINNA
Sbjct: 61 VIGARNMGAAENAKTEILRQNANARVTLLQLDLSSIKSIKAFVREFHALHLPLNLLINNA 120
Query: 430 GVMFCPFQLSEDGIEMQFATNHLGHFLLTNLLLDKMKQTAKATGIXGRIINLSSIA 597
GVMFCP+QLSEDGIE+QFATNH+GHFLLTNLLLD MK TAK +G+ GRI+N+SS+A
Sbjct: 121 GVMFCPYQLSEDGIELQFATNHIGHFLLTNLLLDTMKNTAKTSGVEGRILNVSSVA 176
>ref|NP_181290.1| putative oxidoreductase; protein id: At2g37540.1, supported by
cDNA: gi_20466184 [Arabidopsis thaliana]
gi|7485438|pir||T02520 probable oxidoreductase
[imported] - Arabidopsis thaliana
gi|3236237|gb|AAC23625.1| putative oxidoreductase
[Arabidopsis thaliana] gi|20466185|gb|AAM20410.1|
putative oxidoreductase [Arabidopsis thaliana]
gi|24899833|gb|AAN65131.1| putative oxidoreductase
[Arabidopsis thaliana]
Length = 321
Score = 251 bits (640), Expect = 6e-66
Identities = 123/176 (69%), Positives = 153/176 (86%)
Frame = +1
Query: 70 VGIFSLVTGMAGPSGFGSATTAEQVSEGIDASNLTAIITGGASGIGLETARVLSLRKVHV 249
+GI+ ++TG G SGFGSA+TAE V++ IDAS+LTAIITGG SGIGLE ARVL++R HV
Sbjct: 1 MGIYGVMTGKKGKSGFGSASTAEDVTQAIDASHLTAIITGGTSGIGLEAARVLAMRGAHV 60
Query: 250 IIAARNMNSAKEAKQLILQDNESARVDIMKLDLCSLKSVRSFVENFIALGLPLNILINNA 429
IIAARN +A E+K++ILQ N +ARVD +++D+ S+KSVRSFV+ F+AL +PLNILINNA
Sbjct: 61 IIAARNPKAANESKEMILQMNPNARVDYLQIDVSSIKSVRSFVDQFLALNVPLNILINNA 120
Query: 430 GVMFCPFQLSEDGIEMQFATNHLGHFLLTNLLLDKMKQTAKATGIXGRIINLSSIA 597
GVMFCPF+L+EDGIE QFATNH+GHFLLTNLLLDKMK TA+ +G+ GRI+NLSSIA
Sbjct: 121 GVMFCPFKLTEDGIESQFATNHIGHFLLTNLLLDKMKSTARESGVQGRIVNLSSIA 176
>dbj|BAB03618.1| P0009G03.18 [Oryza sativa (japonica cultivar-group)]
gi|13872934|dbj|BAB44039.1| P0030H07.1 [Oryza sativa
(japonica cultivar-group)]
Length = 321
Score = 249 bits (636), Expect = 2e-65
Identities = 121/176 (68%), Positives = 148/176 (83%)
Frame = +1
Query: 70 VGIFSLVTGMAGPSGFGSATTAEQVSEGIDASNLTAIITGGASGIGLETARVLSLRKVHV 249
+GI SL+TG AG SGFGS +TAEQV+ G+DA+ LT I+TGGASGIGLET+RV ++R HV
Sbjct: 1 MGILSLITGKAGASGFGSGSTAEQVTAGVDATGLTVIVTGGASGIGLETSRVFAMRGAHV 60
Query: 250 IIAARNMNSAKEAKQLILQDNESARVDIMKLDLCSLKSVRSFVENFIALGLPLNILINNA 429
IIAARN +A ++ I+++N A +D++KLDL SLKSVR+F + F ++ LPLNILINNA
Sbjct: 61 IIAARNTEAASVVRKKIIEENPKAHIDVLKLDLSSLKSVRAFADQFNSMNLPLNILINNA 120
Query: 430 GVMFCPFQLSEDGIEMQFATNHLGHFLLTNLLLDKMKQTAKATGIXGRIINLSSIA 597
GVMFCPF LSEDG+EMQFATNHLGHFLLTNLLLD MK TAK+TGI GRI+NLSS+A
Sbjct: 121 GVMFCPFGLSEDGVEMQFATNHLGHFLLTNLLLDNMKATAKSTGIEGRIVNLSSVA 176
>gb|AAM13049.1| putative protein [Arabidopsis thaliana] gi|23198190|gb|AAN15622.1|
putative protein [Arabidopsis thaliana]
Length = 331
Score = 249 bits (635), Expect = 2e-65
Identities = 120/176 (68%), Positives = 151/176 (85%)
Frame = +1
Query: 70 VGIFSLVTGMAGPSGFGSATTAEQVSEGIDASNLTAIITGGASGIGLETARVLSLRKVHV 249
+G++SL+TG GPSG GSA+TAE+V++GIDA+NLTAIITGG GIG+ETARVLS R HV
Sbjct: 1 MGLYSLITGRRGPSGLGSASTAEEVTQGIDATNLTAIITGGTGGIGMETARVLSKRGAHV 60
Query: 250 IIAARNMNSAKEAKQLILQDNESARVDIMKLDLCSLKSVRSFVENFIALGLPLNILINNA 429
+I ARNM +A+ AK IL+ N +ARV +++LDL S+KS+++FV F AL LPLN+LINNA
Sbjct: 61 VIGARNMGAAENAKTEILRQNANARVTLLQLDLSSIKSIKAFVREFHALHLPLNLLINNA 120
Query: 430 GVMFCPFQLSEDGIEMQFATNHLGHFLLTNLLLDKMKQTAKATGIXGRIINLSSIA 597
GVMFCP+QLSEDGIE+QFATNH+GHFLLTNLLLD MK TAK +G+ GRI+N+SS+A
Sbjct: 121 GVMFCPYQLSEDGIELQFATNHIGHFLLTNLLLDTMKNTAKTSGVEGRILNVSSVA 176
>gb|AAM63701.1| putativepod-specific dehydrogenase SAC25 [Arabidopsis thaliana]
Length = 331
Score = 248 bits (633), Expect = 4e-65
Identities = 120/176 (68%), Positives = 151/176 (85%)
Frame = +1
Query: 70 VGIFSLVTGMAGPSGFGSATTAEQVSEGIDASNLTAIITGGASGIGLETARVLSLRKVHV 249
+G++SL+TG GPSGFGSA+TAE+V++GIDA+NLTAIIT G GIG+ETARVLS R HV
Sbjct: 1 MGLYSLITGRKGPSGFGSASTAEEVTQGIDATNLTAIITRGTGGIGMETARVLSKRGAHV 60
Query: 250 IIAARNMNSAKEAKQLILQDNESARVDIMKLDLCSLKSVRSFVENFIALGLPLNILINNA 429
+I ARNM +A+ AK IL+ N +ARV +++LDL S+KS+++FV F AL LPLN+LINNA
Sbjct: 61 VIGARNMGAAENAKTEILRQNANARVTLLQLDLSSIKSIKAFVREFHALHLPLNLLINNA 120
Query: 430 GVMFCPFQLSEDGIEMQFATNHLGHFLLTNLLLDKMKQTAKATGIXGRIINLSSIA 597
GVMFCP+QLSEDGIE+QFATNH+GHFLLTNLLLD MK TAK +G+ GRI+N+SS+A
Sbjct: 121 GVMFCPYQLSEDGIELQFATNHIGHFLLTNLLLDTMKNTAKTSGVEGRILNVSSVA 176
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 515,612,925
Number of Sequences: 1393205
Number of extensions: 11391065
Number of successful extensions: 45591
Number of sequences better than 10.0: 2517
Number of HSP's better than 10.0 without gapping: 43001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44576
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23140425222
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
