Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019095A_C01 KMC019095A_c01
(652 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK92570.1|AC074354_4 Hypothetical protein [Oryza sativa] 123 2e-27
ref|NP_200927.1| putative protein; protein id: At5g61190.1 [Arab... 78 1e-13
ref|NP_189579.1| hypothetical protein; protein id: At3g29330.1 [... 75 1e-12
dbj|BAB10381.1| emb|CAB71880.1~gene_id:MAF19.19~similar to unkno... 67 2e-10
ref|NP_179981.1| hypothetical protein; protein id: At2g24030.1 [... 47 3e-04
>gb|AAK92570.1|AC074354_4 Hypothetical protein [Oryza sativa]
Length = 421
Score = 123 bits (309), Expect = 2e-27
Identities = 64/145 (44%), Positives = 89/145 (61%), Gaps = 10/145 (6%)
Frame = -3
Query: 626 KPKMKTVQPAYCEVCKTECTSKDVLDQHKLGKRHKKNLEKLRESLKPAQVHPSGSSNPVI 447
K K K VQP CEVCK +C + +VL HK GK+HKKNLE+L++S+ P V P + N V
Sbjct: 269 KKKPKVVQPLTCEVCKIQCDTPEVLRIHKTGKKHKKNLERLQDSITPKPVKPPSTPNTVA 328
Query: 446 -------GPREQNDKGKSISKLKSKRK---IETPEDLEIKKKKVLEGGAAANAVRTCAVC 297
P + I ++K+K TPE+LE+K+++VL+ GAA V+ C VC
Sbjct: 329 LAANMAPDPVTTSVTTSVIPAAQTKKKKSAAATPEELEVKRRRVLDAGAAQGEVKICTVC 388
Query: 296 NVVCNSETVYNYHIAGKMHAAMMKK 222
NVV NS+ VY +HI G+ H AM++K
Sbjct: 389 NVVVNSQKVYEFHIIGQKHKAMVQK 413
>ref|NP_200927.1| putative protein; protein id: At5g61190.1 [Arabidopsis thaliana]
Length = 976
Score = 77.8 bits (190), Expect = 1e-13
Identities = 43/130 (33%), Positives = 63/130 (48%)
Frame = -3
Query: 608 VQPAYCEVCKTECTSKDVLDQHKLGKRHKKNLEKLRESLKPAQVHPSGSSNPVIGPREQN 429
V+P C+VC+ T+ D H GK+H+ NLE + S N ++GP E +
Sbjct: 294 VEPLLCKVCQISFTNNDTYKNHTYGKKHRNNLE----------LQSGKSKNILVGPAEPS 343
Query: 428 DKGKSISKLKSKRKIETPEDLEIKKKKVLEGGAAANAVRTCAVCNVVCNSETVYNYHIAG 249
E E + KK ++E A ANA C +CNVVC S+ V+N H+ G
Sbjct: 344 K--------------EVLEKHNMNKKVMIESRAQANAEFVCLMCNVVCQSQIVFNSHLRG 389
Query: 248 KMHAAMMKKA 219
K HA M+ ++
Sbjct: 390 KKHANMLSQS 399
Score = 42.4 bits (98), Expect = 0.005
Identities = 22/67 (32%), Positives = 37/67 (54%)
Frame = -3
Query: 608 VQPAYCEVCKTECTSKDVLDQHKLGKRHKKNLEKLRESLKPAQVHPSGSSNPVIGPREQN 429
+QP +C+VC+ C SK H GK+H++NLE +S K + + S+ P ++
Sbjct: 679 LQPVWCQVCQISCNSKVAFASHTYGKKHRQNLES--QSAK----NETMSTGPGKLSKDYG 732
Query: 428 DKGKSIS 408
+K K +S
Sbjct: 733 EKTKKVS 739
Score = 37.0 bits (84), Expect = 0.23
Identities = 23/96 (23%), Positives = 43/96 (43%), Gaps = 2/96 (2%)
Frame = -3
Query: 521 KNLEKLRESLKPAQVHPSGSSNPVIGPREQNDKGKSISKLKSKRKIETPEDLEIKKKKVL 342
K + KL S + P+GS++ ++ + K + + L+ +K +L
Sbjct: 182 KGVSKLPVSEQAQPSQPTGSTSNAGDTKDHKTREKHVPR----------GSLQENRKNML 231
Query: 341 E--GGAAANAVRTCAVCNVVCNSETVYNYHIAGKMH 240
+ GA + TC +CNVVC+S + H++ H
Sbjct: 232 QHSSGATGESATTCRICNVVCDSFEKFTAHLSDIRH 267
Score = 34.7 bits (78), Expect = 1.1
Identities = 27/114 (23%), Positives = 48/114 (41%), Gaps = 14/114 (12%)
Frame = -3
Query: 593 CEVCKTECTSKDVLDQHKLGKRHKKNLEKLRESLKPAQVHPSGSSNPVIGPREQNDKGKS 414
C +C C S+ V + H GK+H L + +L A + + +G +EQ + +
Sbjct: 370 CLMCNVVCQSQIVFNSHLRGKKHANMLSQSEATLDQALIVSTKLQEKGVGEKEQPSETVA 429
Query: 413 ISKLKSKRKIETPEDLE-IKKKKVLEGG-------------AAANAVRTCAVCN 294
+L+S++ E + + KK+ E G A+A C +CN
Sbjct: 430 ELQLQSQKAQEKQVPMVLVDSKKLPEKGDEVKGQPKEMTALRNASAKYICRMCN 483
>ref|NP_189579.1| hypothetical protein; protein id: At3g29330.1 [Arabidopsis
thaliana]
Length = 232
Score = 74.7 bits (182), Expect = 1e-12
Identities = 36/79 (45%), Positives = 51/79 (63%)
Frame = -3
Query: 455 PVIGPREQNDKGKSISKLKSKRKIETPEDLEIKKKKVLEGGAAANAVRTCAVCNVVCNSE 276
P+IGP+E SK + + T EDLE K+++V+E G + ++R C +CNVVCNS+
Sbjct: 151 PLIGPQEN----PCTSKARKRGADSTTEDLESKRRRVVECGVSNESIRLCRICNVVCNSD 206
Query: 275 TVYNYHIAGKMHAAMMKKA 219
VYN H+AG+ HAA KA
Sbjct: 207 IVYNDHLAGQKHAAKAAKA 225
>dbj|BAB10381.1| emb|CAB71880.1~gene_id:MAF19.19~similar to unknown protein
[Arabidopsis thaliana]
Length = 996
Score = 67.0 bits (162), Expect = 2e-10
Identities = 38/118 (32%), Positives = 55/118 (46%)
Frame = -3
Query: 608 VQPAYCEVCKTECTSKDVLDQHKLGKRHKKNLEKLRESLKPAQVHPSGSSNPVIGPREQN 429
V+P C+VC+ T+ D H GK+H+ NLE + S N ++GP E +
Sbjct: 294 VEPLLCKVCQISFTNNDTYKNHTYGKKHRNNLE----------LQSGKSKNILVGPAEPS 343
Query: 428 DKGKSISKLKSKRKIETPEDLEIKKKKVLEGGAAANAVRTCAVCNVVCNSETVYNYHI 255
E E + KK ++E A ANA C +CNVVC S+ V+N H+
Sbjct: 344 K--------------EVLEKHNMNKKVMIESRAQANAEFVCLMCNVVCQSQIVFNSHL 387
Score = 42.4 bits (98), Expect = 0.005
Identities = 22/67 (32%), Positives = 37/67 (54%)
Frame = -3
Query: 608 VQPAYCEVCKTECTSKDVLDQHKLGKRHKKNLEKLRESLKPAQVHPSGSSNPVIGPREQN 429
+QP +C+VC+ C SK H GK+H++NLE +S K + + S+ P ++
Sbjct: 699 LQPVWCQVCQISCNSKVAFASHTYGKKHRQNLES--QSAK----NETMSTGPGKLSKDYG 752
Query: 428 DKGKSIS 408
+K K +S
Sbjct: 753 EKTKKVS 759
Score = 39.7 bits (91), Expect = 0.036
Identities = 31/130 (23%), Positives = 62/130 (46%), Gaps = 2/130 (1%)
Frame = -3
Query: 593 CEVCKTECTSKDVLDQHKLGKRHKKNLE-KLRESLKPAQVHPSGSSNPV-IGPREQNDKG 420
C +C C S+ V + H + KL+E + PS + + + ++ +K
Sbjct: 370 CLMCNVVCQSQIVFNSHLRALDQALIVSTKLQEKGVGEKEQPSETVAELQLQSQKAQEKQ 429
Query: 419 KSISKLKSKRKIETPEDLEIKKKKVLEGGAAANAVRTCAVCNVVCNSETVYNYHIAGKMH 240
+ + SK+ E ++++ + K+ + A+A C +CNV C+S V+ H+ G+ H
Sbjct: 430 VPMVLVDSKKLPEKGDEVKGQPKE-MTALRNASAKYICRMCNVGCHSPIVFETHLRGQKH 488
Query: 239 AAMMKKASGL 210
AA + ++ L
Sbjct: 489 AANLNQSKAL 498
Score = 37.7 bits (86), Expect = 0.14
Identities = 26/95 (27%), Positives = 40/95 (41%), Gaps = 19/95 (20%)
Frame = -3
Query: 443 PREQNDKGKSISKLKSKRKIETPEDLEIKKKKV------LEGGAAANAVRT--------- 309
PRE ++ I K + K ET E+KKKK+ + + ++V T
Sbjct: 640 PREASECFDGIVKPVNLSKGETKHSWEVKKKKIEVTAAFVASNGSQSSVSTNPLKEPEGL 699
Query: 308 ----CAVCNVVCNSETVYNYHIAGKMHAAMMKKAS 216
C VC + CNS+ + H GK H ++ S
Sbjct: 700 QPVWCQVCQISCNSKVAFASHTYGKKHRQNLESQS 734
Score = 37.0 bits (84), Expect = 0.23
Identities = 23/96 (23%), Positives = 43/96 (43%), Gaps = 2/96 (2%)
Frame = -3
Query: 521 KNLEKLRESLKPAQVHPSGSSNPVIGPREQNDKGKSISKLKSKRKIETPEDLEIKKKKVL 342
K + KL S + P+GS++ ++ + K + + L+ +K +L
Sbjct: 182 KGVSKLPVSEQAQPSQPTGSTSNAGDTKDHKTREKHVPR----------GSLQENRKNML 231
Query: 341 E--GGAAANAVRTCAVCNVVCNSETVYNYHIAGKMH 240
+ GA + TC +CNVVC+S + H++ H
Sbjct: 232 QHSSGATGESATTCRICNVVCDSFEKFTAHLSDIRH 267
>ref|NP_179981.1| hypothetical protein; protein id: At2g24030.1 [Arabidopsis
thaliana] gi|25412186|pir||G84631 hypothetical protein
At2g24030 [imported] - Arabidopsis thaliana
gi|3738330|gb|AAC63671.1| hypothetical protein
[Arabidopsis thaliana]
Length = 440
Score = 46.6 bits (109), Expect = 3e-04
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 6/131 (4%)
Frame = -3
Query: 596 YCEVCKTECTSKDVLDQHKLGKRHKKNLEKLRESLKPAQVHPSGSSNPVIGPR------E 435
YC++ V+ H+LGK+HK + + E+ + A S +S P
Sbjct: 289 YCQI---------VMRDHELGKKHKAAVTQQNETPEAASTSLSPASVTAPQPEAIRVCEN 339
Query: 434 QNDKGKSISKLKSKRKIETPEDLEIKKKKVLEGGAAANAVRTCAVCNVVCNSETVYNYHI 255
N +G+ + ++ +K E KKK+ + C CN+ NSE H
Sbjct: 340 ANPQGQKVDEIAAKETTGKKTKGEKKKKETV----------WCKTCNIQTNSEQTMRNHT 389
Query: 254 AGKMHAAMMKK 222
GK H A+++K
Sbjct: 390 LGKKHMALLEK 400
Score = 34.7 bits (78), Expect = 1.1
Identities = 18/53 (33%), Positives = 26/53 (48%)
Frame = -3
Query: 650 GKWKKYPKKPKMKTVQPAYCEVCKTECTSKDVLDQHKLGKRHKKNLEKLRESL 492
GK K KK K + +C+ C + S+ + H LGK+H LEK + L
Sbjct: 357 GKKTKGEKKKK----ETVWCKTCNIQTNSEQTMRNHTLGKKHMALLEKQQNKL 405
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 540,574,469
Number of Sequences: 1393205
Number of extensions: 11288095
Number of successful extensions: 37292
Number of sequences better than 10.0: 121
Number of HSP's better than 10.0 without gapping: 35122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37167
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27860523586
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
