Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019100A_C01 KMC019100A_c01
(531 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_196631.1| putative protein; protein id: At5g10700.1 [Arab... 185 3e-46
gb|EAA16380.1| Drosophila melanogaster CG14903 gene product [Pla... 102 2e-21
ref|NP_650561.1| CG14903-PA [Drosophila melanogaster] gi|7300169... 98 5e-20
ref|NP_703767.1| hypothetical protein [Plasmodium falciparum 3D7... 94 1e-18
ref|XP_216648.1| similar to CG14903-PA [Drosophila melanogaster]... 92 3e-18
>ref|NP_196631.1| putative protein; protein id: At5g10700.1 [Arabidopsis thaliana]
gi|10129648|emb|CAC08244.1| putative protein
[Arabidopsis thaliana]
Length = 200
Score = 185 bits (469), Expect = 3e-46
Identities = 92/143 (64%), Positives = 110/143 (76%)
Frame = -2
Query: 530 SSSMSQPADSDTLSTPIEAPSKPENADVLVPYVVLRRDLIDTWPLGSVVTQGCHASVSAL 351
S SMSQ + + ++A S + DV+V YVVLRRDLID+WPLGSVVTQGCHASV+A+
Sbjct: 45 SPSMSQ--QTGEIDAVVDASSAEKPDDVVVQYVVLRRDLIDSWPLGSVVTQGCHASVAAI 102
Query: 350 WSSQDDPLTVDYCSPDKIDSMHKVTLEVKGEPPIKNLSEKLTSGGIIHQLWIEQPENFPT 171
WS +DDP+T+ YC P IDSMHKVTLEVKGE + NLSEKL GGI H+LW+EQPEN PT
Sbjct: 103 WSFKDDPVTLQYCDPQHIDSMHKVTLEVKGETQMMNLSEKLKLGGISHKLWMEQPENIPT 162
Query: 170 CLATQTLPHSHVVSPYFKKLKLC 102
C+AT+ P S VS +FKKLKLC
Sbjct: 163 CIATKPYPKSQ-VSSFFKKLKLC 184
>gb|EAA16380.1| Drosophila melanogaster CG14903 gene product [Plasmodium yoelii
yoelii]
Length = 123
Score = 102 bits (255), Expect = 2e-21
Identities = 46/117 (39%), Positives = 76/117 (64%), Gaps = 1/117 (0%)
Frame = -2
Query: 452 DVLVPYVVLRRDLIDT-WPLGSVVTQGCHASVSALWSSQDDPLTVDYCSPDKIDSMHKVT 276
D +V Y+++ ++++D WPLGS++ QGCHA V+ + + DD + +Y SP+KI++MHKV
Sbjct: 4 DPIVQYILVNKEILDKRWPLGSIIAQGCHACVAVIAENMDDAIVKEYLSPEKINAMHKVI 63
Query: 275 LEVKGEPPIKNLSEKLTSGGIIHQLWIEQPENFPTCLATQTLPHSHVVSPYFKKLKL 105
L++ +KNLSE L + +++W EQPEN T +A + + + + YFKK L
Sbjct: 64 LKIDSTDEMKNLSETLDKNNLKYRIWAEQPENILTAIAIKPY-YKNSIKDYFKKYAL 119
>ref|NP_650561.1| CG14903-PA [Drosophila melanogaster] gi|7300169|gb|AAF55335.1|
CG14903-PA [Drosophila melanogaster]
Length = 119
Score = 98.2 bits (243), Expect = 5e-20
Identities = 53/116 (45%), Positives = 71/116 (60%), Gaps = 2/116 (1%)
Frame = -2
Query: 446 LVPYVVLRRDLID--TWPLGSVVTQGCHASVSALWSSQDDPLTVDYCSPDKIDSMHKVTL 273
+V Y+V+R DL +WPLG+V+ Q CHA+ + + + +D TV Y + +D+MHKV L
Sbjct: 4 IVQYIVVRSDLRSALSWPLGAVIAQSCHATAAVIHLNSEDADTVAYLND--LDNMHKVVL 61
Query: 272 EVKGEPPIKNLSEKLTSGGIIHQLWIEQPENFPTCLATQTLPHSHVVSPYFKKLKL 105
E K E + LSEKL I H+LWIEQPEN PTC+A + V Y K LKL
Sbjct: 62 EAKDESALVKLSEKLKENEIKHKLWIEQPENIPTCIALKPYV-KDTVHKYVKHLKL 116
>ref|NP_703767.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23498428|emb|CAD50379.1| hypothetical protein
[Plasmodium falciparum 3D7]
Length = 123
Score = 94.0 bits (232), Expect = 1e-18
Identities = 45/115 (39%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
Frame = -2
Query: 446 LVPYVVLRRDLIDT-WPLGSVVTQGCHASVSALWSSQDDPLTVDYCSPDKIDSMHKVTLE 270
++ Y+++ +++ID WPLGSV+ Q CHA V+ + + DD + DY SP+ I++MHKV L+
Sbjct: 6 IIQYILVNKEIIDKKWPLGSVIAQACHACVAVIAENMDDEIVKDYLSPEHINNMHKVILK 65
Query: 269 VKGEPPIKNLSEKLTSGGIIHQLWIEQPENFPTCLATQTLPHSHVVSPYFKKLKL 105
+ IKNLS L + +++W E PEN T +A + + + V YFKK L
Sbjct: 66 IDDTNEIKNLSSILDKESLKYKIWTEYPENIFTAIALKPY-YKNTVRDYFKKYPL 119
>ref|XP_216648.1| similar to CG14903-PA [Drosophila melanogaster] [Rattus norvegicus]
Length = 140
Score = 92.4 bits (228), Expect = 3e-18
Identities = 50/118 (42%), Positives = 68/118 (57%), Gaps = 3/118 (2%)
Frame = -2
Query: 449 VLVPYVVLRRDLID---TWPLGSVVTQGCHASVSALWSSQDDPLTVDYCSPDKIDSMHKV 279
+LV Y+VLR+DL +WP G++V Q CHA+ +AL +D P T Y ++ M KV
Sbjct: 24 ILVQYLVLRKDLSQAPFSWPTGALVAQACHAATAALHLHRDHPHTAAYLR--ELGRMRKV 81
Query: 278 TLEVKGEPPIKNLSEKLTSGGIIHQLWIEQPENFPTCLATQTLPHSHVVSPYFKKLKL 105
LE E +K L+E L + H LW+EQPEN TC+A + P VS Y KK +L
Sbjct: 82 VLEAADETTLKELAETLQQKNVDHTLWLEQPENIATCIALRPYPKEE-VSQYLKKFRL 138
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 463,234,725
Number of Sequences: 1393205
Number of extensions: 10254092
Number of successful extensions: 29342
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 28431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29325
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17596710992
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
