Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019110A_C01 KMC019110A_c01
(649 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_198322.1| putative protein; protein id: At5g33370.1, supp... 199 2e-50
ref|NP_187079.1| putative GDSL-motif lipase/acylhydrolase; prote... 192 2e-48
ref|NP_194607.1| Proline-rich APG - like protein; protein id: At... 177 8e-44
dbj|BAC56011.1| P0705A05.30 [Oryza sativa (japonica cultivar-gro... 174 1e-42
ref|NP_197344.1| putative protein; protein id: At5g18430.1 [Arab... 170 2e-41
>ref|NP_198322.1| putative protein; protein id: At5g33370.1, supported by cDNA:
34612. [Arabidopsis thaliana] gi|21592967|gb|AAM64916.1|
putative GDSL-motif lipase/acylhydrolase [Arabidopsis
thaliana] gi|28393449|gb|AAO42146.1| unknown protein
[Arabidopsis thaliana] gi|28827340|gb|AAO50514.1|
unknown protein [Arabidopsis thaliana]
Length = 366
Score = 199 bits (507), Expect = 2e-50
Identities = 89/115 (77%), Positives = 101/115 (87%)
Frame = -3
Query: 647 PQLVNMIKGLNQELGADVFIAANAYQMHMDFISNPRAYGFVTSKIACCGQGPYNGIGLCT 468
PQL+ MI LN E+G+ FIAAN QMHMDFIS+P+AYGFVTSK+ACCGQGPYNGIGLCT
Sbjct: 252 PQLIQMITDLNNEVGSSAFIAANTQQMHMDFISDPQAYGFVTSKVACCGQGPYNGIGLCT 311
Query: 467 PASNLCPNRDIYAFWDPFHPSERASRIIVQQILRGTTEYMHPMNLSTIMALDSRT 303
P SNLCPNRD++AFWDPFHPSE+ASRII QQIL G+ EYMHPMNLSTI+ +DS T
Sbjct: 312 PLSNLCPNRDLFAFWDPFHPSEKASRIIAQQILNGSPEYMHPMNLSTILTVDSMT 366
>ref|NP_187079.1| putative GDSL-motif lipase/acylhydrolase; protein id: At3g04290.1,
supported by cDNA: 1323. [Arabidopsis thaliana]
gi|6721157|gb|AAF26785.1|AC016829_9 putative GDSL-motif
lipase/acylhydrolase [Arabidopsis thaliana]
gi|21537340|gb|AAM61681.1| putative GDSL-motif
lipase/acylhydrolase [Arabidopsis thaliana]
Length = 366
Score = 192 bits (489), Expect = 2e-48
Identities = 84/113 (74%), Positives = 101/113 (89%)
Frame = -3
Query: 647 PQLVNMIKGLNQELGADVFIAANAYQMHMDFISNPRAYGFVTSKIACCGQGPYNGIGLCT 468
PQLV++I +N E+G DVF+AANAYQM+MD++SNP +GFVTSK+ACCGQGPYNGIGLCT
Sbjct: 251 PQLVDLIASVNAEIGQDVFVAANAYQMNMDYLSNPEQFGFVTSKVACCGQGPYNGIGLCT 310
Query: 467 PASNLCPNRDIYAFWDPFHPSERASRIIVQQILRGTTEYMHPMNLSTIMALDS 309
P SNLCPNRD+YAFWD FHP+E+A+RIIV QIL G+++YMHPMNLST M LDS
Sbjct: 311 PVSNLCPNRDLYAFWDAFHPTEKANRIIVNQILTGSSKYMHPMNLSTAMLLDS 363
>ref|NP_194607.1| Proline-rich APG - like protein; protein id: At4g28780.1, supported
by cDNA: 324. [Arabidopsis thaliana]
gi|7488228|pir||T04521 proline-rich protein APG homolog
F16A16.110 - Arabidopsis thaliana
gi|4218120|emb|CAA22974.1| Proline-rich APG-like protein
[Arabidopsis thaliana] gi|7269733|emb|CAB81466.1|
Proline-rich APG-like protein [Arabidopsis thaliana]
gi|21592773|gb|AAM64722.1| Proline-rich APG-like protein
[Arabidopsis thaliana] gi|27754717|gb|AAO22802.1|
putative proline-rich APG protein [Arabidopsis thaliana]
gi|28394103|gb|AAO42459.1| putative proline-rich APG
protein [Arabidopsis thaliana]
Length = 367
Score = 177 bits (450), Expect = 8e-44
Identities = 78/114 (68%), Positives = 99/114 (86%)
Frame = -3
Query: 647 PQLVNMIKGLNQELGADVFIAANAYQMHMDFISNPRAYGFVTSKIACCGQGPYNGIGLCT 468
P LV M++GLN+E+G+DVFI ANA+ + DFI+NP+ +GFVTSK+ACCGQG YNG G+CT
Sbjct: 253 PLLVQMLQGLNREIGSDVFIGANAFNTNADFINNPQRFGFVTSKVACCGQGAYNGQGVCT 312
Query: 467 PASNLCPNRDIYAFWDPFHPSERASRIIVQQILRGTTEYMHPMNLSTIMALDSR 306
P S LC +R+ YAFWDPFHP+E+A+R+IVQQI+ G+ EYM+PMNLSTIMALDSR
Sbjct: 313 PLSTLCSDRNAYAFWDPFHPTEKATRLIVQQIMTGSVEYMNPMNLSTIMALDSR 366
>dbj|BAC56011.1| P0705A05.30 [Oryza sativa (japonica cultivar-group)]
Length = 387
Score = 174 bits (440), Expect = 1e-42
Identities = 78/115 (67%), Positives = 94/115 (80%), Gaps = 1/115 (0%)
Frame = -3
Query: 644 QLVNMIKGLNQELGA-DVFIAANAYQMHMDFISNPRAYGFVTSKIACCGQGPYNGIGLCT 468
QLV M + LN ELGA DVF+A NAY+MHMDFIS+P AYGF TSK+ACCGQGPYNG+GLCT
Sbjct: 268 QLVRMTRELNAELGAGDVFVAVNAYRMHMDFISDPAAYGFATSKVACCGQGPYNGVGLCT 327
Query: 467 PASNLCPNRDIYAFWDPFHPSERASRIIVQQILRGTTEYMHPMNLSTIMALDSRT 303
S LCP+R +Y FWD FHP+ERA+RIIV Q + + +YMHP NLSTI+A+D+ T
Sbjct: 328 ALSTLCPDRSLYVFWDNFHPTERANRIIVSQFMSASPDYMHPFNLSTILAMDAAT 382
>ref|NP_197344.1| putative protein; protein id: At5g18430.1 [Arabidopsis thaliana]
Length = 349
Score = 170 bits (430), Expect = 2e-41
Identities = 75/111 (67%), Positives = 94/111 (84%)
Frame = -3
Query: 647 PQLVNMIKGLNQELGADVFIAANAYQMHMDFISNPRAYGFVTSKIACCGQGPYNGIGLCT 468
PQL+ MI LN+++G +VFIAAN QM DF+S PR YGFVTSK+ACCGQGPYNG+GLCT
Sbjct: 239 PQLLQMINELNKKIGRNVFIAANTNQMQEDFLSTPRRYGFVTSKVACCGQGPYNGMGLCT 298
Query: 467 PASNLCPNRDIYAFWDPFHPSERASRIIVQQILRGTTEYMHPMNLSTIMAL 315
SNLCPNR++Y FWD FHP+E+A+R+IV+ IL GTT+YM+PMNLS+ +AL
Sbjct: 299 VLSNLCPNRELYVFWDAFHPTEKANRMIVRHILTGTTKYMNPMNLSSALAL 349
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 566,258,578
Number of Sequences: 1393205
Number of extensions: 12667626
Number of successful extensions: 27751
Number of sequences better than 10.0: 216
Number of HSP's better than 10.0 without gapping: 26730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27619
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27576232529
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
