Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019126A_C01 KMC019126A_c01
(602 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T15054 anther-specific protein - wood tobacco gi|2326772|em... 267 9e-71
ref|NP_171707.1| unknown protein; protein id: At1g02050.1 [Arabi... 266 2e-70
gb|AAM63363.1| putative chalcone synthase [Arabidopsis thaliana] 240 9e-63
pir||T10742 chalcone synthase homolog ChS1 - Monterey pine gi|25... 239 3e-62
ref|NP_191915.1| putative chalcone synthase; protein id: At4g000... 238 3e-62
>pir||T15054 anther-specific protein - wood tobacco gi|2326772|emb|CAA74847.1|
anther-specific protein [Nicotiana sylvestris]
gi|2326774|emb|CAA74846.1| anther-specific protein
[Nicotiana sylvestris]
Length = 363
Score = 267 bits (682), Expect = 9e-71
Identities = 131/157 (83%), Positives = 144/157 (91%)
Frame = +2
Query: 131 IGKAFPAQVIPQECLVEGYIRDTKCEDSYVKEKLERLCKNTTVKTRYTVMSKEILDNYPE 310
+GKAFPAQ++PQ+CLVEGYIRDT C+D +KEKLERLCK TTVKTRYTVMSKEILD YPE
Sbjct: 1 MGKAFPAQLVPQDCLVEGYIRDTNCQDLAIKEKLERLCKTTTVKTRYTVMSKEILDKYPE 60
Query: 311 LATEGTPTIRQKLEIANPAVVEMAAKASLACINEWGQXSTDLITHIVYVSSSEIRLPGGD 490
LATEGTPTI+Q+LEIANPAVVEMA +AS ACI EWG+ S + ITHIVYVSSSEIRLPGGD
Sbjct: 61 LATEGTPTIKQRLEIANPAVVEMAKQASQACIKEWGR-SAEEITHIVYVSSSEIRLPGGD 119
Query: 491 LYLANELGLRSDVSRVMLYFLGCYGGVTGLRVAKDIA 601
LYLA ELGLR+D+ RVMLYFLGCYGGVTGLRVAKDIA
Sbjct: 120 LYLATELGLRNDIGRVMLYFLGCYGGVTGLRVAKDIA 156
>ref|NP_171707.1| unknown protein; protein id: At1g02050.1 [Arabidopsis thaliana]
gi|25286664|pir||E86152 chalcone synthase homolog
T7I23.4 - Arabidopsis thaliana gi|2317904|gb|AAC24368.1|
Similar to rice chalcone synthase homolog,
gp|U90341|2507617 and anther specific protein,
gp|Y14507|2326772 [Arabidopsis thaliana]
Length = 395
Score = 266 bits (679), Expect = 2e-70
Identities = 131/187 (70%), Positives = 156/187 (83%)
Frame = +2
Query: 41 MAQGDSNGSSMQRAARAKRAPTPGKATILAIGKAFPAQVIPQECLVEGYIRDTKCEDSYV 220
M+ NG + +R GKAT+LA+GKAFP+QV+PQE LVEG++RDTKC+D+++
Sbjct: 1 MSNSRMNGVEKLSSKSTRRVANAGKATLLALGKAFPSQVVPQENLVEGFLRDTKCDDAFI 60
Query: 221 KEKLERLCKNTTVKTRYTVMSKEILDNYPELATEGTPTIRQKLEIANPAVVEMAAKASLA 400
KEKLE LCK TTVKTRYTV+++EIL YPEL TEG+PTI+Q+LEIAN AVVEMA +ASL
Sbjct: 61 KEKLEHLCKTTTVKTRYTVLTREILAKYPELTTEGSPTIKQRLEIANEAVVEMALEASLG 120
Query: 401 CINEWGQXSTDLITHIVYVSSSEIRLPGGDLYLANELGLRSDVSRVMLYFLGCYGGVTGL 580
CI EWG+ D ITHIVYVSSSEIRLPGGDLYL+ +LGLR+DV+RVMLYFLGCYGGVTGL
Sbjct: 121 CIKEWGRPVED-ITHIVYVSSSEIRLPGGDLYLSAKLGLRNDVNRVMLYFLGCYGGVTGL 179
Query: 581 RVAKDIA 601
RVAKDIA
Sbjct: 180 RVAKDIA 186
>gb|AAM63363.1| putative chalcone synthase [Arabidopsis thaliana]
Length = 385
Score = 240 bits (613), Expect = 9e-63
Identities = 118/175 (67%), Positives = 144/175 (81%)
Frame = +2
Query: 77 RAARAKRAPTPGKATILAIGKAFPAQVIPQECLVEGYIRDTKCEDSYVKEKLERLCKNTT 256
R + KR GKAT+LA+GKA P+ V+ QE LVE Y+R+ KC+D +K+KL+ LCK+TT
Sbjct: 6 RVEKQKRVAYQGKATVLALGKALPSNVVSQENLVEEYLREIKCDDLSIKDKLQHLCKSTT 65
Query: 257 VKTRYTVMSKEILDNYPELATEGTPTIRQKLEIANPAVVEMAAKASLACINEWGQXSTDL 436
VKTRYTVMS+E L YPELATEG+PTI+Q+LEIAN AVV+MA +ASL CI EWG+ D
Sbjct: 66 VKTRYTVMSRETLHKYPELATEGSPTIKQRLEIANDAVVQMAYEASLVCIKEWGRAVED- 124
Query: 437 ITHIVYVSSSEIRLPGGDLYLANELGLRSDVSRVMLYFLGCYGGVTGLRVAKDIA 601
ITH+VYVSSSE RLPGGDLYL+ +LGL ++V RVMLYFLGCYGG++GLRVAKDIA
Sbjct: 125 ITHLVYVSSSEFRLPGGDLYLSAQLGLSNEVQRVMLYFLGCYGGLSGLRVAKDIA 179
>pir||T10742 chalcone synthase homolog ChS1 - Monterey pine
gi|2507617|gb|AAB80804.1| chalcone synthase homolog
PrChS1 [Pinus radiata]
Length = 390
Score = 239 bits (609), Expect = 3e-62
Identities = 118/182 (64%), Positives = 146/182 (79%)
Frame = +2
Query: 56 SNGSSMQRAARAKRAPTPGKATILAIGKAFPAQVIPQECLVEGYIRDTKCEDSYVKEKLE 235
SNG++ A +++R PGK T +A G+AFP Q++ QE LV+GY R+T C+D +++KLE
Sbjct: 4 SNGTNGVVAVKSRRQHRPGKTTAMAFGRAFPDQLVMQEFLVDGYFRNTNCQDPVLRQKLE 63
Query: 236 RLCKNTTVKTRYTVMSKEILDNYPELATEGTPTIRQKLEIANPAVVEMAAKASLACINEW 415
RLCK TTVKTRY VMS EIL +PELA EG+ T+RQ+LEI+N AV +MA A C+ EW
Sbjct: 64 RLCKTTTVKTRYVVMSDEILAQHPELAVEGSATVRQRLEISNVAVTDMAVDACRDCLKEW 123
Query: 416 GQXSTDLITHIVYVSSSEIRLPGGDLYLANELGLRSDVSRVMLYFLGCYGGVTGLRVAKD 595
G+ ++ ITH+VYVSSSEIRLPGGDLYLA+ LGLRSDVSRVMLYFLGCYGGVTGLRVAKD
Sbjct: 124 GRPVSE-ITHLVYVSSSEIRLPGGDLYLASRLGLRSDVSRVMLYFLGCYGGVTGLRVAKD 182
Query: 596 IA 601
+A
Sbjct: 183 LA 184
>ref|NP_191915.1| putative chalcone synthase; protein id: At4g00040.1, supported by
cDNA: 21877. [Arabidopsis thaliana]
gi|7433798|pir||T01332 hypothetical protein F6N15.12 -
Arabidopsis thaliana gi|3193317|gb|AAC19299.1| similar
to plant chalcone and stilbene synthases [Arabidopsis
thaliana] gi|7267091|emb|CAB80762.1| putative chalcone
synthase [Arabidopsis thaliana]
gi|25082809|gb|AAN72004.1| Unknown protein [Arabidopsis
thaliana]
Length = 385
Score = 238 bits (608), Expect = 3e-62
Identities = 117/175 (66%), Positives = 144/175 (81%)
Frame = +2
Query: 77 RAARAKRAPTPGKATILAIGKAFPAQVIPQECLVEGYIRDTKCEDSYVKEKLERLCKNTT 256
R + KR GKAT+LA+GKA P+ V+ QE LVE Y+R+ KC++ +K+KL+ LCK+TT
Sbjct: 6 RVEKQKRVAYQGKATVLALGKALPSNVVSQENLVEEYLREIKCDNLSIKDKLQHLCKSTT 65
Query: 257 VKTRYTVMSKEILDNYPELATEGTPTIRQKLEIANPAVVEMAAKASLACINEWGQXSTDL 436
VKTRYTVMS+E L YPELATEG+PTI+Q+LEIAN AVV+MA +ASL CI EWG+ D
Sbjct: 66 VKTRYTVMSRETLHKYPELATEGSPTIKQRLEIANDAVVQMAYEASLVCIKEWGRAVED- 124
Query: 437 ITHIVYVSSSEIRLPGGDLYLANELGLRSDVSRVMLYFLGCYGGVTGLRVAKDIA 601
ITH+VYVSSSE RLPGGDLYL+ +LGL ++V RVMLYFLGCYGG++GLRVAKDIA
Sbjct: 125 ITHLVYVSSSEFRLPGGDLYLSAQLGLSNEVQRVMLYFLGCYGGLSGLRVAKDIA 179
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 553,472,320
Number of Sequences: 1393205
Number of extensions: 13259019
Number of successful extensions: 94902
Number of sequences better than 10.0: 1679
Number of HSP's better than 10.0 without gapping: 64677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 88183
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23711793746
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
