Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019112A_C01 KMC019112A_c01
(774 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_564889.1| expressed protein; protein id: At1g67080.1, sup... 212 4e-54
pir||F96694 hypothetical protein F1O19.13 [imported] - Arabidops... 212 4e-54
dbj|BAB03378.1| unnamed protein product [Oryza sativa (japonica ... 200 2e-50
ref|ZP_00071078.1| hypothetical protein [Trichodesmium erythraeu... 104 2e-21
ref|NP_487431.1| hypothetical protein [Nostoc sp. PCC 7120] gi|2... 100 3e-20
>ref|NP_564889.1| expressed protein; protein id: At1g67080.1, supported by cDNA:
11578. [Arabidopsis thaliana] gi|21536950|gb|AAM61291.1|
unknown [Arabidopsis thaliana]
Length = 220
Score = 212 bits (540), Expect = 4e-54
Identities = 94/136 (69%), Positives = 122/136 (89%)
Frame = -2
Query: 773 GTVAVLPFYTLMVLAPKSELTKKSVESTLPYVVLGVLYAYLLYLSWTPETIRLIFASKHL 594
GT AVLPFYTLMV+APK+E+TKK +ES++PY++LGVLY YLLY+SWTPET++ +F+SK++
Sbjct: 85 GTTAVLPFYTLMVVAPKAEITKKCMESSVPYIILGVLYVYLLYISWTPETLKYMFSSKYM 144
Query: 593 LPELTSIAKMFSNELTLASAWIHLLVVDLFAARHIFQDGLQNQVETRHSVSFCLFFCPIG 414
LPEL+ IAKMFS+E+TLASAWIHLLVVDLFAAR ++ DGL+NQ+ETRHSVS CL FCP+G
Sbjct: 145 LPELSGIAKMFSSEMTLASAWIHLLVVDLFAARQVYNDGLENQIETRHSVSLCLLFCPVG 204
Query: 413 ILTHVITRALIKTTRK 366
I++H +T+A+I K
Sbjct: 205 IVSHFVTKAIINNQYK 220
>pir||F96694 hypothetical protein F1O19.13 [imported] - Arabidopsis thaliana
gi|9755455|gb|AAF98216.1|AC007152_12 Unknown protein
[Arabidopsis thaliana]
Length = 203
Score = 212 bits (540), Expect = 4e-54
Identities = 94/136 (69%), Positives = 122/136 (89%)
Frame = -2
Query: 773 GTVAVLPFYTLMVLAPKSELTKKSVESTLPYVVLGVLYAYLLYLSWTPETIRLIFASKHL 594
GT AVLPFYTLMV+APK+E+TKK +ES++PY++LGVLY YLLY+SWTPET++ +F+SK++
Sbjct: 68 GTTAVLPFYTLMVVAPKAEITKKCMESSVPYIILGVLYVYLLYISWTPETLKYMFSSKYM 127
Query: 593 LPELTSIAKMFSNELTLASAWIHLLVVDLFAARHIFQDGLQNQVETRHSVSFCLFFCPIG 414
LPEL+ IAKMFS+E+TLASAWIHLLVVDLFAAR ++ DGL+NQ+ETRHSVS CL FCP+G
Sbjct: 128 LPELSGIAKMFSSEMTLASAWIHLLVVDLFAARQVYNDGLENQIETRHSVSLCLLFCPVG 187
Query: 413 ILTHVITRALIKTTRK 366
I++H +T+A+I K
Sbjct: 188 IVSHFVTKAIINNQYK 203
>dbj|BAB03378.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 222
Score = 200 bits (508), Expect = 2e-50
Identities = 89/131 (67%), Positives = 115/131 (86%)
Frame = -2
Query: 773 GTVAVLPFYTLMVLAPKSELTKKSVESTLPYVVLGVLYAYLLYLSWTPETIRLIFASKHL 594
GT+AVLPFYTLMV+AP +++TK++V+S+ PYV LG+LYAYLLYLSWTP+T+R +FASK+
Sbjct: 91 GTIAVLPFYTLMVVAPNADVTKRAVDSSAPYVALGILYAYLLYLSWTPDTLRAMFASKYW 150
Query: 593 LPELTSIAKMFSNELTLASAWIHLLVVDLFAARHIFQDGLQNQVETRHSVSFCLFFCPIG 414
LPELT I +MF++E+T+ASAWIHLL VDLFAAR ++ DG++N +ETRHSVS CL FCPIG
Sbjct: 151 LPELTGIVRMFASEMTVASAWIHLLAVDLFAARQVYHDGIKNNIETRHSVSLCLLFCPIG 210
Query: 413 ILTHVITRALI 381
I THV+T+ I
Sbjct: 211 IATHVLTKVHI 221
>ref|ZP_00071078.1| hypothetical protein [Trichodesmium erythraeum IMS101]
Length = 155
Score = 104 bits (259), Expect = 2e-21
Identities = 52/123 (42%), Positives = 78/123 (63%)
Frame = -2
Query: 761 VLPFYTLMVLAPKSELTKKSVESTLPYVVLGVLYAYLLYLSWTPETIRLIFASKHLLPEL 582
VLPF+ L++ P ++T+K +ES +P+++L V+Y YLL S TPE+ A+ P L
Sbjct: 14 VLPFWALIIFLPNWKVTRKIMESFIPFILLVVVYLYLLISSLTPES-----AAALSNPTL 68
Query: 581 TSIAKMFSNELTLASAWIHLLVVDLFAARHIFQDGLQNQVETRHSVSFCLFFCPIGILTH 402
+ IAK F E A+ W+H LV+DLF R I+ +G + V T HS+ CLF P G+L+H
Sbjct: 69 SDIAKFFGEESAAATGWVHFLVMDLFVGRWIYWEGQRTGVWTFHSIILCLFAGPFGLLSH 128
Query: 401 VIT 393
++T
Sbjct: 129 ILT 131
>ref|NP_487431.1| hypothetical protein [Nostoc sp. PCC 7120] gi|25534615|pir||AH2229
hypothetical protein all3391 [imported] - Nostoc sp.
(strain PCC 7120) gi|17132486|dbj|BAB75090.1|
ORF_ID:all3391~hypothetical protein [Nostoc sp. PCC
7120]
Length = 156
Score = 100 bits (248), Expect = 3e-20
Identities = 51/130 (39%), Positives = 79/130 (60%)
Frame = -2
Query: 767 VAVLPFYTLMVLAPKSELTKKSVESTLPYVVLGVLYAYLLYLSWTPETIRLIFASKHLLP 588
V VLPF+ LM+L P ++T++ +ES L ++ L Y YL S TPE + + P
Sbjct: 12 VFVLPFWALMILLPNWKVTRRVMESYLIFLPLAGAYLYLFITSITPENAQALSN-----P 66
Query: 587 ELTSIAKMFSNELTLASAWIHLLVVDLFAARHIFQDGLQNQVETRHSVSFCLFFCPIGIL 408
+L IA+ F++E A+ WIH LV+DLF R I+ +G + + T HS++ CLF P+G+L
Sbjct: 67 QLADIARFFADETAAATGWIHFLVMDLFVGRWIYWEGQKTGIWTIHSLTLCLFAGPLGVL 126
Query: 407 THVITRALIK 378
+H+ T + K
Sbjct: 127 SHIFTYWITK 136
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 623,553,821
Number of Sequences: 1393205
Number of extensions: 12595826
Number of successful extensions: 28207
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 27408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28199
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 38095156112
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
