Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019093A_C01 KMC019093A_c01
(617 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA11024.1| possible aldehyde decarbonylase [Arabidopsis tha... 311 6e-84
gb|AAC24374.1| CER1 protein [Arabidopsis thaliana] 311 6e-84
gb|AAB87721.1| maize gl1 homolog [Arabidopsis thaliana] 303 9e-82
gb|AAC24373.1| CER1-like protein [Arabidopsis thaliana] 287 9e-77
ref|NP_171721.1| hypothetical protein; protein id: At1g02190.1 [... 287 9e-77
>dbj|BAA11024.1| possible aldehyde decarbonylase [Arabidopsis thaliana]
Length = 567
Score = 311 bits (796), Expect = 6e-84
Identities = 133/190 (70%), Positives = 164/190 (86%)
Frame = +1
Query: 46 MASRPGILTDWPWKPLGSFKYMILAPWVVHSSYSVLVKDKSERDISTSLIFPFLIWRMLH 225
MA++PG+LTDWPW PLGSFKY+++APW VHS+Y + D +RD+ L+FPFL++R+LH
Sbjct: 1 MATKPGVLTDWPWTPLGSFKYIVIAPWAVHSTYRFVTDDPEKRDLGYFLVFPFLLFRILH 60
Query: 226 NQIWITFSRYRTAKGNTRIVDKGIEFDQVDRERDWDDQILFNGLLYYLACYTLPGASRLP 405
NQ+WI+ SRY T+ G RIVDKGI+F+QVDRE +WDDQILFNG+L+Y+ LP A +LP
Sbjct: 61 NQVWISLSRYYTSSGKRRIVDKGIDFNQVDRETNWDDQILFNGVLFYIGINLLPEAKQLP 120
Query: 406 LWRTDGVLIAILLHAGPVEFLYYWLHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAE 585
WRTDGVL+A L+H GPVEFLYYWLH+ALHHH+LYSRYHSHHHSS+VTEPITSVIHPFAE
Sbjct: 121 WWRTDGVLMAALIHTGPVEFLYYWLHKALHHHFLYSRYHSHHHSSIVTEPITSVIHPFAE 180
Query: 586 HISYFLLFAI 615
HI+YF+LFAI
Sbjct: 181 HIAYFILFAI 190
>gb|AAC24374.1| CER1 protein [Arabidopsis thaliana]
Length = 580
Score = 311 bits (796), Expect = 6e-84
Identities = 133/190 (70%), Positives = 164/190 (86%)
Frame = +1
Query: 46 MASRPGILTDWPWKPLGSFKYMILAPWVVHSSYSVLVKDKSERDISTSLIFPFLIWRMLH 225
MA++PG+LTDWPW PLGSFKY+++APW VHS+Y + D +RD+ L+FPFL++R+LH
Sbjct: 1 MATKPGVLTDWPWTPLGSFKYIVIAPWAVHSTYRFVTDDPEKRDLGYFLVFPFLLFRILH 60
Query: 226 NQIWITFSRYRTAKGNTRIVDKGIEFDQVDRERDWDDQILFNGLLYYLACYTLPGASRLP 405
NQ+WI+ SRY T+ G RIVDKGI+F+QVDRE +WDDQILFNG+L+Y+ LP A +LP
Sbjct: 61 NQVWISLSRYYTSSGKRRIVDKGIDFNQVDRETNWDDQILFNGVLFYIGINLLPEAKQLP 120
Query: 406 LWRTDGVLIAILLHAGPVEFLYYWLHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAE 585
WRTDGVL+A L+H GPVEFLYYWLH+ALHHH+LYSRYHSHHHSS+VTEPITSVIHPFAE
Sbjct: 121 WWRTDGVLMAALIHTGPVEFLYYWLHKALHHHFLYSRYHSHHHSSIVTEPITSVIHPFAE 180
Query: 586 HISYFLLFAI 615
HI+YF+LFAI
Sbjct: 181 HIAYFILFAI 190
>gb|AAB87721.1| maize gl1 homolog [Arabidopsis thaliana]
Length = 625
Score = 303 bits (777), Expect = 9e-82
Identities = 129/190 (67%), Positives = 161/190 (83%)
Frame = +1
Query: 46 MASRPGILTDWPWKPLGSFKYMILAPWVVHSSYSVLVKDKSERDISTSLIFPFLIWRMLH 225
MA++PG+LTDWPW PLGSFKY+++APW VHS+Y + D +RD+ L+FPFL++R+LH
Sbjct: 1 MATKPGVLTDWPWTPLGSFKYIVIAPWAVHSTYRFVTDDPEKRDLGYFLVFPFLLFRILH 60
Query: 226 NQIWITFSRYRTAKGNTRIVDKGIEFDQVDRERDWDDQILFNGLLYYLACYTLPGASRLP 405
NQ+WI+ SRY T+ G RIVDKGI+F+QVDRE +WDDQILFNG+L+Y+ L +LP
Sbjct: 61 NQVWISLSRYYTSSGKRRIVDKGIDFNQVDRETNWDDQILFNGVLFYIGINLLAEGKQLP 120
Query: 406 LWRTDGVLIAILLHAGPVEFLYYWLHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAE 585
WRTDGVL+ L+H GPVEFLYYW+H+ALHHH+LYSRYHSHHHSS+VTEPITSVIHPFAE
Sbjct: 121 WWRTDGVLMGALIHTGPVEFLYYWVHKALHHHFLYSRYHSHHHSSIVTEPITSVIHPFAE 180
Query: 586 HISYFLLFAI 615
HI+YF+LFAI
Sbjct: 181 HIAYFILFAI 190
>gb|AAC24373.1| CER1-like protein [Arabidopsis thaliana]
Length = 604
Score = 287 bits (734), Expect = 9e-77
Identities = 129/190 (67%), Positives = 155/190 (80%)
Frame = +1
Query: 46 MASRPGILTDWPWKPLGSFKYMILAPWVVHSSYSVLVKDKSERDISTSLIFPFLIWRMLH 225
MASRPG LT+WPW PLGSFKY+++AP V+ S +S + E+D+S +I ++WR++H
Sbjct: 1 MASRPGALTEWPWSPLGSFKYLLVAPLVMASMHSYVTAVDEEKDLSRLMIVVLMLWRIVH 60
Query: 226 NQIWITFSRYRTAKGNTRIVDKGIEFDQVDRERDWDDQILFNGLLYYLACYTLPGASRLP 405
+QIWI+ SR RTAKG +IVDK IEF+QVDRER WDDQ++FN LL YLA LPGAS LP
Sbjct: 61 SQIWISVSRQRTAKGTNKIVDKPIEFEQVDRERTWDDQVIFNTLLMYLANIKLPGASHLP 120
Query: 406 LWRTDGVLIAILLHAGPVEFLYYWLHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAE 585
WR DG ++ LLHAGPVEFLYYW HRALHHH+LYSRYHSHHHSS+VTEPITSV+HPFAE
Sbjct: 121 PWRLDGAILMALLHAGPVEFLYYWFHRALHHHFLYSRYHSHHHSSIVTEPITSVVHPFAE 180
Query: 586 HISYFLLFAI 615
HI+Y LLFAI
Sbjct: 181 HIAYTLLFAI 190
>ref|NP_171721.1| hypothetical protein; protein id: At1g02190.1 [Arabidopsis
thaliana]
Length = 621
Score = 287 bits (734), Expect = 9e-77
Identities = 129/190 (67%), Positives = 155/190 (80%)
Frame = +1
Query: 46 MASRPGILTDWPWKPLGSFKYMILAPWVVHSSYSVLVKDKSERDISTSLIFPFLIWRMLH 225
MASRPG LT+WPW PLGSFKY+++AP V+ S +S + E+D+S +I ++WR++H
Sbjct: 1 MASRPGALTEWPWSPLGSFKYLLVAPLVMASMHSYVTAVDEEKDLSRLMIVVLMLWRIVH 60
Query: 226 NQIWITFSRYRTAKGNTRIVDKGIEFDQVDRERDWDDQILFNGLLYYLACYTLPGASRLP 405
+QIWI+ SR RTAKG +IVDK IEF+QVDRER WDDQ++FN LL YLA LPGAS LP
Sbjct: 61 SQIWISVSRQRTAKGTNKIVDKPIEFEQVDRERTWDDQVIFNTLLMYLANIKLPGASHLP 120
Query: 406 LWRTDGVLIAILLHAGPVEFLYYWLHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAE 585
WR DG ++ LLHAGPVEFLYYW HRALHHH+LYSRYHSHHHSS+VTEPITSV+HPFAE
Sbjct: 121 PWRLDGAILMALLHAGPVEFLYYWFHRALHHHFLYSRYHSHHHSSIVTEPITSVVHPFAE 180
Query: 586 HISYFLLFAI 615
HI+Y LLFAI
Sbjct: 181 HIAYTLLFAI 190
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 611,255,435
Number of Sequences: 1393205
Number of extensions: 14309855
Number of successful extensions: 40719
Number of sequences better than 10.0: 134
Number of HSP's better than 10.0 without gapping: 36148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39609
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 24733321959
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
