Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019198A_C01 KMC019198A_c01
(478 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_194836.1| putative protein; protein id: At4g31070.1 [Arab... 104 4e-22
ref|NP_179644.1| unknown protein; protein id: At2g20540.1 [Arabi... 80 1e-14
pir||E86224 hypothetical protein [imported] - Arabidopsis thalia... 80 1e-14
ref|NP_172391.1| hypothetical protein; protein id: At1g09190.1 [... 80 1e-14
dbj|BAC43004.1| unknown protein [Arabidopsis thaliana] gi|289507... 77 9e-14
>ref|NP_194836.1| putative protein; protein id: At4g31070.1 [Arabidopsis thaliana]
gi|25407709|pir||H85363 hypothetical protein AT4g31070
[imported] - Arabidopsis thaliana
gi|2980759|emb|CAA18186.1| putative protein [Arabidopsis
thaliana] gi|7270009|emb|CAB79825.1| putative protein
[Arabidopsis thaliana]
Length = 613
Score = 104 bits (260), Expect = 4e-22
Identities = 49/90 (54%), Positives = 68/90 (75%), Gaps = 1/90 (1%)
Frame = -1
Query: 478 ALEIMRTMPMKPSTRIWSSLVSACKLHGRLDIA-EMLGPQLIRSEPDNAANYTLLNMIYA 302
A E+ MPMKPS RIWSSL+SAC+ HGRLD+A +++ +L++SEPDN ANY LL+ I+
Sbjct: 508 AFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHT 567
Query: 301 EHGHWLHKEQVMEAMKLQRLKKCYGFSRIE 212
E G++ E+V M+ ++L KCYGFS+IE
Sbjct: 568 ESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
>ref|NP_179644.1| unknown protein; protein id: At2g20540.1 [Arabidopsis thaliana]
gi|25346332|pir||E84590 hypothetical protein At2g20540
[imported] - Arabidopsis thaliana
gi|4586036|gb|AAD25654.1| unknown protein [Arabidopsis
thaliana]
Length = 534
Score = 80.1 bits (196), Expect = 1e-14
Identities = 38/92 (41%), Positives = 58/92 (62%)
Frame = -1
Query: 478 ALEIMRTMPMKPSTRIWSSLVSACKLHGRLDIAEMLGPQLIRSEPDNAANYTLLNMIYAE 299
A+EI +TMPMKP ++IW SL+S+C+ G LD+A + L+ EP++ NY LL IYA+
Sbjct: 397 AVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYAD 456
Query: 298 HGHWLHKEQVMEAMKLQRLKKCYGFSRIETGN 203
G W ++ + ++ + +KK G S IE N
Sbjct: 457 LGKWEDVSRLRKMIRNENMKKTPGGSLIEVNN 488
>pir||E86224 hypothetical protein [imported] - Arabidopsis thaliana
gi|3249103|gb|AAC24086.1| Contains similarity to
membrane-associated salt-inducible protein homolog
TM021B04.10 gb|2191192 from A. thaliana BAC gb|AF007271.
[Arabidopsis thaliana] gi|28393182|gb|AAO42022.1|
unknown protein [Arabidopsis thaliana]
Length = 484
Score = 79.7 bits (195), Expect = 1e-14
Identities = 36/88 (40%), Positives = 55/88 (61%)
Frame = -1
Query: 478 ALEIMRTMPMKPSTRIWSSLVSACKLHGRLDIAEMLGPQLIRSEPDNAANYTLLNMIYAE 299
A + ++ MP+ + +W SL+SAC+ HG + +AE+ +L++ EP N+ NY LL+ +YAE
Sbjct: 392 AFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAE 451
Query: 298 HGHWLHKEQVMEAMKLQRLKKCYGFSRI 215
G W E+V MK RL+K G S I
Sbjct: 452 EGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
>ref|NP_172391.1| hypothetical protein; protein id: At1g09190.1 [Arabidopsis thaliana]
Length = 999
Score = 79.7 bits (195), Expect = 1e-14
Identities = 36/88 (40%), Positives = 55/88 (61%)
Frame = -1
Query: 478 ALEIMRTMPMKPSTRIWSSLVSACKLHGRLDIAEMLGPQLIRSEPDNAANYTLLNMIYAE 299
A + ++ MP+ + +W SL+SAC+ HG + +AE+ +L++ EP N+ NY LL+ +YAE
Sbjct: 907 AFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAE 966
Query: 298 HGHWLHKEQVMEAMKLQRLKKCYGFSRI 215
G W E+V MK RL+K G S I
Sbjct: 967 EGRWQDVEKVRTLMKKNRLRKSTGQSTI 994
>dbj|BAC43004.1| unknown protein [Arabidopsis thaliana] gi|28950761|gb|AAO63304.1|
At1g33350 [Arabidopsis thaliana]
Length = 219
Score = 77.0 bits (188), Expect = 9e-14
Identities = 37/93 (39%), Positives = 54/93 (57%)
Frame = -1
Query: 478 ALEIMRTMPMKPSTRIWSSLVSACKLHGRLDIAEMLGPQLIRSEPDNAANYTLLNMIYAE 299
ALE+M TM MK IW SL++ACK+HG LD+AE+ L+ P+N ++ +Y E
Sbjct: 100 ALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGE 159
Query: 298 HGHWLHKEQVMEAMKLQRLKKCYGFSRIETGNQ 200
G+W + + +K Q K G+SRIE N+
Sbjct: 160 MGNWEEARRARKMIKHQNAYKPPGWSRIEIDNE 192
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 374,881,501
Number of Sequences: 1393205
Number of extensions: 6969205
Number of successful extensions: 14378
Number of sequences better than 10.0: 334
Number of HSP's better than 10.0 without gapping: 13887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14343
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 13106568690
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
