Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019046A_C01 KMC019046A_c01
(619 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN65008.1| hypothetical protein [Oryza sativa (japonica cult... 84 2e-15
gb|AAO64190.1| unknown protein [Arabidopsis thaliana] 78 1e-13
ref|NP_176998.1| unknown protein; protein id: At1g68310.1 [Arabi... 78 1e-13
gb|EAA04683.1| agCP3271 [Anopheles gambiae str. PEST] 71 1e-11
ref|NP_611509.1| CG30152-PA [Drosophila melanogaster] gi|2045536... 68 1e-10
>gb|AAN65008.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 154
Score = 83.6 bits (205), Expect = 2e-15
Identities = 41/59 (69%), Positives = 50/59 (84%)
Frame = -2
Query: 552 LYLIYHSNSSLQVDIQVSPGSHADEESVNKQLNDKERIAAALENPNLRQLVDECLSSNE 376
L L+ + ++DI+V+PGS A+EESVNKQLNDKER+AAALENPNLRQLVDECL SN+
Sbjct: 92 LKLMQNFPPHFKIDIKVAPGSLANEESVNKQLNDKERVAAALENPNLRQLVDECLCSND 150
>gb|AAO64190.1| unknown protein [Arabidopsis thaliana]
Length = 157
Score = 77.8 bits (190), Expect = 1e-13
Identities = 35/51 (68%), Positives = 45/51 (87%)
Frame = -2
Query: 528 SSLQVDIQVSPGSHADEESVNKQLNDKERIAAALENPNLRQLVDECLSSNE 376
S ++DI+V+PGSHA E+++NKQLNDKER+AAALENPNL ++VDECL S E
Sbjct: 107 SRYKIDIRVAPGSHATEDALNKQLNDKERVAAALENPNLVEMVDECLPSEE 157
>ref|NP_176998.1| unknown protein; protein id: At1g68310.1 [Arabidopsis thaliana]
gi|20455357|sp|Q9C9G6|U195_ARATH Hypothetical protein
At1g68310 gi|25404726|pir||G96706 unknown protein,
44053-42626 [imported] - Arabidopsis thaliana
gi|12325332|gb|AAG52613.1|AC016447_22 unknown protein;
44053-42626 [Arabidopsis thaliana]
Length = 159
Score = 77.8 bits (190), Expect = 1e-13
Identities = 35/51 (68%), Positives = 45/51 (87%)
Frame = -2
Query: 528 SSLQVDIQVSPGSHADEESVNKQLNDKERIAAALENPNLRQLVDECLSSNE 376
S ++DI+V+PGSHA E+++NKQLNDKER+AAALENPNL ++VDECL S E
Sbjct: 109 SRYKIDIRVAPGSHATEDALNKQLNDKERVAAALENPNLVEMVDECLPSEE 159
>gb|EAA04683.1| agCP3271 [Anopheles gambiae str. PEST]
Length = 192
Score = 71.2 bits (173), Expect = 1e-11
Identities = 30/50 (60%), Positives = 41/50 (82%)
Frame = -2
Query: 525 SLQVDIQVSPGSHADEESVNKQLNDKERIAAALENPNLRQLVDECLSSNE 376
SL++DI + G+HA E+ +NKQ+NDKERIAAA+ENPNLRQLV+ C+ +
Sbjct: 143 SLKLDIYIKKGAHATEDEINKQINDKERIAAAMENPNLRQLVENCIKDED 192
>ref|NP_611509.1| CG30152-PA [Drosophila melanogaster]
gi|20455369|sp|Q9V968|U196_DROME Hypothetical protein
CG10404 gi|7302339|gb|AAF57428.1| CG30152-PA [Drosophila
melanogaster] gi|21428642|gb|AAM49981.1| LP10549p
[Drosophila melanogaster]
Length = 218
Score = 67.8 bits (164), Expect = 1e-10
Identities = 28/50 (56%), Positives = 39/50 (78%)
Frame = -2
Query: 525 SLQVDIQVSPGSHADEESVNKQLNDKERIAAALENPNLRQLVDECLSSNE 376
++++DI + G+H EE +NKQ+NDKERIAAA+ENPNLR LV+ C+ E
Sbjct: 169 NIKLDIYIKKGAHQTEEEINKQINDKERIAAAMENPNLRDLVENCIKDEE 218
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 520,622,912
Number of Sequences: 1393205
Number of extensions: 10798648
Number of successful extensions: 23576
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 22912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23566
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 24733321959
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
