Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019047A_C01 KMC019047A_c01
(974 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_186871.1| unknown protein; protein id: At3g02220.1 [Arabi... 280 2e-74
dbj|BAC43625.1| unknown protein [Arabidopsis thaliana] gi|289507... 277 2e-73
dbj|BAB92374.1| P0512C01.29 [Oryza sativa (japonica cultivar-gro... 240 3e-62
gb|EAA03432.1| agCP6731 [Anopheles gambiae str. PEST] 116 5e-25
gb|EAA05990.1| agCP13772 [Anopheles gambiae str. PEST] 115 1e-24
>ref|NP_186871.1| unknown protein; protein id: At3g02220.1 [Arabidopsis thaliana]
gi|6041796|gb|AAF02116.1|AC009755_9 unknown protein
[Arabidopsis thaliana]
Length = 227
Score = 280 bits (716), Expect = 2e-74
Identities = 133/218 (61%), Positives = 163/218 (74%), Gaps = 1/218 (0%)
Frame = +2
Query: 23 KTGPPKHQNKVAWKPNAGRKINETEVGGRFRPLSEITGVCPRCRDQIDWKRRYGKYKPLA 202
+ GPPKHQNK AW P AG KINETEVGGRFRPLSEITGVC RCR+QI WKR+YGKYK L
Sbjct: 4 RQGPPKHQNKFAWVPKAGVKINETEVGGRFRPLSEITGVCYRCREQIAWKRKYGKYKTLT 63
Query: 203 EPAKCQRCTKRAVRQAYHNLCSGCAKEHRVCAKCCCSVARIVGRDSEEVEAEQKMLEEAI 382
E KCQ+CTKR VRQAYH LC GCAKE +VCAKCC SV +I+GRD EVEAEQK+L+E I
Sbjct: 64 EATKCQKCTKRNVRQAYHKLCPGCAKEQKVCAKCCQSVDQILGRDIYEVEAEQKLLDETI 123
Query: 383 KNARERERRSLLRAMNKD-KPKSSKDTPTDTKDMKVGQLFPNASLDDYARQKNRVNEDLD 559
KNARER+RR+LLRAMNKD KP S + + + KVG +FP+ SL++YA + RV+ +
Sbjct: 124 KNARERDRRTLLRAMNKDNKPNKSDEEASRSDSSKVGDVFPSTSLEEYANKSGRVSGIIG 183
Query: 560 DGEIHDSKHDDCDGEVCDDEDDNSSENKDSDEDNEDHE 673
G + D HDD G D++D+ + D ED++++E
Sbjct: 184 HGSVPDHAHDDASGPESDEDDNVGDDEHDLREDSDENE 221
>dbj|BAC43625.1| unknown protein [Arabidopsis thaliana] gi|28950775|gb|AAO63311.1|
At3g02220 [Arabidopsis thaliana]
Length = 227
Score = 277 bits (709), Expect = 2e-73
Identities = 131/218 (60%), Positives = 162/218 (74%), Gaps = 1/218 (0%)
Frame = +2
Query: 23 KTGPPKHQNKVAWKPNAGRKINETEVGGRFRPLSEITGVCPRCRDQIDWKRRYGKYKPLA 202
+ GPPKHQNK AW P AG KINETEVGGRFRPLSEITGVC RCR+QI WKR+YGKYK L
Sbjct: 4 RQGPPKHQNKFAWVPKAGVKINETEVGGRFRPLSEITGVCYRCREQIAWKRKYGKYKTLT 63
Query: 203 EPAKCQRCTKRAVRQAYHNLCSGCAKEHRVCAKCCCSVARIVGRDSEEVEAEQKMLEEAI 382
E KCQ+CTKR VRQAYH LC GCAKE +VCAKCC SV +I+GRD EVEAEQK+ +E I
Sbjct: 64 EATKCQKCTKRNVRQAYHKLCPGCAKEQKVCAKCCQSVDQILGRDIYEVEAEQKLFDETI 123
Query: 383 KNARERERRSLLRAMNKD-KPKSSKDTPTDTKDMKVGQLFPNASLDDYARQKNRVNEDLD 559
+NARER+RR+LLRAMNKD KP S + + + KVG +FP+ SL++YA + RV+ +
Sbjct: 124 RNARERDRRTLLRAMNKDNKPNKSDEEASRSDSSKVGDVFPSTSLEEYANKSGRVSGIIG 183
Query: 560 DGEIHDSKHDDCDGEVCDDEDDNSSENKDSDEDNEDHE 673
G + D HDD G D++D+ + D ED++++E
Sbjct: 184 HGSVPDHAHDDASGPESDEDDNVGDDEHDLREDSDENE 221
>dbj|BAB92374.1| P0512C01.29 [Oryza sativa (japonica cultivar-group)]
Length = 260
Score = 240 bits (612), Expect = 3e-62
Identities = 114/184 (61%), Positives = 136/184 (72%)
Frame = +2
Query: 38 KHQNKVAWKPNAGRKINETEVGGRFRPLSEITGVCPRCRDQIDWKRRYGKYKPLAEPAKC 217
+HQN+ AWKPN G+KINETE GGRFRPLSEITGVC RC+DQIDWKRRYGKYKP+ EPAKC
Sbjct: 78 RHQNRYAWKPNLGQKINETEPGGRFRPLSEITGVCQRCKDQIDWKRRYGKYKPIVEPAKC 137
Query: 218 QRCTKRAVRQAYHNLCSGCAKEHRVCAKCCCSVARIVGRDSEEVEAEQKMLEEAIKNARE 397
Q+C KR VRQAYHN+C+ C+K+ +CAKCC V +VGRD E E+E+K LEEAI+ ARE
Sbjct: 138 QKCGKRNVRQAYHNVCTACSKDLGICAKCCTCVKALVGRDLSEQESERKELEEAIRGARE 197
Query: 398 RERRSLLRAMNKDKPKSSKDTPTDTKDMKVGQLFPNASLDDYARQKNRVNEDLDDGEIHD 577
RERR+LLR MNK +S P + G +FP ASLD+YA Q R +D D+ E D
Sbjct: 198 RERRTLLRLMNKGGGESGPSVPKIADRSREGDIFPAASLDEYAEQA-RQQDDSDEEEARD 256
Query: 578 SKHD 589
D
Sbjct: 257 FVED 260
>gb|EAA03432.1| agCP6731 [Anopheles gambiae str. PEST]
Length = 260
Score = 116 bits (291), Expect = 5e-25
Identities = 78/229 (34%), Positives = 113/229 (49%), Gaps = 9/229 (3%)
Frame = +2
Query: 20 KKTGPPKHQNKVAWKPNAGRKINETEVGGRFRPLSEITGVCPRCRDQIDWKRRYGKYKPL 199
++T KHQN A+K N K T + L+ + VC C+ IDWK RY KYKPL
Sbjct: 32 RRTRAQKHQNTYAFKNNLHDK--HTPLIKLITNLN-VCEVCEHCKSIIDWKIRYRKYKPL 88
Query: 200 AEPAKCQRCTKRAVRQAYHNLCSGCAKEHRVCAKCCCSVARIVGRDSEEVEAEQKML--- 370
++P C +C +R V++AYH +C CA R CAKC S E E EQ L
Sbjct: 89 SQPKSCSKCGERKVKRAYHVICRDCALASRCCAKCLKSADEASIIPPEPTEQEQIKLKAE 148
Query: 371 -EEAIKNARERERRSLLRAMNKDKPKSSKDTPTDTKDMKVG-----QLFPNASLDDYARQ 532
++ IK+ ER+RR+ LR MN+ + K K+ D +D Q PN + AR
Sbjct: 149 MDQLIKSLPERKRRTFLRYMNRGQKKKQKNGAADLEDSDEDENDGRQRKPNGV--EMART 206
Query: 533 KNRVNEDLDDGEIHDSKHDDCDGEVCDDEDDNSSENKDSDEDNEDHEAD 679
+ + E + ++ K DG+ DD+ D+ + DED ED+ +
Sbjct: 207 REELLEKFEQLKLATGK----DGQEGDDDYDDLDDFSSDDEDYEDYSEE 251
>gb|EAA05990.1| agCP13772 [Anopheles gambiae str. PEST]
Length = 260
Score = 115 bits (288), Expect = 1e-24
Identities = 77/229 (33%), Positives = 113/229 (48%), Gaps = 9/229 (3%)
Frame = +2
Query: 20 KKTGPPKHQNKVAWKPNAGRKINETEVGGRFRPLSEITGVCPRCRDQIDWKRRYGKYKPL 199
++T KHQN A+K N K T + L+ + VC C+ IDWK +Y KYKPL
Sbjct: 32 RRTRAQKHQNTYAFKNNLHDK--HTPLIKLITNLN-VCEVCEHCKSIIDWKIKYRKYKPL 88
Query: 200 AEPAKCQRCTKRAVRQAYHNLCSGCAKEHRVCAKCCCSVARIVGRDSEEVEAEQKML--- 370
++P C +C +R V++AYH +C CA R CAKC S E E EQ L
Sbjct: 89 SQPKSCSKCGERKVKRAYHVICRDCALASRCCAKCLKSADEASIIPPEPTEQEQIKLKAE 148
Query: 371 -EEAIKNARERERRSLLRAMNKDKPKSSKDTPTDTKDMKVG-----QLFPNASLDDYARQ 532
++ IK+ ER+RR+ LR MN+ + K K+ D +D Q PN + AR
Sbjct: 149 MDQLIKSLPERKRRTFLRYMNRGQKKKQKNGAADLEDSDEDENDGRQRKPNGV--EMART 206
Query: 533 KNRVNEDLDDGEIHDSKHDDCDGEVCDDEDDNSSENKDSDEDNEDHEAD 679
+ + E + ++ K DG+ DD+ D+ + DED ED+ +
Sbjct: 207 REELLEKFEQLKLATGK----DGQEGDDDYDDLDDFSSDDEDYEDYSEE 251
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 854,237,265
Number of Sequences: 1393205
Number of extensions: 19892242
Number of successful extensions: 154723
Number of sequences better than 10.0: 1990
Number of HSP's better than 10.0 without gapping: 78137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 114409
length of database: 448,689,247
effective HSP length: 123
effective length of database: 277,325,032
effective search space used: 55742331432
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
