Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019170A_C01 KMC019170A_c01
(497 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD40929.1| OSJNBa0033G16.8 [Oryza sativa (japonica cultivar... 157 8e-38
ref|NP_187773.1| digalactosyldiacylglycerol synthase; protein id... 133 1e-30
gb|AAO16600.1| digalactosyldiacylglycerol synthase [Xerophyta hu... 88 3e-17
ref|NP_191964.2| similar to digalactosyldiacylglycerol; protein ... 69 2e-11
gb|EAA02653.1| ebiP335 [Anopheles gambiae str. PEST] 33 2.3
>emb|CAD40929.1| OSJNBa0033G16.8 [Oryza sativa (japonica cultivar-group)]
Length = 775
Score = 157 bits (396), Expect = 8e-38
Identities = 83/163 (50%), Positives = 104/163 (62%)
Frame = -3
Query: 492 PLDVAELLAYFVKQSGPFLDQLGVRRDVCDKIVESLYSKRKNQLLLPSLSGEESSLLGNG 313
PLD+ E+LAY V+QSGPFLDQLG+RRD+CDKIVE+LYSK +L+ SLS + S L+GN
Sbjct: 207 PLDLTEILAYLVRQSGPFLDQLGIRRDLCDKIVETLYSKHNGRLIYHSLSADRS-LIGNE 265
Query: 312 NINDELDLRIASVLQSTGHRNEGGFWTDHAKHDLSDNERHVAIITTC*SALDDGNSCKPA 133
N+ DELDLRIA VL+STGH E FW DHAK+ LSDN RHVAI+TT G + P
Sbjct: 266 NMTDELDLRIARVLESTGHHTEESFWKDHAKYKLSDNRRHVAIVTTASLPWMTGTAINPL 325
Query: 132 VSSCIFITI*KAESHSAGSMALQIRSRTSLSQHLTFTSPEEQE 4
+ K + + ++TF+SPEEQE
Sbjct: 326 FRAAYLARSTKQKVTLVVPWLCKSDQELVYPNNITFSSPEEQE 368
Score = 90.1 bits (222), Expect = 1e-17
Identities = 40/46 (86%), Positives = 45/46 (96%)
Frame = -1
Query: 173 ASLPWMTGTAVNPLFRAAYLSQSEKQKVTLLVPWLCKSDQELVYPS 36
ASLPWMTGTA+NPLFRAAYL++S KQKVTL+VPWLCKSDQELVYP+
Sbjct: 312 ASLPWMTGTAINPLFRAAYLARSTKQKVTLVVPWLCKSDQELVYPN 357
>ref|NP_187773.1| digalactosyldiacylglycerol synthase; protein id: At3g11670.1,
supported by cDNA: gi_18700088, supported by cDNA:
gi_20855997, supported by cDNA: gi_5354157 [Arabidopsis
thaliana] gi|5354158|gb|AAD42378.1|AF149841_1
digalactosyldiacylglycerol synthase [Arabidopsis
thaliana] gi|5354160|gb|AAD42379.1|AF149842_1
digalactosyldiacylglycerol synthase [Arabidopsis
thaliana] gi|6041825|gb|AAF02140.1|AC009918_12
digalactosyldiacylglycerol synthase [Arabidopsis
thaliana] gi|18700089|gb|AAL77656.1| AT3g11670/T19F11_7
[Arabidopsis thaliana] gi|20855998|gb|AAM26642.1|
AT3g11670/T19F11_7 [Arabidopsis thaliana]
Length = 808
Score = 133 bits (335), Expect = 1e-30
Identities = 77/164 (46%), Positives = 96/164 (57%)
Frame = -3
Query: 495 PPLDVAELLAYFVKQSGPFLDQLGVRRDVCDKIVESLYSKRKNQLLLPSLSGEESSLLGN 316
PPLDV ELLA V+QS PFLDQ+GVR+D CD+IVESL K K+Q L S + S L+ N
Sbjct: 246 PPLDVPELLACLVRQSEPFLDQIGVRKDTCDRIVESL-CKCKSQQLWRLPSAQASDLIEN 304
Query: 315 GNINDELDLRIASVLQSTGHRNEGGFWTDHAKHDLSDNERHVAIITTC*SALDDGNSCKP 136
N +LD+RIASVLQSTGH +GGFWTD K + +N+RHVAI+TT G + P
Sbjct: 305 DNHGVDLDMRIASVLQSTGHHYDGGFWTDFVKPETPENKRHVAIVTTASLPWMTGTAVNP 364
Query: 135 AVSSCIFITI*KAESHSAGSMALQIRSRTSLSQHLTFTSPEEQE 4
+ K + +LTF+SPEEQE
Sbjct: 365 LFRAAYLAKAAKQSVTLVVPWLCESDQELVYPNNLTFSSPEEQE 408
Score = 85.9 bits (211), Expect = 2e-16
Identities = 38/46 (82%), Positives = 44/46 (95%)
Frame = -1
Query: 173 ASLPWMTGTAVNPLFRAAYLSQSEKQKVTLLVPWLCKSDQELVYPS 36
ASLPWMTGTAVNPLFRAAYL+++ KQ VTL+VPWLC+SDQELVYP+
Sbjct: 352 ASLPWMTGTAVNPLFRAAYLAKAAKQSVTLVVPWLCESDQELVYPN 397
>gb|AAO16600.1| digalactosyldiacylglycerol synthase [Xerophyta humilis]
Length = 465
Score = 87.8 bits (216), Expect(2) = 3e-17
Identities = 39/46 (84%), Positives = 45/46 (97%)
Frame = -1
Query: 173 ASLPWMTGTAVNPLFRAAYLSQSEKQKVTLLVPWLCKSDQELVYPS 36
ASLPWMTGTAVNPLFRAAYL++S KQ+VTL+VPWLC+SDQELVYP+
Sbjct: 3 ASLPWMTGTAVNPLFRAAYLAKSAKQRVTLVVPWLCESDQELVYPN 48
Score = 21.6 bits (44), Expect(2) = 3e-17
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -3
Query: 33 LTFTSPEEQE 4
LTF SPEEQE
Sbjct: 50 LTFGSPEEQE 59
>ref|NP_191964.2| similar to digalactosyldiacylglycerol; protein id: At4g00550.1,
supported by cDNA: gi_18141111 [Arabidopsis thaliana]
gi|18141112|gb|AAL60504.1|AF421193_1
digalactosyldiacylglycerol synthase [Arabidopsis
thaliana]
Length = 473
Score = 69.3 bits (168), Expect = 2e-11
Identities = 29/46 (63%), Positives = 39/46 (84%)
Frame = -1
Query: 173 ASLPWMTGTAVNPLFRAAYLSQSEKQKVTLLVPWLCKSDQELVYPS 36
AS+PW+TGTAVNPLFRAAYL+ +++VTL++PWL Q+LVYP+
Sbjct: 15 ASIPWLTGTAVNPLFRAAYLANDGERRVTLVIPWLTLKHQKLVYPN 60
>gb|EAA02653.1| ebiP335 [Anopheles gambiae str. PEST]
Length = 371
Score = 32.7 bits (73), Expect = 2.3
Identities = 24/74 (32%), Positives = 43/74 (57%), Gaps = 3/74 (4%)
Frame = -3
Query: 402 KIVESLYSKRKNQLLLPSLSGEESSLLGNGNINDELD-LRIA-SVLQSTGHRNEGGF-WT 232
KIV+ + + + ++ + S+ GE +L+ N + N +LD L+IA S L G++++ T
Sbjct: 224 KIVDKINNLQAVEMRMESIKGERDNLIINDSYNLDLDSLKIALSTLNQYGNKSQKVLVLT 283
Query: 231 DHAKHDLSDNERHV 190
D HD+ DN H+
Sbjct: 284 D--IHDVKDNSEHL 295
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 432,753,456
Number of Sequences: 1393205
Number of extensions: 8983637
Number of successful extensions: 23807
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 23327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23800
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 14783057727
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
