Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019097A_C01 KMC019097A_c01
(610 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_198322.1| putative protein; protein id: At5g33370.1, supp... 245 3e-64
ref|NP_187079.1| putative GDSL-motif lipase/acylhydrolase; prote... 223 2e-57
ref|NP_194607.1| Proline-rich APG - like protein; protein id: At... 220 1e-56
dbj|BAC56011.1| P0705A05.30 [Oryza sativa (japonica cultivar-gro... 208 4e-53
ref|NP_197344.1| putative protein; protein id: At5g18430.1 [Arab... 203 1e-51
>ref|NP_198322.1| putative protein; protein id: At5g33370.1, supported by cDNA:
34612. [Arabidopsis thaliana] gi|21592967|gb|AAM64916.1|
putative GDSL-motif lipase/acylhydrolase [Arabidopsis
thaliana] gi|28393449|gb|AAO42146.1| unknown protein
[Arabidopsis thaliana] gi|28827340|gb|AAO50514.1|
unknown protein [Arabidopsis thaliana]
Length = 366
Score = 245 bits (626), Expect = 3e-64
Identities = 110/148 (74%), Positives = 127/148 (85%)
Frame = -2
Query: 609 GTGPLGCVPAELALHSRNGECAVELQRAVNLFNPQLVQLINQLNTEIGSHVFISANAFAM 430
GTGP+GCVPAELA SRNGECA ELQRA +LFNPQL+Q+I LN E+GS FI+AN M
Sbjct: 219 GTGPMGCVPAELAQRSRNGECATELQRAASLFNPQLIQMITDLNNEVGSSAFIAANTQQM 278
Query: 429 HLDFVNDPQAYGFVTSKVACCGQGAYNGIGLCTPASNLCPNRDLFAFWDPFHPSERANRL 250
H+DF++DPQAYGFVTSKVACCGQG YNGIGLCTP SNLCPNRDLFAFWDPFHPSE+A+R+
Sbjct: 279 HMDFISDPQAYGFVTSKVACCGQGPYNGIGLCTPLSNLCPNRDLFAFWDPFHPSEKASRI 338
Query: 249 IVDKFMTGSTEYMNPMNLSTIMALDSRT 166
I + + GS EYM+PMNLSTI+ +DS T
Sbjct: 339 IAQQILNGSPEYMHPMNLSTILTVDSMT 366
>ref|NP_187079.1| putative GDSL-motif lipase/acylhydrolase; protein id: At3g04290.1,
supported by cDNA: 1323. [Arabidopsis thaliana]
gi|6721157|gb|AAF26785.1|AC016829_9 putative GDSL-motif
lipase/acylhydrolase [Arabidopsis thaliana]
gi|21537340|gb|AAM61681.1| putative GDSL-motif
lipase/acylhydrolase [Arabidopsis thaliana]
Length = 366
Score = 223 bits (568), Expect = 2e-57
Identities = 100/146 (68%), Positives = 123/146 (83%)
Frame = -2
Query: 609 GTGPLGCVPAELALHSRNGECAVELQRAVNLFNPQLVQLINQLNTEIGSHVFISANAFAM 430
GTG +GC PAELA HSRNGEC LQ A LFNPQLV LI +N EIG VF++ANA+ M
Sbjct: 218 GTGAMGCAPAELAQHSRNGECYGALQTAAALFNPQLVDLIASVNAEIGQDVFVAANAYQM 277
Query: 429 HLDFVNDPQAYGFVTSKVACCGQGAYNGIGLCTPASNLCPNRDLFAFWDPFHPSERANRL 250
++D++++P+ +GFVTSKVACCGQG YNGIGLCTP SNLCPNRDL+AFWD FHP+E+ANR+
Sbjct: 278 NMDYLSNPEQFGFVTSKVACCGQGPYNGIGLCTPVSNLCPNRDLYAFWDAFHPTEKANRI 337
Query: 249 IVDKFMTGSTEYMNPMNLSTIMALDS 172
IV++ +TGS++YM+PMNLST M LDS
Sbjct: 338 IVNQILTGSSKYMHPMNLSTAMLLDS 363
>ref|NP_194607.1| Proline-rich APG - like protein; protein id: At4g28780.1, supported
by cDNA: 324. [Arabidopsis thaliana]
gi|7488228|pir||T04521 proline-rich protein APG homolog
F16A16.110 - Arabidopsis thaliana
gi|4218120|emb|CAA22974.1| Proline-rich APG-like protein
[Arabidopsis thaliana] gi|7269733|emb|CAB81466.1|
Proline-rich APG-like protein [Arabidopsis thaliana]
gi|21592773|gb|AAM64722.1| Proline-rich APG-like protein
[Arabidopsis thaliana] gi|27754717|gb|AAO22802.1|
putative proline-rich APG protein [Arabidopsis thaliana]
gi|28394103|gb|AAO42459.1| putative proline-rich APG
protein [Arabidopsis thaliana]
Length = 367
Score = 220 bits (561), Expect = 1e-56
Identities = 106/148 (71%), Positives = 121/148 (81%), Gaps = 1/148 (0%)
Frame = -2
Query: 609 GTGPLGCVPAELALH-SRNGECAVELQRAVNLFNPQLVQLINQLNTEIGSHVFISANAFA 433
GTGPLGCVPAELA S NGECA E Q+A +FNP LVQ++ LN EIGS VFI ANAF
Sbjct: 219 GTGPLGCVPAELASSGSVNGECAPEAQQAAAIFNPLLVQMLQGLNREIGSDVFIGANAFN 278
Query: 432 MHLDFVNDPQAYGFVTSKVACCGQGAYNGIGLCTPASNLCPNRDLFAFWDPFHPSERANR 253
+ DF+N+PQ +GFVTSKVACCGQGAYNG G+CTP S LC +R+ +AFWDPFHP+E+A R
Sbjct: 279 TNADFINNPQRFGFVTSKVACCGQGAYNGQGVCTPLSTLCSDRNAYAFWDPFHPTEKATR 338
Query: 252 LIVDKFMTGSTEYMNPMNLSTIMALDSR 169
LIV + MTGS EYMNPMNLSTIMALDSR
Sbjct: 339 LIVQQIMTGSVEYMNPMNLSTIMALDSR 366
>dbj|BAC56011.1| P0705A05.30 [Oryza sativa (japonica cultivar-group)]
Length = 387
Score = 208 bits (530), Expect = 4e-53
Identities = 93/149 (62%), Positives = 119/149 (79%), Gaps = 1/149 (0%)
Frame = -2
Query: 609 GTGPLGCVPAELALHSRNGECAVELQRAVNLFNPQLVQLINQLNTEIGS-HVFISANAFA 433
G+GPLGC PAELA S GEC +ELQRA L+N QLV++ +LN E+G+ VF++ NA+
Sbjct: 234 GSGPLGCAPAELATRSATGECDLELQRAAALYNLQLVRMTRELNAELGAGDVFVAVNAYR 293
Query: 432 MHLDFVNDPQAYGFVTSKVACCGQGAYNGIGLCTPASNLCPNRDLFAFWDPFHPSERANR 253
MH+DF++DP AYGF TSKVACCGQG YNG+GLCT S LCP+R L+ FWD FHP+ERANR
Sbjct: 294 MHMDFISDPAAYGFATSKVACCGQGPYNGVGLCTALSTLCPDRSLYVFWDNFHPTERANR 353
Query: 252 LIVDKFMTGSTEYMNPMNLSTIMALDSRT 166
+IV +FM+ S +YM+P NLSTI+A+D+ T
Sbjct: 354 IIVSQFMSASPDYMHPFNLSTILAMDAAT 382
>ref|NP_197344.1| putative protein; protein id: At5g18430.1 [Arabidopsis thaliana]
Length = 349
Score = 203 bits (517), Expect = 1e-51
Identities = 93/145 (64%), Positives = 118/145 (81%), Gaps = 1/145 (0%)
Frame = -2
Query: 609 GTGPLGCVPAELALH-SRNGECAVELQRAVNLFNPQLVQLINQLNTEIGSHVFISANAFA 433
G GPLGC PAELA + NG C+ ELQRA +L++PQL+Q+IN+LN +IG +VFI+AN
Sbjct: 205 GAGPLGCAPAELARSGTSNGRCSAELQRAASLYDPQLLQMINELNKKIGRNVFIAANTNQ 264
Query: 432 MHLDFVNDPQAYGFVTSKVACCGQGAYNGIGLCTPASNLCPNRDLFAFWDPFHPSERANR 253
M DF++ P+ YGFVTSKVACCGQG YNG+GLCT SNLCPNR+L+ FWD FHP+E+ANR
Sbjct: 265 MQEDFLSTPRRYGFVTSKVACCGQGPYNGMGLCTVLSNLCPNRELYVFWDAFHPTEKANR 324
Query: 252 LIVDKFMTGSTEYMNPMNLSTIMAL 178
+IV +TG+T+YMNPMNLS+ +AL
Sbjct: 325 MIVRHILTGTTKYMNPMNLSSALAL 349
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 517,771,475
Number of Sequences: 1393205
Number of extensions: 10792998
Number of successful extensions: 24515
Number of sequences better than 10.0: 232
Number of HSP's better than 10.0 without gapping: 23600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24269
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24283162270
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
