Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019207A_C01 KMC019207A_c01
(592 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB61847.1| P0712E02.10 [Oryza sativa (japonica cultivar-gro... 174 8e-43
ref|NP_565091.1| expressed protein; protein id: At1g74730.1, sup... 168 4e-41
pir||E96776 hypothetical protein F25A4.30 [imported] - Arabidops... 168 4e-41
gb|AAL47451.1| AT5g08050/F13G24_250 [Arabidopsis thaliana] 72 5e-12
ref|NP_196422.1| putative protein; protein id: At5g08050.1, supp... 72 5e-12
>dbj|BAB61847.1| P0712E02.10 [Oryza sativa (japonica cultivar-group)]
gi|21644685|dbj|BAC01242.1| OSJNBb0024F06.20 [Oryza
sativa (japonica cultivar-group)]
Length = 187
Score = 174 bits (441), Expect = 8e-43
Identities = 93/127 (73%), Positives = 109/127 (85%)
Frame = -2
Query: 591 GSEQVDVDVFKKLEKSKVLSTVERAGLLSKAEELGVTLSSIEKLGLFSKAEELGLLSLLE 412
GSE+V+VDVFKKLE+ KVLSTVE+AGLLS+AEELGVTLSS+E+LGL SKAE+LGLLSL+E
Sbjct: 61 GSEEVEVDVFKKLERRKVLSTVEKAGLLSRAEELGVTLSSLEELGLLSKAEDLGLLSLVE 120
Query: 411 SAAGFSPSVLASASIPALVAALAAVVLIPDDSAGLVVVQDVVAAVFGVGAVGLLVGSVVL 232
+AA SP LAS S+P LVAA+AAVVL+PDDSA LV +Q V+AAV A GL VGSVVL
Sbjct: 121 AAAAASPDALASVSLPLLVAAIAAVVLVPDDSAALVALQAVLAAVLLAAAAGLFVGSVVL 180
Query: 231 GGLQEAD 211
GLQE+D
Sbjct: 181 AGLQESD 187
>ref|NP_565091.1| expressed protein; protein id: At1g74730.1, supported by cDNA:
12408., supported by cDNA: gi_14423495 [Arabidopsis
thaliana] gi|14423496|gb|AAK62430.1|AF386985_1 Unknown
protein [Arabidopsis thaliana]
gi|25084056|gb|AAN72163.1| Unknown protein [Arabidopsis
thaliana]
Length = 198
Score = 168 bits (426), Expect = 4e-41
Identities = 92/127 (72%), Positives = 107/127 (83%)
Frame = -2
Query: 591 GSEQVDVDVFKKLEKSKVLSTVERAGLLSKAEELGVTLSSIEKLGLFSKAEELGLLSLLE 412
GSEQ++VDVFKKLEK KVLS VE++GLLSKAE LG+TLSS+EKL +FSKAE+LGLLSLLE
Sbjct: 72 GSEQINVDVFKKLEKRKVLSNVEKSGLLSKAEGLGLTLSSLEKLKVFSKAEDLGLLSLLE 131
Query: 411 SAAGFSPSVLASASIPALVAALAAVVLIPDDSAGLVVVQDVVAAVFGVGAVGLLVGSVVL 232
+ AG SP+VLASA++PAL AA+ AVVLIPDDS LVV Q V+A + V LLVGSVVL
Sbjct: 132 NLAGTSPAVLASAALPALTAAIVAVVLIPDDSTTLVVAQAVLAGALALTGVVLLVGSVVL 191
Query: 231 GGLQEAD 211
GLQEAD
Sbjct: 192 DGLQEAD 198
>pir||E96776 hypothetical protein F25A4.30 [imported] - Arabidopsis thaliana
gi|5882720|gb|AAD55273.1|AC008263_4 Similar to gb|D86180
phosphoribosylanthranilate transferase from Pisum sativum
and contains 2 PF|00168 C2 (phospholipid binding)
domains. ESTs gb|H76726, gb|T45544 and gb|N96377 come
from this gene. [Arabidopsis thaliana]
Length = 1276
Score = 168 bits (426), Expect = 4e-41
Identities = 92/127 (72%), Positives = 107/127 (83%)
Frame = -2
Query: 591 GSEQVDVDVFKKLEKSKVLSTVERAGLLSKAEELGVTLSSIEKLGLFSKAEELGLLSLLE 412
GSEQ++VDVFKKLEK KVLS VE++GLLSKAE LG+TLSS+EKL +FSKAE+LGLLSLLE
Sbjct: 1150 GSEQINVDVFKKLEKRKVLSNVEKSGLLSKAEGLGLTLSSLEKLKVFSKAEDLGLLSLLE 1209
Query: 411 SAAGFSPSVLASASIPALVAALAAVVLIPDDSAGLVVVQDVVAAVFGVGAVGLLVGSVVL 232
+ AG SP+VLASA++PAL AA+ AVVLIPDDS LVV Q V+A + V LLVGSVVL
Sbjct: 1210 NLAGTSPAVLASAALPALTAAIVAVVLIPDDSTTLVVAQAVLAGALALTGVVLLVGSVVL 1269
Query: 231 GGLQEAD 211
GLQEAD
Sbjct: 1270 DGLQEAD 1276
>gb|AAL47451.1| AT5g08050/F13G24_250 [Arabidopsis thaliana]
Length = 158
Score = 72.0 bits (175), Expect = 5e-12
Identities = 43/121 (35%), Positives = 71/121 (58%)
Frame = -2
Query: 573 VDVFKKLEKSKVLSTVERAGLLSKAEELGVTLSSIEKLGLFSKAEELGLLSLLESAAGFS 394
V + ++E+ K+L+ E+AGLLS AE+ G +LS+IE+LGL +KAEE G+LS + +
Sbjct: 40 VKLLTRVEQLKLLTKAEKAGLLSLAEKSGFSLSTIERLGLLTKAEEFGVLSAATNPE--T 97
Query: 393 PSVLASASIPALVAALAAVVLIPDDSAGLVVVQDVVAAVFGVGAVGLLVGSVVLGGLQEA 214
P L + S+ L+ ++P+D VV+Q +VA + +G S + LQ++
Sbjct: 98 PGTLFTLSLGLLLLGPVFAYVVPEDYTWEVVIQVLVALLSVLGGSAAFAASGFVSNLQKS 157
Query: 213 D 211
D
Sbjct: 158 D 158
>ref|NP_196422.1| putative protein; protein id: At5g08050.1, supported by cDNA:
gi_17978980 [Arabidopsis thaliana]
gi|11285545|pir||T45630 hypothetical protein F13G24.250
- Arabidopsis thaliana gi|6562319|emb|CAB62617.1|
putative protein [Arabidopsis thaliana]
Length = 158
Score = 72.0 bits (175), Expect = 5e-12
Identities = 43/121 (35%), Positives = 71/121 (58%)
Frame = -2
Query: 573 VDVFKKLEKSKVLSTVERAGLLSKAEELGVTLSSIEKLGLFSKAEELGLLSLLESAAGFS 394
V + ++E+ K+L+ E+AGLLS AE+ G +LS+IE+LGL +KAEE G+LS + +
Sbjct: 40 VKLLTRVEQLKLLTKAEKAGLLSLAEKSGFSLSTIERLGLLTKAEEFGVLSAATNPE--T 97
Query: 393 PSVLASASIPALVAALAAVVLIPDDSAGLVVVQDVVAAVFGVGAVGLLVGSVVLGGLQEA 214
P L + S+ L+ ++P+D VV+Q +VA + +G S + LQ++
Sbjct: 98 PGTLFTLSLGLLLLGPVFAYVVPEDYTWEVVIQVLVALLSVLGGSAAFAASGFVSNLQKS 157
Query: 213 D 211
D
Sbjct: 158 D 158
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 545,297,595
Number of Sequences: 1393205
Number of extensions: 13319288
Number of successful extensions: 102777
Number of sequences better than 10.0: 1899
Number of HSP's better than 10.0 without gapping: 72065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 94609
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22569056698
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
