Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019310A_C01 KMC019310A_c01
(1280 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T06827 lipoxygenase (EC 1.13.11.12) - garden pea gi|2459611... 313 0.0
sp|P24095|LOXX_SOYBN Seed lipoxygenase gi|99932|pir||S13381 lipo... 309 e-174
pir||S18612 lipoxygenase (EC 1.13.11.12) - soybean (fragment) gi... 309 e-174
pir||T06454 probable lipoxygenase (EC 1.13.11.12) - garden pea g... 302 e-174
pir||T06429 lipoxygenase (EC 1.13.11.12) vlxC - soybean gi|12624... 298 e-174
>pir||T06827 lipoxygenase (EC 1.13.11.12) - garden pea gi|2459611|gb|AAB71759.1|
lipoxygenase [Pisum sativum]
Length = 868
Score = 313 bits (803), Expect(4) = 0.0
Identities = 153/185 (82%), Positives = 165/185 (88%)
Frame = +3
Query: 468 MFILDYHDAFMPYLEKINKLPSSKAYATRTILFLKDDGALTPLAIELSLPHPNGVKYGAE 647
+F+LDYHDAFMPYLE+IN S+KAYATRTILFLKDDG L PLAIELSLPH NG++YGAE
Sbjct: 436 LFLLDYHDAFMPYLERINI--SAKAYATRTILFLKDDGTLKPLAIELSLPHSNGIQYGAE 493
Query: 648 SKVVLPAKEGAEGTIWLLAKAHVIVNDSGYHQLITHWLNTHATIEPFAIATNRHLSALHP 827
SKV LPA+EG E TIWLLAKAHV+VNDS YHQL++HWLNTHA +EPF IATNRHLS LHP
Sbjct: 494 SKVFLPAEEGVESTIWLLAKAHVVVNDSSYHQLMSHWLNTHAVMEPFIIATNRHLSVLHP 553
Query: 828 INKLLYPHYRDTININALARASLINAEGIIEQSFLPGEYSLEISSVVYKNWVFPDQALPA 1007
INKLLYPHYRDTININ LAR SLINA GIIEQSFLPG S+EISS VYKNWVF DQALPA
Sbjct: 554 INKLLYPHYRDTININGLARQSLINAGGIIEQSFLPGPNSIEISSTVYKNWVFTDQALPA 613
Query: 1008 DLIKR 1022
DLIKR
Sbjct: 614 DLIKR 618
Score = 239 bits (610), Expect(4) = 0.0
Identities = 116/138 (84%), Positives = 128/138 (92%)
Frame = +1
Query: 55 LFKSVIFDLNFTPNEFDSFDEVRGLYEGGIKLPTNIISQISPLPVLKEIFRTDGENVLQF 234
LF+SVIFDLNFTPNEFDSFDEVRGLYEGGIKLPT+IIS+ISPLP LKEIFRTDGE VL+F
Sbjct: 298 LFQSVIFDLNFTPNEFDSFDEVRGLYEGGIKLPTDIISKISPLPALKEIFRTDGEQVLKF 357
Query: 235 PPPHVIRVSKSAWMTDVEFGREMIAGVNPNVIRLLQEFPPKSTLDVNGFGDQNSTLTKEH 414
PPPHVI+VSKSAWMTD EFGRE++AGVNP VIRLLQEFPPKS+LD +GDQ+ST+TKEH
Sbjct: 358 PPPHVIKVSKSAWMTDEEFGREILAGVNPCVIRLLQEFPPKSSLDATIYGDQSSTITKEH 417
Query: 415 LEINLGGLTVDEALGAKR 468
LE NLGGLTV+EAL KR
Sbjct: 418 LETNLGGLTVEEALNGKR 435
Score = 125 bits (314), Expect(4) = 0.0
Identities = 54/63 (85%), Positives = 59/63 (92%)
Frame = +2
Query: 1091 RGMAVEDPSAPHGVRLVLEDYPYAVDGLEIWDAIKKWVQDYVSLYYPSDDAVQKDTELQA 1270
RG+AVEDPS+PHG+RLV+EDYPYAVDGLEIWDAIK WVQDYVSLYYP+DD VQKD ELQ
Sbjct: 618 RGLAVEDPSSPHGLRLVIEDYPYAVDGLEIWDAIKAWVQDYVSLYYPTDDTVQKDIELQT 677
Query: 1271 WWK 1279
WWK
Sbjct: 678 WWK 680
Score = 26.6 bits (57), Expect(4) = 0.0
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3
Query: 3 SSDFLTYGIKSLSQSV 50
SSDFL +GIKSLS V
Sbjct: 280 SSDFLMFGIKSLSHDV 295
>sp|P24095|LOXX_SOYBN Seed lipoxygenase gi|99932|pir||S13381 lipoxygenase (EC 1.13.11.12) -
soybean gi|18746|emb|CAA39604.1| lipoxygenase [Glycine
max]
Length = 864
Score = 309 bits (791), Expect(4) = e-174
Identities = 148/185 (80%), Positives = 164/185 (88%)
Frame = +3
Query: 468 MFILDYHDAFMPYLEKINKLPSSKAYATRTILFLKDDGALTPLAIELSLPHPNGVKYGAE 647
+FILDY DAF+PYL +IN LP++KAYATRTILFLKDDG L PLAIELS PHP+G G E
Sbjct: 430 LFILDYQDAFIPYLTRINSLPTAKAYATRTILFLKDDGTLKPLAIELSKPHPDGDNLGPE 489
Query: 648 SKVVLPAKEGAEGTIWLLAKAHVIVNDSGYHQLITHWLNTHATIEPFAIATNRHLSALHP 827
S VVLPA EG + TIWLLAKAHVIVNDSGYHQL++HWLNTHA +EPFAIATNRHLS LHP
Sbjct: 490 SIVVLPATEGVDSTIWLLAKAHVIVNDSGYHQLVSHWLNTHAVMEPFAIATNRHLSVLHP 549
Query: 828 INKLLYPHYRDTININALARASLINAEGIIEQSFLPGEYSLEISSVVYKNWVFPDQALPA 1007
I KLLYPHYRDTININ LAR SLINA+GIIE+SFLPG+YS+E+SS VYKNWVF DQALPA
Sbjct: 550 IYKLLYPHYRDTININGLARQSLINADGIIEKSFLPGKYSIEMSSSVYKNWVFTDQALPA 609
Query: 1008 DLIKR 1022
DL+KR
Sbjct: 610 DLVKR 614
Score = 217 bits (552), Expect(4) = e-174
Identities = 105/138 (76%), Positives = 119/138 (86%)
Frame = +1
Query: 55 LFKSVIFDLNFTPNEFDSFDEVRGLYEGGIKLPTNIISQISPLPVLKEIFRTDGENVLQF 234
LFKS IF L T +EF+SF++VR LYEGGIKLPT+I+SQISPLP LKEIFRTDGENVLQF
Sbjct: 292 LFKSAIFQLRVTSSEFESFEDVRSLYEGGIKLPTDILSQISPLPALKEIFRTDGENVLQF 351
Query: 235 PPPHVIRVSKSAWMTDVEFGREMIAGVNPNVIRLLQEFPPKSTLDVNGFGDQNSTLTKEH 414
PPPHV +VSKS WMTD EF RE+IAGVNPNVIR LQEFPPKSTLD +GDQ ST+TKE
Sbjct: 352 PPPHVAKVSKSGWMTDEEFAREVIAGVNPNVIRRLQEFPPKSTLDPTLYGDQTSTITKEQ 411
Query: 415 LEINLGGLTVDEALGAKR 468
LEIN+GG+TV+EAL +R
Sbjct: 412 LEINMGGVTVEEALSTQR 429
Score = 123 bits (309), Expect(4) = e-174
Identities = 53/63 (84%), Positives = 60/63 (95%)
Frame = +2
Query: 1091 RGMAVEDPSAPHGVRLVLEDYPYAVDGLEIWDAIKKWVQDYVSLYYPSDDAVQKDTELQA 1270
RG+A+EDPSAPHG+RLV+EDYPYAVDGLEIWDAIK WV +YVSLYYP+D AVQ+DTELQA
Sbjct: 614 RGLAIEDPSAPHGLRLVIEDYPYAVDGLEIWDAIKTWVHEYVSLYYPTDAAVQQDTELQA 673
Query: 1271 WWK 1279
WWK
Sbjct: 674 WWK 676
Score = 30.4 bits (67), Expect(4) = e-174
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3
Query: 3 SSDFLTYGIKSLSQSV 50
SSDFLTYGIKSLS V
Sbjct: 274 SSDFLTYGIKSLSHDV 289
>pir||S18612 lipoxygenase (EC 1.13.11.12) - soybean (fragment)
gi|242462|gb|AAB20898.1| lipoxygenase [Glycine max]
Length = 599
Score = 309 bits (791), Expect(4) = e-174
Identities = 148/185 (80%), Positives = 164/185 (88%)
Frame = +3
Query: 468 MFILDYHDAFMPYLEKINKLPSSKAYATRTILFLKDDGALTPLAIELSLPHPNGVKYGAE 647
+FILDY DAF+PYL +IN LP++KAYATRTILFLKDDG L PLAIELS PHP+G G E
Sbjct: 165 LFILDYQDAFIPYLTRINSLPTAKAYATRTILFLKDDGTLKPLAIELSKPHPDGDNLGPE 224
Query: 648 SKVVLPAKEGAEGTIWLLAKAHVIVNDSGYHQLITHWLNTHATIEPFAIATNRHLSALHP 827
S VVLPA EG + TIWLLAKAHVIVNDSGYHQL++HWLNTHA +EPFAIATNRHLS LHP
Sbjct: 225 SIVVLPATEGVDSTIWLLAKAHVIVNDSGYHQLVSHWLNTHAVMEPFAIATNRHLSVLHP 284
Query: 828 INKLLYPHYRDTININALARASLINAEGIIEQSFLPGEYSLEISSVVYKNWVFPDQALPA 1007
I KLLYPHYRDTININ LAR SLINA+GIIE+SFLPG+YS+E+SS VYKNWVF DQALPA
Sbjct: 285 IYKLLYPHYRDTININGLARQSLINADGIIEKSFLPGKYSIEMSSSVYKNWVFTDQALPA 344
Query: 1008 DLIKR 1022
DL+KR
Sbjct: 345 DLVKR 349
Score = 217 bits (552), Expect(4) = e-174
Identities = 105/138 (76%), Positives = 119/138 (86%)
Frame = +1
Query: 55 LFKSVIFDLNFTPNEFDSFDEVRGLYEGGIKLPTNIISQISPLPVLKEIFRTDGENVLQF 234
LFKS IF L T +EF+SF++VR LYEGGIKLPT+I+SQISPLP LKEIFRTDGENVLQF
Sbjct: 27 LFKSAIFQLRVTSSEFESFEDVRSLYEGGIKLPTDILSQISPLPALKEIFRTDGENVLQF 86
Query: 235 PPPHVIRVSKSAWMTDVEFGREMIAGVNPNVIRLLQEFPPKSTLDVNGFGDQNSTLTKEH 414
PPPHV +VSKS WMTD EF RE+IAGVNPNVIR LQEFPPKSTLD +GDQ ST+TKE
Sbjct: 87 PPPHVAKVSKSGWMTDEEFAREVIAGVNPNVIRRLQEFPPKSTLDPTLYGDQTSTITKEQ 146
Query: 415 LEINLGGLTVDEALGAKR 468
LEIN+GG+TV+EAL +R
Sbjct: 147 LEINMGGVTVEEALSTQR 164
Score = 123 bits (309), Expect(4) = e-174
Identities = 53/63 (84%), Positives = 60/63 (95%)
Frame = +2
Query: 1091 RGMAVEDPSAPHGVRLVLEDYPYAVDGLEIWDAIKKWVQDYVSLYYPSDDAVQKDTELQA 1270
RG+A+EDPSAPHG+RLV+EDYPYAVDGLEIWDAIK WV +YVSLYYP+D AVQ+DTELQA
Sbjct: 349 RGLAIEDPSAPHGLRLVIEDYPYAVDGLEIWDAIKTWVHEYVSLYYPTDAAVQQDTELQA 408
Query: 1271 WWK 1279
WWK
Sbjct: 409 WWK 411
Score = 30.4 bits (67), Expect(4) = e-174
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3
Query: 3 SSDFLTYGIKSLSQSV 50
SSDFLTYGIKSLS V
Sbjct: 9 SSDFLTYGIKSLSHDV 24
>pir||T06454 probable lipoxygenase (EC 1.13.11.12) - garden pea
gi|2598612|emb|CAA75609.1| lipoxygenase [Pisum sativum]
Length = 866
Score = 302 bits (774), Expect(4) = e-174
Identities = 144/185 (77%), Positives = 167/185 (89%)
Frame = +3
Query: 468 MFILDYHDAFMPYLEKINKLPSSKAYATRTILFLKDDGALTPLAIELSLPHPNGVKYGAE 647
+FILDYHDAF+PYL KINK ++KAYATRTILFLKDDG L PLAIELSLPHP+G++YGAE
Sbjct: 434 LFILDYHDAFIPYLNKINK--NAKAYATRTILFLKDDGTLKPLAIELSLPHPSGLQYGAE 491
Query: 648 SKVVLPAKEGAEGTIWLLAKAHVIVNDSGYHQLITHWLNTHATIEPFAIATNRHLSALHP 827
SKV+LP+ +G + TIWLL+KAHVIVNDS YHQL++HWLNTHA +EPF IATNRHLS LHP
Sbjct: 492 SKVILPSDQGVDSTIWLLSKAHVIVNDSCYHQLMSHWLNTHAVVEPFIIATNRHLSVLHP 551
Query: 828 INKLLYPHYRDTININALARASLINAEGIIEQSFLPGEYSLEISSVVYKNWVFPDQALPA 1007
IN+LL PH+RDTININ+LARA+LINA+GIIEQ+FLPG S+E+SS YKNWVF DQALPA
Sbjct: 552 INRLLDPHFRDTININSLARAALINADGIIEQTFLPGPSSVEMSSAAYKNWVFTDQALPA 611
Query: 1008 DLIKR 1022
DLIKR
Sbjct: 612 DLIKR 616
Score = 225 bits (574), Expect(4) = e-174
Identities = 111/138 (80%), Positives = 125/138 (90%)
Frame = +1
Query: 55 LFKSVIFDLNFTPNEFDSFDEVRGLYEGGIKLPTNIISQISPLPVLKEIFRTDGENVLQF 234
LFKSVIFDLNFTPNEFDSFDE L+EGGI+LPTN++S+ISPLPVLKEIFRTDGE VL+F
Sbjct: 297 LFKSVIFDLNFTPNEFDSFDE-DALFEGGIELPTNVLSKISPLPVLKEIFRTDGEQVLKF 355
Query: 235 PPPHVIRVSKSAWMTDVEFGREMIAGVNPNVIRLLQEFPPKSTLDVNGFGDQNSTLTKEH 414
PPPHVI+VSKSAWMTD EFGREMIAGVNP VIRLL+EFPPKSTLD +GDQ ST+ KEH
Sbjct: 356 PPPHVIKVSKSAWMTDEEFGREMIAGVNPCVIRLLKEFPPKSTLDTTLYGDQTSTIKKEH 415
Query: 415 LEINLGGLTVDEALGAKR 468
LEINLGGLTV++A+ +R
Sbjct: 416 LEINLGGLTVEKAVNDQR 433
Score = 119 bits (297), Expect(4) = e-174
Identities = 52/63 (82%), Positives = 58/63 (91%)
Frame = +2
Query: 1091 RGMAVEDPSAPHGVRLVLEDYPYAVDGLEIWDAIKKWVQDYVSLYYPSDDAVQKDTELQA 1270
RG+AVED S+PHG+RLV+EDYPYAVDGLEIW AIK WVQDYVSLYYP+D+ VQKDTELQ
Sbjct: 616 RGLAVEDSSSPHGLRLVIEDYPYAVDGLEIWYAIKIWVQDYVSLYYPTDEVVQKDTELQT 675
Query: 1271 WWK 1279
WWK
Sbjct: 676 WWK 678
Score = 32.3 bits (72), Expect(4) = e-174
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +3
Query: 3 SSDFLTYGIKSLSQSV 50
SSDFLTYGIKSLSQ V
Sbjct: 279 SSDFLTYGIKSLSQDV 294
>pir||T06429 lipoxygenase (EC 1.13.11.12) vlxC - soybean gi|1262440|gb|AAA96817.1|
lipoxygenase
Length = 859
Score = 298 bits (763), Expect(4) = e-174
Identities = 148/185 (80%), Positives = 159/185 (85%)
Frame = +3
Query: 468 MFILDYHDAFMPYLEKINKLPSSKAYATRTILFLKDDGALTPLAIELSLPHPNGVKYGAE 647
+FILDYHDAF PYL KIN LP +KAYATRTILFLKDDG+L PLAIELS P
Sbjct: 432 LFILDYHDAFFPYLTKINSLPIAKAYATRTILFLKDDGSLKPLAIELSKP-------ATV 484
Query: 648 SKVVLPAKEGAEGTIWLLAKAHVIVNDSGYHQLITHWLNTHATIEPFAIATNRHLSALHP 827
SKVVLPA EG E TIWLLAKAHVIVNDSGYHQLI+HWLNTHA +EPFAIATNRHLS LHP
Sbjct: 485 SKVVLPATEGVESTIWLLAKAHVIVNDSGYHQLISHWLNTHAVMEPFAIATNRHLSVLHP 544
Query: 828 INKLLYPHYRDTININALARASLINAEGIIEQSFLPGEYSLEISSVVYKNWVFPDQALPA 1007
I KLLYPHY+DTININ LAR SLINA GIIEQ+FLPG+YS+E+SSVVYKNWVF DQALPA
Sbjct: 545 IYKLLYPHYKDTININGLARQSLINAGGIIEQTFLPGKYSIEMSSVVYKNWVFTDQALPA 604
Query: 1008 DLIKR 1022
DL+KR
Sbjct: 605 DLVKR 609
Score = 227 bits (578), Expect(4) = e-174
Identities = 111/138 (80%), Positives = 122/138 (87%)
Frame = +1
Query: 55 LFKSVIFDLNFTPNEFDSFDEVRGLYEGGIKLPTNIISQISPLPVLKEIFRTDGENVLQF 234
LFKS+I +L T +EFDSFDEVRGL+EGGIKLPTNI+SQISPLPVLKEIFRTDGEN LQF
Sbjct: 294 LFKSIILNLRVTSSEFDSFDEVRGLFEGGIKLPTNILSQISPLPVLKEIFRTDGENTLQF 353
Query: 235 PPPHVIRVSKSAWMTDVEFGREMIAGVNPNVIRLLQEFPPKSTLDVNGFGDQNSTLTKEH 414
PPPHVIRVSKS WMTD EF REMIAGVNPNVIR LQEFPPKSTLD +GDQ ST+TK+
Sbjct: 354 PPPHVIRVSKSGWMTDDEFAREMIAGVNPNVIRRLQEFPPKSTLDPATYGDQTSTITKQQ 413
Query: 415 LEINLGGLTVDEALGAKR 468
LEINLGG+TV+EA+ A R
Sbjct: 414 LEINLGGVTVEEAISAHR 431
Score = 120 bits (301), Expect(4) = e-174
Identities = 51/63 (80%), Positives = 60/63 (94%)
Frame = +2
Query: 1091 RGMAVEDPSAPHGVRLVLEDYPYAVDGLEIWDAIKKWVQDYVSLYYPSDDAVQKDTELQA 1270
RG+AVEDPSAPHG+RLV+EDYPYAVDGLEIWDAIK WV +YVS+YYP++ A+Q+DTELQA
Sbjct: 609 RGLAVEDPSAPHGLRLVIEDYPYAVDGLEIWDAIKTWVHEYVSVYYPTNAAIQQDTELQA 668
Query: 1271 WWK 1279
WWK
Sbjct: 669 WWK 671
Score = 32.7 bits (73), Expect(4) = e-174
Identities = 15/16 (93%), Positives = 16/16 (99%)
Frame = +3
Query: 3 SSDFLTYGIKSLSQSV 50
SSDFLTYGIKSLSQ+V
Sbjct: 276 SSDFLTYGIKSLSQNV 291
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,060,290,858
Number of Sequences: 1393205
Number of extensions: 23224470
Number of successful extensions: 79696
Number of sequences better than 10.0: 216
Number of HSP's better than 10.0 without gapping: 72480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 79437
length of database: 448,689,247
effective HSP length: 126
effective length of database: 273,145,417
effective search space used: 81943625100
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
