Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019089A_C01 KMC019089A_c01
(609 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_565010.1| expressed protein; protein id: At1g71080.1, sup... 107 1e-22
ref|NP_198621.1| putative protein; protein id: At5g38050.1 [Arab... 98 1e-19
dbj|BAC06871.1| OSJNBa0094H06.13 [Oryza sativa (japonica cultiva... 93 2e-18
gb|EAA00732.1| agCP9812 [Anopheles gambiae str. PEST] 43 0.003
ref|NP_060926.2| ELL-associated factor 2; uncharacterized bone m... 40 0.024
>ref|NP_565010.1| expressed protein; protein id: At1g71080.1, supported by cDNA:
gi_16974549 [Arabidopsis thaliana]
gi|25406100|pir||C96735 unknown protein F23N20.7
[imported] - Arabidopsis thaliana
gi|12323437|gb|AAG51700.1|AC016972_19 unknown protein;
36401-34743 [Arabidopsis thaliana]
gi|16974550|gb|AAL31191.1| At1g71080/F23N20_7
[Arabidopsis thaliana] gi|22137124|gb|AAM91407.1|
At1g71080/F23N20_7 [Arabidopsis thaliana]
Length = 326
Score = 107 bits (267), Expect = 1e-22
Identities = 47/71 (66%), Positives = 61/71 (85%)
Frame = +2
Query: 395 MANKSKEEPKTAPESDRWYNLSLGDSFKNDSSNKYCTLRYEFKPASVDKTKPGLLRKTKE 574
M+N S++EP TAP++D+WY+L LG S K+DSS+K+CTLRYEFKPAS+DK + G + K K+
Sbjct: 1 MSNHSRDEPSTAPKTDQWYDLVLGSSAKDDSSHKFCTLRYEFKPASIDKNRSGSMHKKKD 60
Query: 575 NRVSVEFQNNQ 607
NRVSVEFQNNQ
Sbjct: 61 NRVSVEFQNNQ 71
>ref|NP_198621.1| putative protein; protein id: At5g38050.1 [Arabidopsis thaliana]
gi|8885609|dbj|BAA97539.1|
gb|AAF26010.1~gene_id:F16F17.7~similar to unknown
protein [Arabidopsis thaliana]
Length = 281
Score = 97.8 bits (242), Expect = 1e-19
Identities = 44/68 (64%), Positives = 57/68 (83%), Gaps = 3/68 (4%)
Frame = +2
Query: 413 EEPKTAPESDRWYNLSLGDSFKNDS---SNKYCTLRYEFKPASVDKTKPGLLRKTKENRV 583
EEPK APE +RWYN++LG + N++ S K+CTLRYEFKPAS+D TKPGLL K+K+N+V
Sbjct: 6 EEPKIAPEPNRWYNITLGPTLLNNNHSYSPKFCTLRYEFKPASIDSTKPGLLHKSKDNKV 65
Query: 584 SVEFQNNQ 607
++EFQNNQ
Sbjct: 66 TLEFQNNQ 73
>dbj|BAC06871.1| OSJNBa0094H06.13 [Oryza sativa (japonica cultivar-group)]
Length = 319
Score = 93.2 bits (230), Expect = 2e-18
Identities = 44/72 (61%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
Frame = +2
Query: 395 MANKSKEEPKTAPESDRWYNLSLGDSFKNDSSN-KYCTLRYEFKPASVDKTKPGLLRKTK 571
MA+ + EP TAP+ +RWY L LG S ++ S K+CTLRYEFKPAS+DKT+ G L+KTK
Sbjct: 1 MASGNSGEPSTAPQPNRWYELRLGSSCRDPSPTAKFCTLRYEFKPASIDKTQAGSLQKTK 60
Query: 572 ENRVSVEFQNNQ 607
+NRV+VEF NNQ
Sbjct: 61 DNRVTVEFHNNQ 72
>gb|EAA00732.1| agCP9812 [Anopheles gambiae str. PEST]
Length = 246
Score = 43.1 bits (100), Expect = 0.003
Identities = 21/46 (45%), Positives = 31/46 (66%), Gaps = 1/46 (2%)
Frame = +2
Query: 455 LSLGDSFKNDS-SNKYCTLRYEFKPASVDKTKPGLLRKTKENRVSV 589
L LG +F N SN++ T++Y+FKPASVD KP +L + +V+V
Sbjct: 17 LKLGSTFSNAGPSNQFHTIKYDFKPASVDVNKPAVLEISANKQVTV 62
>ref|NP_060926.2| ELL-associated factor 2; uncharacterized bone marrow protein BM040;
testosterone regulated apoptosis inducer and tumor
suppressor [Homo sapiens]
gi|15559705|gb|AAH14209.1|AAH14209 Unknown (protein for
MGC:20630) [Homo sapiens] gi|23630168|gb|AAL12223.1|
testosterone regulated apoptosis inducer and tumor
suppressor [Homo sapiens] gi|28972540|gb|AAO63811.1|
EAF2 [Homo sapiens]
Length = 260
Score = 40.0 bits (92), Expect = 0.024
Identities = 18/49 (36%), Positives = 29/49 (58%)
Frame = +2
Query: 455 LSLGDSFKNDSSNKYCTLRYEFKPASVDKTKPGLLRKTKENRVSVEFQN 601
L LG+SF+ + T+RY+FKPAS+D + G L + +V++ N
Sbjct: 17 LKLGESFEKQPRCAFHTVRYDFKPASIDTSSEGYLEVGEGEQVTITLPN 65
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 535,853,286
Number of Sequences: 1393205
Number of extensions: 11969121
Number of successful extensions: 43363
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 39268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42797
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24283162270
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
