Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019119A_C01 KMC019119A_c01
(619 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC49135.1| SAG12 protein 182 3e-45
ref|NP_568651.1| senescence-specific cysteine protease SAG12; pr... 180 1e-44
ref|NP_563764.1| cysteine proteinase; protein id: At1g06260.1 [A... 178 4e-44
gb|AAL14199.1| cysteine proteinase precursor [Ipomoea batatas] 175 5e-43
gb|AAK27968.1|AF242372_1 cysteine protease [Ipomoea batatas] 175 5e-43
>gb|AAC49135.1| SAG12 protein
Length = 346
Score = 182 bits (462), Expect = 3e-45
Identities = 80/134 (59%), Positives = 99/134 (73%)
Frame = -1
Query: 619 TTERDYPYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDAGGFL 440
TTE DYPYKG+D TCN +K A +I+G++ VP ++E L A AHQPVSVGI+ GGF
Sbjct: 211 TTESDYPYKGEDATCNSKKTNPKATSITGYEDVPVNDEQALMKAVAHQPVSVGIEGGGFD 270
Query: 439 FQLYSGGVFSGFCGKELNHAVTVVGYGREVNGPKYWLVKNSWGADWGEAGYMKILRDTQD 260
FQ YS GVF+G C L+HAVT +GYG NG KYW++KNSWG WGE+GYM+I +D +D
Sbjct: 271 FQFYSSGVFTGECTTYLDHAVTAIGYGESTNGSKYWIIKNSWGTKWGESGYMRIQKDVKD 330
Query: 259 KDGTCGIAMVASYP 218
K G CG+AM ASYP
Sbjct: 331 KQGLCGLAMKASYP 344
>ref|NP_568651.1| senescence-specific cysteine protease SAG12; protein id:
At5g45890.1 [Arabidopsis thaliana]
gi|9758936|dbj|BAB09317.1| senescence-specific cysteine
protease [Arabidopsis thaliana]
gi|13877737|gb|AAK43946.1|AF370131_1 putative
senescence-specific cysteine protease SAG12 [Arabidopsis
thaliana] gi|14532898|gb|AAK64131.1| putative
senescence-specific cysteine protease SAG12 [Arabidopsis
thaliana]
Length = 346
Score = 180 bits (457), Expect = 1e-44
Identities = 79/134 (58%), Positives = 99/134 (72%)
Frame = -1
Query: 619 TTERDYPYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDAGGFL 440
TTE +YPYKG+D TCN +K A +I+G++ VP ++E L A AHQPVSVGI+ GGF
Sbjct: 211 TTESNYPYKGEDATCNSKKTNPKATSITGYEDVPVNDEQALMKAVAHQPVSVGIEGGGFD 270
Query: 439 FQLYSGGVFSGFCGKELNHAVTVVGYGREVNGPKYWLVKNSWGADWGEAGYMKILRDTQD 260
FQ YS GVF+G C L+HAVT +GYG NG KYW++KNSWG WGE+GYM+I +D +D
Sbjct: 271 FQFYSSGVFTGECTTYLDHAVTAIGYGESTNGSKYWIIKNSWGTKWGESGYMRIQKDVKD 330
Query: 259 KDGTCGIAMVASYP 218
K G CG+AM ASYP
Sbjct: 331 KQGLCGLAMKASYP 344
>ref|NP_563764.1| cysteine proteinase; protein id: At1g06260.1 [Arabidopsis thaliana]
gi|25289993|pir||D86198 cysteine proteinase (EC
3.4.22.-) [similarity] - Arabidopsis thaliana
gi|8844131|gb|AAF80223.1|AC025290_12 Contains similarity
to a cysteine endopeptidase 1 from Phaseolus vulgaris
gb|U52970 and is a member of the papain cysteine
protease family PF|00112. [Arabidopsis thaliana]
Length = 343
Score = 178 bits (452), Expect = 4e-44
Identities = 85/135 (62%), Positives = 103/135 (75%)
Frame = -1
Query: 616 TERDYPYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDAGGFLF 437
TE DYPY G +GTC++EK+ + VTI G++KV A NEA L+ AAA QPVSVGIDAGGF+F
Sbjct: 211 TETDYPYTGIEGTCDQEKSKNKVVTIQGYQKV-AQNEASLQIAAAQQPVSVGIDAGGFIF 269
Query: 436 QLYSGGVFSGFCGKELNHAVTVVGYGREVNGPKYWLVKNSWGADWGEAGYMKILRDTQDK 257
QLYS GVF+ +CG LNH VTVVGYG E KYW+VKNSWG WGE GY+++ R +
Sbjct: 270 QLYSSGVFTNYCGTNLNHGVTVVGYGVE-GDQKYWIVKNSWGTGWGEEGYIRMERGVSED 328
Query: 256 DGTCGIAMVASYPVQ 212
G CGIAM+ASYP+Q
Sbjct: 329 TGKCGIAMMASYPLQ 343
>gb|AAL14199.1| cysteine proteinase precursor [Ipomoea batatas]
Length = 341
Score = 175 bits (443), Expect = 5e-43
Identities = 79/134 (58%), Positives = 102/134 (75%)
Frame = -1
Query: 619 TTERDYPYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDAGGFL 440
TTE +YPY+G DG+C K K+++ A ISG++ VPA++E+ L+ A A+QPVSV IDAGG
Sbjct: 206 TTESNYPYQGTDGSCKKSKSSNSAAKISGYEDVPANSESALEKAVANQPVSVAIDAGGSD 265
Query: 439 FQLYSGGVFSGFCGKELNHAVTVVGYGREVNGPKYWLVKNSWGADWGEAGYMKILRDTQD 260
FQ YS GVF+G CG EL+H VT VGYG +G KYWLVKNSWG WGE GY+++ +D +
Sbjct: 266 FQFYSSGVFTGECGTELDHGVTAVGYGIAEDGSKYWLVKNSWGTSWGEKGYIRMQKDIEA 325
Query: 259 KDGTCGIAMVASYP 218
K+G CGIAM +SYP
Sbjct: 326 KEGLCGIAMQSSYP 339
>gb|AAK27968.1|AF242372_1 cysteine protease [Ipomoea batatas]
Length = 339
Score = 175 bits (443), Expect = 5e-43
Identities = 79/134 (58%), Positives = 102/134 (75%)
Frame = -1
Query: 619 TTERDYPYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDAGGFL 440
TTE +YPY+G DG+C K K+++ A ISG++ VPA++E+ L+ A A+QPVSV IDAGG
Sbjct: 204 TTESNYPYQGTDGSCKKSKSSNSAAKISGYEDVPANSESALEKAVANQPVSVAIDAGGSD 263
Query: 439 FQLYSGGVFSGFCGKELNHAVTVVGYGREVNGPKYWLVKNSWGADWGEAGYMKILRDTQD 260
FQ YS GVF+G CG EL+H VT VGYG +G KYWLVKNSWG WGE GY+++ +D +
Sbjct: 264 FQFYSSGVFTGECGTELDHGVTAVGYGIAEDGSKYWLVKNSWGTSWGEKGYIRMQKDIEA 323
Query: 259 KDGTCGIAMVASYP 218
K+G CGIAM +SYP
Sbjct: 324 KEGLCGIAMQSSYP 337
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 544,530,694
Number of Sequences: 1393205
Number of extensions: 12218298
Number of successful extensions: 31242
Number of sequences better than 10.0: 1106
Number of HSP's better than 10.0 without gapping: 28333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29572
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 24733321959
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
