KMC019229A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC019229A_C01 KMC019229A_c01
tctgaacgccatttcagaatcactcaacacgagcgccaccaccggctcaggttacccaat
tccgatgcggtggctttagcCTCGGCTTGAGGCTGTGCCATTGCATATGTGATGGCCTAG
GAGCCATGCAGTTTCTAGCTGCATGGGCCGCCACAGCAAAATCAGGGTCGCTGGTTATTG
ACCCTAAGCCTTGTTGGGACAGGGAAATGTTCAAACCTCGGCACCCGCCCATGGTGAAAT
TCCCACACATGGAGTTCATGAGAATCGAGGAAGGCTCCAACCTGACAATAACACTATGGC
AAACCAAGCCCGTTCAGAAGTGTTATAGGATCCAGCGAGAGTTCCAAAACTACTTGAAAA
CTCTCGCTCAGCCATCCGATGCTGCAGGCTGCACCACTTTCGATGCCATGGCAGCTCACA
TTTGGAGATCCTGGGTGAAAGCTCTTGATGTGAGACCACTAGATTACACCCTCAGGTTAA
CATTTTCAGTCAATGCTAGGCCAAAGCTTAGAAACCCACCTCTGAGAGAAGGGTTCTACG
GCAATGTGGTGTGTGTCGCGTGCACAACAAGCTCTGTGTCAGAGCTTGTGCATGGACAAC
TCCCTGAGACTACTCGTCTGGTTCGCGAAGCCAGACAAAGTGTCTCAGAGGAGTACCTAA
GATCCACGGTGGATTATGTTGATGTGGACAGGCCGAAGCAGCTTGAGTTTGGGGGAAAAC
TAACTATTACACAATGGACCAGGTTCTCAATGTACAAGAGTGCAGATTTTGGGTGGGGTA
AGCCACTATATGCTGGTCCTATAGATTTAACACCCACGCCTCAGGTTTGTGTGTTTCTAC
CTGAAGGGGAGGCTGCTGATTGTAGCGGCTCTATGATTGTGTGCATATGCTTGCCTGAGT
CTGCTGCGCAGAAGTTTACACAAGCATTGTTGCTTGATTCAGTGTTGACAGAGTAAACCT
TGTGCTGAAAATCTCATATATGttcctcttctggatttagttcatatataatgttgtcaa
taaagcatcaacattgatgcattttatatataattccatatt


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC019229A_C01 KMC019229A_c01
         (1062 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_171838.1| hypothetical protein; protein id: At1g03390.1 [...   437  e-121
ref|NP_174083.1| putative hypersensitivity-related protein; prot...   172  6e-42
dbj|BAB09706.1| N-hydroxycinnamoyl/benzoyltransferase-like prote...   171  2e-41
ref|NP_568587.1| N-hydroxycinnamoyl/benzoyltransferase-like prot...   171  2e-41
ref|NP_190441.1| putative protein; protein id: At3g48720.1 [Arab...   164  2e-39

>ref|NP_171838.1| hypothetical protein; protein id: At1g03390.1 [Arabidopsis thaliana]
            gi|7485920|pir||T00918 hypothetical protein F21B7.32 -
            Arabidopsis thaliana gi|9280672|gb|AAF86541.1|AC002560_34
            F21B7.2 [Arabidopsis thaliana]
          Length = 461

 Score =  437 bits (1125), Expect = e-121
 Identities = 207/300 (69%), Positives = 244/300 (81%), Gaps = 2/300 (0%)
 Frame = +3

Query: 45   AQVTQFRCGGFSLGLRLCHCICDGLGAMQFLAAWAATAKSGSLVIDPKPCWDREMFKPRH 224
            AQVT F CGGFSLG+RLCHCICDG GAMQFL +WAATAK+G L+ DP+P WDRE FKPR+
Sbjct: 159  AQVTFFTCGGFSLGIRLCHCICDGFGAMQFLGSWAATAKTGKLIADPEPVWDRETFKPRN 218

Query: 225  PPMVKFPHMEFMRIEEGSNLTITLWQTKPVQKCYRIQREFQNYLKTLAQPSDAA-GCTTF 401
            PPMVK+PH E++ IEE SNLT +LW TKP+QKCYRI +EFQ  +K++AQ  D    C+TF
Sbjct: 219  PPMVKYPHHEYLPIEERSNLTNSLWDTKPLQKCYRISKEFQCRVKSIAQGEDPTLVCSTF 278

Query: 402  DAMAAHIWRSWVKALDVRPLDYTLRLTFSVNARPKLRNPPLREGFYGNVVCVACTTSSVS 581
            DAMAAHIWRSWVKALDV+PLDY LRLTFSVN R +L    LR+GFYGNVVC+AC  SSV 
Sbjct: 279  DAMAAHIWRSWVKALDVKPLDYNLRLTFSVNVRTRLETLKLRKGFYGNVVCLACAMSSVE 338

Query: 582  ELVHGQLPETTRLVREARQSVSEEYLRSTVDYVDVDRPKQLEFGGKLTITQWTRFSMYKS 761
             L++  L +TTRLV++AR  VSE+YLRS VDYVDV RPK+LEFGGKLTITQWTRF MY++
Sbjct: 339  SLINDSLSKTTRLVQDARLRVSEDYLRSMVDYVDVKRPKRLEFGGKLTITQWTRFEMYET 398

Query: 762  ADFGWGKPLYAGPIDLTPTPQVCVFLPEGEAADCSG-SMIVCICLPESAAQKFTQALLLD 938
            ADFGWGKP+YAGPIDL PTPQVCV LP+G     +  SM+VC+CLP +A   FT+ L L+
Sbjct: 399  ADFGWGKPVYAGPIDLRPTPQVCVLLPQGGVESGNDQSMVVCLCLPPTAVHTFTRLLSLN 458

>ref|NP_174083.1| putative hypersensitivity-related protein; protein id: At1g27620.1
            [Arabidopsis thaliana]
            gi|5668772|gb|AAD45999.1|AC005916_11 Similar to gb|Z84571
            anthranilate N-hydroxycinnamoyl/benzoyltransferase from
            Dianthus caryophyllus. [Arabidopsis thaliana]
            gi|6693014|gb|AAF24940.1|AC012375_3 T22C5.6 [Arabidopsis
            thaliana]
          Length = 442

 Score =  172 bits (437), Expect = 6e-42
 Identities = 104/304 (34%), Positives = 167/304 (54%), Gaps = 5/304 (1%)
 Frame = +3

Query: 36   PPPAQVTQFRCGGFSLGLRLCHCICDGLGAMQFLAAWAATAKSGSLVIDPKPCWDREMFK 215
            P   QVT  RCGG  L   + HC+CDG+G  QFL AWA  A +    +  +P   R +  
Sbjct: 136  PLVIQVTYLRCGGMILCTAINHCLCDGIGTSQFLHAWAH-ATTSQAHLPTRPFHSRHVLD 194

Query: 216  PRHPPMVKFPHMEFMR---IEEGSNLTITLW-QTKPVQKC-YRIQREFQNYLKTLAQPSD 380
            PR+PP V   H  F R   +++ S   I+ + Q++P+        +     LK    PS 
Sbjct: 195  PRNPPRVTHSHPGFTRTTTVDKSSTFDISKYLQSQPLAPATLTFNQSHLLRLKKTCAPS- 253

Query: 381  AAGCTTFDAMAAHIWRSWVKALDVRPLDYTLRLTFSVNARPKLRNPPLREGFYGNVVCVA 560
               CTTF+A+AA+ WRSW ++LD+ P+   ++L FSVN R +L  P L +G+YGN   +A
Sbjct: 254  -LKCTTFEALAANTWRSWAQSLDL-PMTMLVKLLFSVNMRKRL-TPELPQGYYGNGFVLA 310

Query: 561  CTTSSVSELVHGQLPETTRLVREARQSVSEEYLRSTVDYVDVDRPKQLEFGGKLTITQWT 740
            C  S V +LV+G +    + ++EA+  +++EY+RST+D ++ D+  + +    L I+QW 
Sbjct: 311  CAESKVQDLVNGNIYHAVKSIQEAKSRITDEYVRSTIDLLE-DKTVKTDVSCSLVISQWA 369

Query: 741  RFSMYKSADFGWGKPLYAGPIDLTPTPQVCVFLPEGEAADCSGSMIVCICLPESAAQKFT 920
            +  + +  D G GKP+Y GP+    +   C+FLP    A  + ++ V + LPE   ++  
Sbjct: 370  KLGL-EELDLGGGKPMYMGPL---TSDIYCLFLP---VASDNDAIRVQMSLPEEVVKRLE 422

Query: 921  QALL 932
              ++
Sbjct: 423  YCMV 426

>dbj|BAB09706.1| N-hydroxycinnamoyl/benzoyltransferase-like protein [Arabidopsis
            thaliana]
          Length = 441

 Score =  171 bits (433), Expect = 2e-41
 Identities = 104/303 (34%), Positives = 164/303 (53%), Gaps = 4/303 (1%)
 Frame = +3

Query: 36   PPPAQVTQFRCGGFSLGLRLCHCICDGLGAMQFLAAWAATAKSGSLVIDPKPCWDREMFK 215
            P  AQVT+F+CGGF LGL + HC+ DG+GAM+F+ +W   A+   L +   P  DR +  
Sbjct: 147  PVTAQVTKFKCGGFVLGLCMNHCMFDGIGAMEFVNSWGQVAR--GLPLTTPPFSDRTILN 204

Query: 216  PRHPPMVKFPHMEFMRIEEGSNLTITLWQTKPVQKCYRIQREFQNYLKTLAQPSDAA--- 386
             R+PP ++  H EF  IE+ SN+     +   + + +    E    LK  A  +  +   
Sbjct: 205  ARNPPKIENLHQEFEEIEDKSNINSLYTKEPTLYRSFCFDPEKIKKLKLQATENSESLLG 264

Query: 387  -GCTTFDAMAAHIWRSWVKALDVRPLDYTLRLTFSVNARPKLRNPPLREGFYGNVVCVAC 563
              CT+F+A++A +WR+  K+L +   D   +L F+V+ R K   P L +G++GN + +  
Sbjct: 265  NSCTSFEALSAFVWRARTKSLKMLS-DQKTKLLFAVDGRAKF-EPQLPKGYFGNGIVLTN 322

Query: 564  TTSSVSELVHGQLPETTRLVREARQSVSEEYLRSTVDYVDVDRPKQLEFGGKLTITQWTR 743
            +     EL+   L     LVREA + V++ Y+RS +DY +V R +       L IT W+R
Sbjct: 323  SICEAGELIEKPLSFAVGLVREAIKMVTDGYMRSAIDYFEVTRARP-SLSSTLLITTWSR 381

Query: 744  FSMYKSADFGWGKPLYAGPIDLTPTPQVCVFLPEGEAADCSGSMIVCICLPESAAQKFTQ 923
               + + DFGWG+P+ +GP+ L P  +V +FL  GE      S+ V + LP +A   F +
Sbjct: 382  LG-FHTTDFGWGEPILSGPVAL-PEKEVTLFLSHGEQ---RRSINVLLGLPATAMDVFQE 436

Query: 924  ALL 932
              L
Sbjct: 437  QFL 439

>ref|NP_568587.1| N-hydroxycinnamoyl/benzoyltransferase-like protein; protein id:
            At5g41040.1, supported by cDNA: gi_14334525, supported by
            cDNA: gi_17104562 [Arabidopsis thaliana]
            gi|14334526|gb|AAK59460.1| putative
            N-hydroxycinnamoyl/benzoyltransferase [Arabidopsis
            thaliana] gi|17104563|gb|AAL34170.1| putative
            N-hydroxycinnamoyl/benzoyltransferase [Arabidopsis
            thaliana]
          Length = 457

 Score =  171 bits (433), Expect = 2e-41
 Identities = 104/303 (34%), Positives = 164/303 (53%), Gaps = 4/303 (1%)
 Frame = +3

Query: 36   PPPAQVTQFRCGGFSLGLRLCHCICDGLGAMQFLAAWAATAKSGSLVIDPKPCWDREMFK 215
            P  AQVT+F+CGGF LGL + HC+ DG+GAM+F+ +W   A+   L +   P  DR +  
Sbjct: 163  PVTAQVTKFKCGGFVLGLCMNHCMFDGIGAMEFVNSWGQVAR--GLPLTTPPFSDRTILN 220

Query: 216  PRHPPMVKFPHMEFMRIEEGSNLTITLWQTKPVQKCYRIQREFQNYLKTLAQPSDAA--- 386
             R+PP ++  H EF  IE+ SN+     +   + + +    E    LK  A  +  +   
Sbjct: 221  ARNPPKIENLHQEFEEIEDKSNINSLYTKEPTLYRSFCFDPEKIKKLKLQATENSESLLG 280

Query: 387  -GCTTFDAMAAHIWRSWVKALDVRPLDYTLRLTFSVNARPKLRNPPLREGFYGNVVCVAC 563
              CT+F+A++A +WR+  K+L +   D   +L F+V+ R K   P L +G++GN + +  
Sbjct: 281  NSCTSFEALSAFVWRARTKSLKMLS-DQKTKLLFAVDGRAKF-EPQLPKGYFGNGIVLTN 338

Query: 564  TTSSVSELVHGQLPETTRLVREARQSVSEEYLRSTVDYVDVDRPKQLEFGGKLTITQWTR 743
            +     EL+   L     LVREA + V++ Y+RS +DY +V R +       L IT W+R
Sbjct: 339  SICEAGELIEKPLSFAVGLVREAIKMVTDGYMRSAIDYFEVTRARP-SLSSTLLITTWSR 397

Query: 744  FSMYKSADFGWGKPLYAGPIDLTPTPQVCVFLPEGEAADCSGSMIVCICLPESAAQKFTQ 923
               + + DFGWG+P+ +GP+ L P  +V +FL  GE      S+ V + LP +A   F +
Sbjct: 398  LG-FHTTDFGWGEPILSGPVAL-PEKEVTLFLSHGEQ---RRSINVLLGLPATAMDVFQE 452

Query: 924  ALL 932
              L
Sbjct: 453  QFL 455

>ref|NP_190441.1| putative protein; protein id: At3g48720.1 [Arabidopsis thaliana]
            gi|11280571|pir||T46216 hypothetical protein T8P19.230 -
            Arabidopsis thaliana gi|6523103|emb|CAB62361.1| putative
            protein [Arabidopsis thaliana]
          Length = 430

 Score =  164 bits (415), Expect = 2e-39
 Identities = 101/299 (33%), Positives = 167/299 (55%), Gaps = 1/299 (0%)
 Frame = +3

Query: 36   PPPAQVTQFRCGGFSLGLRLCHCICDGLGAMQFLAAWAATAKSGSLVIDPKPCWDREMFK 215
            P   QVT F+CGGF LGL + H + DG+ A +FL +W   AK   L +   P  DR + +
Sbjct: 140  PVVVQVTNFKCGGFVLGLGMSHNMFDGVAAAEFLNSWCEMAK--GLPLSVPPFLDRTILR 197

Query: 216  PRHPPMVKFPHMEFMRIEEGSNLTITLWQTKPVQKCYRIQREFQNYLKTLA-QPSDAAGC 392
             R+PP ++FPH EF  IE+ S+      + K + K +  + E    LK +A + ++    
Sbjct: 198  SRNPPKIEFPHNEFDEIEDISDTGKIYDEEKLIYKSFLFEPEKLEKLKIMAIEENNNNKV 257

Query: 393  TTFDAMAAHIWRSWVKALDVRPLDYTLRLTFSVNARPKLRNPPLREGFYGNVVCVACTTS 572
            +TF A+   +W+S  +AL  +P D  ++L F+ + R +   P L +G+ GN + +    +
Sbjct: 258  STFQALTGFLWKSRCEALRFKP-DQRVKLLFAADGRSRF-IPRLPQGYCGNGIVLTGLVT 315

Query: 573  SVSELVHGQLPETTRLVREARQSVSEEYLRSTVDYVDVDRPKQLEFGGKLTITQWTRFSM 752
            S  ELV   L  +  LV+   + V++ ++RS +DY +V+R +       L IT W++ ++
Sbjct: 316  SSGELVGNPLSHSVGLVKRLVELVTDGFMRSAMDYFEVNRTRP-SMNATLLITSWSKLTL 374

Query: 753  YKSADFGWGKPLYAGPIDLTPTPQVCVFLPEGEAADCSGSMIVCICLPESAAQKFTQAL 929
            +K  DFGWG+P+++GP+ L P  +V +FLP G   D   S+ V + LP SA + F + +
Sbjct: 375  HK-LDFGWGEPVFSGPVGL-PGREVILFLPSG---DDMKSINVFLGLPTSAMEVFEELM 428

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 977,062,564
Number of Sequences: 1393205
Number of extensions: 23083511
Number of successful extensions: 55946
Number of sequences better than 10.0: 182
Number of HSP's better than 10.0 without gapping: 52837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55625
length of database: 448,689,247
effective HSP length: 124
effective length of database: 275,931,827
effective search space used: 63188388383
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 MFB010a06_f BP034601 1 592
2 MFB083c02_f BP040058 538 1062




Lotus japonicus
Kazusa DNA Research Institute