Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC018994A_C01 KMC018994A_c01
(613 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_195902.1| meiosis specific - like protein; protein id: At... 249 3e-65
gb|AAO17008.1| Hypothetical protein [Oryza sativa (japonica cult... 185 4e-46
gb|ZP_00056820.1| hypothetical protein [Thermobifida fusca] 82 6e-15
pir||T46707 proteophosphoglycan, membrane-associated [imported] ... 73 3e-12
ref|NP_176464.1| hypothetical protein; protein id: At1g62763.1 [... 71 1e-11
>ref|NP_195902.1| meiosis specific - like protein; protein id: At5g02820.1, supported
by cDNA: gi_15488538 [Arabidopsis thaliana]
gi|11358505|pir||T48303 meiosis specific-like protein -
Arabidopsis thaliana gi|7413557|emb|CAB86036.1| meiosis
specific-like protein [Arabidopsis thaliana]
gi|12331186|emb|CAC24689.1| topoisomerase 6 subunit A
[Arabidopsis thaliana]
gi|15488539|gb|AAL01152.1|AF323679_1 putative
topoisomerase VI subunit A [Arabidopsis thaliana]
Length = 427
Score = 249 bits (635), Expect = 3e-65
Identities = 131/196 (66%), Positives = 158/196 (79%), Gaps = 5/196 (2%)
Frame = +2
Query: 41 MADGKKRRRT-DPTENSLPFKNKLKPDSVILETLKEFSTSS----SASSSSSSAADKTLT 205
MAD KKR+R+ D LPFK+ L+ D VI E LK + +SS + + +SS++ K LT
Sbjct: 1 MADKKKRKRSKDDEAEELPFKSILESDDVITELLKSYISSSIKAAAGAGGASSSSSKPLT 60
Query: 206 LQDLSLPFRCREVADLSLSSVQSNIESLARKIAHSILTGNGFAFDVPSRSSANQLYVPEL 385
L DLSL CREVADLSLSSVQ+ IE++ +IA SIL G+GF+F VPSR+++NQLYVPEL
Sbjct: 61 LADLSLSSSCREVADLSLSSVQTEIETVIVQIARSILAGDGFSFSVPSRAASNQLYVPEL 120
Query: 386 DRIVLKDKSSLRPFGNISTVRKSTITARILELIHQLCLKGIHVTKRDLFYTDVKLFKDQT 565
DRIVLKDKS+LRPF ++S+VRK+TIT RIL LIHQLCL+ IHVTKRDLFYTDVKLF+DQT
Sbjct: 121 DRIVLKDKSTLRPFASVSSVRKTTITTRILALIHQLCLRNIHVTKRDLFYTDVKLFQDQT 180
Query: 566 QSDTVLDDVSCMLGCT 613
QSD VLDDVSCMLGCT
Sbjct: 181 QSDAVLDDVSCMLGCT 196
>gb|AAO17008.1| Hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 830
Score = 185 bits (470), Expect = 4e-46
Identities = 102/192 (53%), Positives = 131/192 (68%), Gaps = 5/192 (2%)
Frame = +2
Query: 53 KKRRRTDPTENSLPFKNKLKPDSVILETLKEFSTSSS-----ASSSSSSAADKTLTLQDL 217
KK R + + ++KL+PD+ IL TL+ +++ S SSSSSS+A K L +D
Sbjct: 409 KKPRVSTAASYAESLRSKLRPDASILATLRSLASACSKSKPAGSSSSSSSASKALAAEDD 468
Query: 218 SLPFRCREVADLSLSSVQSNIESLARKIAHSILTGNGFAFDVPSRSSANQLYVPELDRIV 397
VAD +SV S I L A SIL+G GF+F VPSR+++NQ+Y+P+LDRIV
Sbjct: 469 PAASYI-VVADQDSASVTSRINRLVLAAARSILSGRGFSFAVPSRAASNQVYLPDLDRIV 527
Query: 398 LKDKSSLRPFGNISTVRKSTITARILELIHQLCLKGIHVTKRDLFYTDVKLFKDQTQSDT 577
L + S RPF N++T RK+TITAR+L L+H + +GIHVTKRDLFYTDVKLF DQ QSD
Sbjct: 528 LVRRESARPFANVATARKATITARVLSLVHAVLRRGIHVTKRDLFYTDVKLFGDQAQSDA 587
Query: 578 VLDDVSCMLGCT 613
VLDDVSCMLGCT
Sbjct: 588 VLDDVSCMLGCT 599
Score = 44.3 bits (103), Expect = 0.001
Identities = 46/152 (30%), Positives = 67/152 (43%), Gaps = 30/152 (19%)
Frame = +3
Query: 210 KTSPSPSAAAR------WRTSPSPPCNPTSSLSPARSRTPSSPVTASPSMSPP------- 350
+T P+ +AA R + TS PP P + P R P +P + S MS
Sbjct: 340 RTLPNHAAATRAQTLVEFSTSAPPPSPPLKAPKPKSPRFPHAPASKSLDMSEKKRRGGAG 399
Query: 351 ---APPPTSSMSLNSTASS------SRINPPSARLVT--SPPSANPPSPPASSSSSTSSA 497
A S STA+S S++ P ++ L T S SA S PA SSSS+SSA
Sbjct: 400 AGAASGSASKKPRVSTAASYAESLRSKLRPDASILATLRSLASACSKSKPAGSSSSSSSA 459
Query: 498 SRGFMSPS------VTSSTQMLSSSRTRLNRI 575
S+ + + + Q +S +R+NR+
Sbjct: 460 SKALAAEDDPAASYIVVADQDSASVTSRINRL 491
>gb|ZP_00056820.1| hypothetical protein [Thermobifida fusca]
Length = 754
Score = 82.0 bits (201), Expect = 6e-15
Identities = 65/187 (34%), Positives = 91/187 (47%), Gaps = 12/187 (6%)
Frame = +3
Query: 30 RKHPWPTAKSAAVPTQPRTLFPSRTS*NQTQ*SWKP*RSSQPPHQLLHPPLPPQTKP*PS 209
R+ P P SAA P P PS +S +W P S P P P P PS
Sbjct: 93 RESPPPPKSSAASP--PPNSPPSTSSAPAPATTWPPHSPSTPDPATSSSPSAPPEPPSPS 150
Query: 210 KTSPSPSAAARWRTSPSPP--CNPTSSLS---------PARSRTPSSPVTASPSMSPPAP 356
+P P+ A SP+PP +P+S+ S P RS +PS T SPS PPAP
Sbjct: 151 PKNPPPTPPAPSPDSPTPPDASSPSSAPSTQPASSPPEPLRSASPSKNSTNSPSPHPPAP 210
Query: 357 PPTSSMSLNST-ASSSRINPPSARLVTSPPSANPPSPPASSSSSTSSASRGFMSPSVTSS 533
+SS ++ A + PP+A + P++ PP+ PA SS + S+AS ++PS SS
Sbjct: 211 AASSSCPTSTANAPPTCPTPPAASTASPEPTSPPPTWPAPSSKACSAAS---LTPSTPSS 267
Query: 534 TQMLSSS 554
T++ S+
Sbjct: 268 TKVSPST 274
Score = 67.8 bits (164), Expect = 1e-10
Identities = 60/175 (34%), Positives = 78/175 (44%), Gaps = 20/175 (11%)
Frame = +3
Query: 36 HPWPTAKSAAVPTQPRTLFPSRTS*NQTQ*SWKP*RSSQPPHQLLHPPLPPQTKP*PSK- 212
+P PTA A P P T P T T S P ++ P + PP P P+
Sbjct: 56 NPSPTA---ATPPAPATTTPPPTPTGPTC-SPSPSAANSAPRESPPPPKSSAASPPPNSP 111
Query: 213 --TSPSPSAAARWRT-SPSPPCNPTSSLSPARSRTPSSPVTASPSMSPPAPPPTSSMSLN 383
TS +P+ A W SPS P +P +S SP+ P SP SP PP PP S S
Sbjct: 112 PSTSSAPAPATTWPPHSPSTP-DPATSSSPSAPPEPPSP---SPKNPPPTPPAPSPDSPT 167
Query: 384 STASSSRINPPSARLVTSP----------------PSANPPSPPASSSSSTSSAS 500
+SS + PS + +SP PS +PP+P ASSS TS+A+
Sbjct: 168 PPDASSPSSAPSTQPASSPPEPLRSASPSKNSTNSPSPHPPAPAASSSCPTSTAN 222
Score = 62.8 bits (151), Expect = 3e-09
Identities = 54/171 (31%), Positives = 78/171 (45%), Gaps = 13/171 (7%)
Frame = +3
Query: 45 PTAKSAAVP-TQPRTLFPSRTS*NQTQ*SWKP*RSSQPPHQ---LLHPPLPPQTKP*PSK 212
P+ SA P T P T P + + P +PP+ PP P T P P+
Sbjct: 19 PSPNSAGSPNTNPTT--PPEPKASSCPTTGSPNALPKPPNPSPTAATPPAPATTTPPPTP 76
Query: 213 T----SPSPSAA-ARWRTSPSPP----CNPTSSLSPARSRTPSSPVTASPSMSPPAPPPT 365
T SPSPSAA + R SP PP +P + P+ S P +P T P SP P P
Sbjct: 77 TGPTCSPSPSAANSAPRESPPPPKSSAASPPPNSPPSTSSAP-APATTWPPHSPSTPDPA 135
Query: 366 SSMSLNSTASSSRINPPSARLVTSPPSANPPSPPASSSSSTSSASRGFMSP 518
+S S ++ +P + PS + P+PP +SS S++ +++ SP
Sbjct: 136 TSSSPSAPPEPPSPSPKNPPPTPPAPSPDSPTPPDASSPSSAPSTQPASSP 186
Score = 62.4 bits (150), Expect = 5e-09
Identities = 57/199 (28%), Positives = 83/199 (41%), Gaps = 22/199 (11%)
Frame = +3
Query: 9 SFPAHTHRKHPWPTAKSAAVPTQPRTLFPSRTS*NQTQ*SWKP*RSSQPPHQLLHPPLPP 188
++P H+ T+ S + P +P PS + N P S P P P
Sbjct: 123 TWPPHSPSTPDPATSSSPSAPPEP----PSPSPKNPPPTPPAPSPDSPTPPDASSPSSAP 178
Query: 189 QTKP*PSKTSP----SPSAAARWRTSPSPPCNPTSSLSP-----ARSRTPSSPVTASPSM 341
T+P S P SPS + SP PP SS P A P+ P ++ S
Sbjct: 179 STQPASSPPEPLRSASPSKNSTNSPSPHPPAPAASSSCPTSTANAPPTCPTPPAASTASP 238
Query: 342 SPPAPPPT---------SSMSLN-STASSSRINP---PSARLVTSPPSANPPSPPASSSS 482
P +PPPT S+ SL ST SS++++P S+ P + PSPP SS++
Sbjct: 239 EPTSPPPTWPAPSSKACSAASLTPSTPSSTKVSPSTVSSSSAAAPAPPQSAPSPPKSSAA 298
Query: 483 STSSASRGFMSPSVTSSTQ 539
+ S + SP+ + Q
Sbjct: 299 PSPSQPKANTSPTAPPAKQ 317
Score = 57.0 bits (136), Expect = 2e-07
Identities = 40/114 (35%), Positives = 55/114 (48%), Gaps = 16/114 (14%)
Frame = +3
Query: 204 PSKTSPSPSAAARWRTSPSPPCNPTSSLSPA---------------RSRTPSSPVTASPS 338
PS SPSP++A T+P+ P P +S P + TP +P T +P
Sbjct: 14 PSPASPSPNSAGSPNTNPTTPPEPKASSCPTTGSPNALPKPPNPSPTAATPPAPATTTP- 72
Query: 339 MSPPAPP-PTSSMSLNSTASSSRINPPSARLVTSPPSANPPSPPASSSSSTSSA 497
PP P PT S S ++ S+ R +PP PP ++ SPP +S STSSA
Sbjct: 73 --PPTPTGPTCSPSPSAANSAPRESPP-------PPKSSAASPPPNSPPSTSSA 117
Score = 54.7 bits (130), Expect = 9e-07
Identities = 48/141 (34%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Frame = +3
Query: 177 PLPPQTKP*PSKTSPSPSAAARWRTSPSPPCNPTSSLSP-----ARSRTPSSPVTASPSM 341
P PP PS T+ +P A A T P P PT S SP A +P P +++ S
Sbjct: 52 PKPPN----PSPTAATPPAPAT-TTPPPTPTGPTCSPSPSAANSAPRESPPPPKSSAASP 106
Query: 342 SPPAPPPTSSMSLNSTA----SSSRINPPSARLVTSPPSA-------NPPSPPASSSSST 488
P +PP TSS +T S S +P ++ ++PP PP+PPA S S
Sbjct: 107 PPNSPPSTSSAPAPATTWPPHSPSTPDPATSSSPSAPPEPPSPSPKNPPPTPPAPSPDSP 166
Query: 489 SSASRGFMSPSVTSSTQMLSS 551
+ SPS STQ SS
Sbjct: 167 TPPDAS--SPSSAPSTQPASS 185
Score = 53.5 bits (127), Expect = 2e-06
Identities = 56/190 (29%), Positives = 76/190 (39%), Gaps = 24/190 (12%)
Frame = +3
Query: 39 PWPTAKSAAVPTQPRTLFPSRTS*NQTQ*SW-KP*RSSQPPHQLL-----HPPLPPQTKP 200
P P A S PT P PS Q S +P RS+ P HPP P +
Sbjct: 156 PTPPAPSPDSPTPPDASSPSSAPSTQPASSPPEPLRSASPSKNSTNSPSPHPPAPAASSS 215
Query: 201 *PSKTS------PSPSAAARWRTSP-SPPCN---PTSSLSPARSRTPSSP--------VT 326
P+ T+ P+P AA+ P SPP P+S A S TPS+P
Sbjct: 216 CPTSTANAPPTCPTPPAASTASPEPTSPPPTWPAPSSKACSAASLTPSTPSSTKVSPSTV 275
Query: 327 ASPSMSPPAPPPTSSMSLNSTASSSRINPPSARLVTSPPSANPPSPPASSSSSTSSASRG 506
+S S + PAPP ++ S+A+ S PS + P+A P P S ++ +
Sbjct: 276 SSSSAAAPAPPQSAPSPPKSSAAPS----PSQPKANTSPTAPPAKQPGHSPANPPHPNGK 331
Query: 507 FMSPSVTSST 536
PS T
Sbjct: 332 TPEPSSAKPT 341
Score = 51.2 bits (121), Expect = 1e-05
Identities = 46/150 (30%), Positives = 58/150 (38%), Gaps = 2/150 (1%)
Frame = +3
Query: 45 PTAKSAAVPTQPRTLFPSRTS*NQTQ*--SWKP*RSSQPPHQLLHPPLPPQTKP*PSKTS 218
PT+ + A PT P S S T +W S L P P TK PS S
Sbjct: 217 PTSTANAPPTCPTPPAASTASPEPTSPPPTWPAPSSKACSAASLTPSTPSSTKVSPSTVS 276
Query: 219 PSPSAAARWRTSPSPPCNPTSSLSPARSRTPSSPVTASPSMSPPAPPPTSSMSLNSTASS 398
S +AA P P S+ SP +S SP + SP APP
Sbjct: 277 SSSAAA---------PAPPQSAPSPPKSSAAPSPSQPKANTSPTAPPA-------KQPGH 320
Query: 399 SRINPPSARLVTSPPSANPPSPPASSSSST 488
S NPP T PS+ P+PP +++T
Sbjct: 321 SPANPPHPNGKTPEPSSAKPTPPRRYANAT 350
Score = 42.7 bits (99), Expect = 0.004
Identities = 39/120 (32%), Positives = 52/120 (42%), Gaps = 13/120 (10%)
Frame = +3
Query: 39 PWPTAKSAAVP--TQPRTLFPSRTS*NQTQ*SWKP*RSSQPPHQLLHP----------PL 182
P P A S A P T P +P+ +S + S P S P + P P
Sbjct: 228 PTPPAASTASPEPTSPPPTWPAPSSKACSAASLTP---STPSSTKVSPSTVSSSSAAAPA 284
Query: 183 PPQTKP*PSKTSPSPSAAA-RWRTSPSPPCNPTSSLSPARSRTPSSPVTASPSMSPPAPP 359
PPQ+ P P K+S +PS + + TSP+ P SPA P+ T PS + P PP
Sbjct: 285 PPQSAPSPPKSSAAPSPSQPKANTSPTAPPAKQPGHSPANPPHPNGK-TPEPSSAKPTPP 343
Score = 40.8 bits (94), Expect = 0.014
Identities = 26/93 (27%), Positives = 41/93 (43%), Gaps = 1/93 (1%)
Frame = +3
Query: 258 SPPCNPTSSLSPARSRTPSSPVTASPSMSPPAPPPTSSMSLNSTASSSRI-NPPSARLVT 434
+PP S +PS SP+ +P PP + S +T S + + PP+
Sbjct: 2 APPHGAKPSAQSPSPASPSPNSAGSPNTNPTTPPEPKASSCPTTGSPNALPKPPN----P 57
Query: 435 SPPSANPPSPPASSSSSTSSASRGFMSPSVTSS 533
SP +A PP+P ++ T + SPS +S
Sbjct: 58 SPTAATPPAPATTTPPPTPTGPTCSPSPSAANS 90
Score = 33.9 bits (76), Expect = 1.7
Identities = 23/93 (24%), Positives = 41/93 (43%), Gaps = 3/93 (3%)
Frame = +3
Query: 309 PSSPVTASPSMSPPAPPPTSSMSLNSTASSSRINPPSARLVTSPPSANP---PSPPASSS 479
P ++ S SP +P P S+ S N+ ++ PP + + P + +P P PP S
Sbjct: 4 PHGAKPSAQSPSPASPSPNSAGSPNTNPTT----PPEPKASSCPTTGSPNALPKPPNPSP 59
Query: 480 SSTSSASRGFMSPSVTSSTQMLSSSRTRLNRIP 578
++ + + +P T + S S + N P
Sbjct: 60 TAATPPAPATTTPPPTPTGPTCSPSPSAANSAP 92
>pir||T46707 proteophosphoglycan, membrane-associated [imported] - Leishmania
major (fragment) gi|5420389|emb|CAB46680.1|
proteophosphoglycan [Leishmania major]
Length = 383
Score = 72.8 bits (177), Expect = 3e-12
Identities = 64/190 (33%), Positives = 96/190 (49%), Gaps = 12/190 (6%)
Frame = +3
Query: 45 PTAKSAAVPTQPRTLFPSRTS*NQTQ*SWKP*RSSQPPHQLLHPPLPPQTKP*PSKTS-P 221
P+A S++ P+ + PS +S + S SS P P + P S +S P
Sbjct: 57 PSASSSSAPSSSSSSAPSASSSSAPSSS-----SSAPSASSSSAPSSSSSAPSASSSSAP 111
Query: 222 SPSAAARWRTSPSPPCNPTSSLSPARSRTPSSPVTASPSMSPPAPPPTSSMSL-----NS 386
S S++A +S S P + +S+ S + S PSS +++PS S + P +SS S +S
Sbjct: 112 SSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSS 171
Query: 387 TASSSRINPPSARLVTSP------PSANPPSPPASSSSSTSSASRGFMSPSVTSSTQMLS 548
SSS + PSA ++P PSA+ S P+SSSSS SAS +PS +SS S
Sbjct: 172 APSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSS-SAPSSSSSAPSSS 230
Query: 549 SSRTRLNRIP 578
S+ T ++ P
Sbjct: 231 STTTTMDPTP 240
Score = 63.9 bits (154), Expect = 2e-09
Identities = 47/120 (39%), Positives = 73/120 (60%), Gaps = 4/120 (3%)
Frame = +3
Query: 207 SKTSPSPSAAARWRTSPSPPCNPTSSLSPARSRTPSSPVTASPSMSPPAPPPTSSMSL-- 380
S ++PS S++A +S S P + +S+ S + S PSS +++PS S + P +SS S
Sbjct: 15 SSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPS 74
Query: 381 --NSTASSSRINPPSARLVTSPPSANPPSPPASSSSSTSSASRGFMSPSVTSSTQMLSSS 554
+S+A SS + PSA +S PS++ +P ASSSS+ SS+S +PS +SS+ SSS
Sbjct: 75 ASSSSAPSSSSSAPSASS-SSAPSSSSSAPSASSSSAPSSSS---SAPSASSSSAPSSSS 130
Score = 62.0 bits (149), Expect = 6e-09
Identities = 58/174 (33%), Positives = 85/174 (48%), Gaps = 4/174 (2%)
Frame = +3
Query: 45 PTAKSAAVPTQPRTLFPSRTS*NQTQ*SWKP*RSSQPPHQLLHPPLPPQTKP*PSKTSPS 224
P+A S++ P+ + PS +S SS P P + P S +S +
Sbjct: 11 PSASSSSAPSSSSSA-PSASS------------SSAPSSSSSAPSASSSSAP-SSSSSSA 56
Query: 225 PSAAARWRTSPSPPCNPTSSLSPARSRTPSSPVTAS---PSMSPPAPPPTSSMSLNSTAS 395
PSA++ S S P++S S A S + S+P +S PS S AP +SS + +S++S
Sbjct: 57 PSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSS 116
Query: 396 SSRINPPSA-RLVTSPPSANPPSPPASSSSSTSSASRGFMSPSVTSSTQMLSSS 554
+ + SA +S PSA+ S P+SSSSS SAS S +SS SSS
Sbjct: 117 APSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSS 170
Score = 61.6 bits (148), Expect = 8e-09
Identities = 46/119 (38%), Positives = 70/119 (58%)
Frame = +3
Query: 198 P*PSKTSPSPSAAARWRTSPSPPCNPTSSLSPARSRTPSSPVTASPSMSPPAPPPTSSMS 377
P S ++PS S+++ +S S P +SS + S PS+ +++PS S + P SS S
Sbjct: 4 PSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSS 63
Query: 378 LNSTASSSRINPPSARLVTSPPSANPPSPPASSSSSTSSASRGFMSPSVTSSTQMLSSS 554
S++SSS PSA +S PS++ +P ASSSS+ SS+S +PS +SS+ SSS
Sbjct: 64 APSSSSSSA---PSASS-SSAPSSSSSAPSASSSSAPSSSS---SAPSASSSSAPSSSS 115
Score = 61.2 bits (147), Expect = 1e-08
Identities = 58/175 (33%), Positives = 87/175 (49%), Gaps = 5/175 (2%)
Frame = +3
Query: 45 PTAKSAAVPTQPRTLFPSRTS*NQTQ*SWKP*RSSQPPHQLLHPPLPPQTKP*PSKTSPS 224
P+A S++ P+ + PS +S SS P P + PS +S +
Sbjct: 41 PSASSSSAPSSSSSSAPSASS------------SSAPSSSSSSAPSASSSSA-PSSSSSA 87
Query: 225 PSAAARWRTSPSPPCNPTSSLSPARSRTPSSPVTASPSMSPPAPPPTSSMSL-----NST 389
PSA+ S S P + +S+ S + S PSS +A + S AP +SS S +S
Sbjct: 88 PSAS-----SSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAP--SSSSSAPSASSSSA 140
Query: 390 ASSSRINPPSARLVTSPPSANPPSPPASSSSSTSSASRGFMSPSVTSSTQMLSSS 554
SSS + PSA ++P S++ +P ASSSS+ SS+S +PS +SS+ SSS
Sbjct: 141 PSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSS--APSASSSSAPSSSS 193
Score = 60.5 bits (145), Expect = 2e-08
Identities = 53/142 (37%), Positives = 79/142 (55%), Gaps = 5/142 (3%)
Frame = +3
Query: 144 SSQPPHQLLHPPLPPQTKP*PSKTS-PSPSAAARWRTSPSPPCNPTSSL-SPARSRTPSS 317
SS P P + P S +S PS S++A +S S P + +SS S + S PSS
Sbjct: 8 SSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSS 67
Query: 318 PVTASPSMSPPAPPPTSS---MSLNSTASSSRINPPSARLVTSPPSANPPSPPASSSSST 488
+++PS S + P +SS + +S+A SS + PSA +S PS++ +P ASSSS+
Sbjct: 68 SSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSAS-SSSAPSSSSSAPSASSSSAP 126
Query: 489 SSASRGFMSPSVTSSTQMLSSS 554
SS+S +PS +SS+ SSS
Sbjct: 127 SSSS---SAPSASSSSAPSSSS 145
Score = 59.7 bits (143), Expect = 3e-08
Identities = 51/192 (26%), Positives = 93/192 (47%), Gaps = 6/192 (3%)
Frame = +3
Query: 45 PTAKSAAVPTQPRTLFPSRTS*NQTQ*SWKP*RSSQPPHQLLHPPLPPQTKP*PSKTSPS 224
P+A S++ P+ + PS +S SS P P + P S ++PS
Sbjct: 88 PSASSSSAPSSSSSA-PSASS------------SSAPSSSSSAPSASSSSAPSSSSSAPS 134
Query: 225 PSAAARWRTSPS--PPCNPTSSLSPARSRTPSSPVTASPSMSPPAPPPTSSMSLNSTASS 398
S+++ +S S P + +S+ S + S PS+ +++PS S + P SS S S++SS
Sbjct: 135 ASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSS 194
Query: 399 ----SRINPPSARLVTSPPSANPPSPPASSSSSTSSASRGFMSPSVTSSTQMLSSSRTRL 566
S + PS+ ++P +++ +P +SSS+ +SS++ M P+ SSS +
Sbjct: 195 APSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSSSSTTTTMDPTPDPVLPSSSSSSSHA 254
Query: 567 NRIPYLMMFRAC 602
+ Y ++ C
Sbjct: 255 DTYFYDRLYLLC 266
Score = 58.5 bits (140), Expect = 7e-08
Identities = 45/114 (39%), Positives = 67/114 (58%)
Frame = +3
Query: 213 TSPSPSAAARWRTSPSPPCNPTSSLSPARSRTPSSPVTASPSMSPPAPPPTSSMSLNSTA 392
++PS S++A +S S P + +S+ S + S PSS +A PS S + P +SS S S +
Sbjct: 2 SAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSA-PSASSSSAPSSSSSSAPSAS 60
Query: 393 SSSRINPPSARLVTSPPSANPPSPPASSSSSTSSASRGFMSPSVTSSTQMLSSS 554
SSS + S+ S PSA+ S P+SSSS+ S++S +PS +SS SSS
Sbjct: 61 SSSAPSSSSS----SAPSASSSSAPSSSSSAPSASSSS--APSSSSSAPSASSS 108
Score = 57.8 bits (138), Expect = 1e-07
Identities = 56/173 (32%), Positives = 88/173 (50%), Gaps = 3/173 (1%)
Frame = +3
Query: 45 PTAKSAAVPTQPRTLFPSRTS*NQTQ*SWKP*RSSQPPHQLLHPPLPPQTKP*PSKTSPS 224
P+A S++ P+ + PS +S SS P P + S +S +
Sbjct: 26 PSASSSSAPSSSSSA-PSASS------------SSAPSSSSSSAPSASSSSAPSSSSSSA 72
Query: 225 PSAAARWRTSPSPPCNPTSSLSPARSRTPSSPVTASPSMSPPAPPPTSSM--SLNSTASS 398
PSA+ S S P + +S+ S + S PSS +A + S AP +SS + +S+A S
Sbjct: 73 PSAS-----SSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPS 127
Query: 399 SRINPPSARLVTSPPSANPPSPPASSSSS-TSSASRGFMSPSVTSSTQMLSSS 554
S + PSA ++P S++ +P ASSSS+ +SS+S +PS +SS+ SSS
Sbjct: 128 SSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSS---SAPSASSSSAPSSSS 177
Score = 47.4 bits (111), Expect = 2e-04
Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Frame = +3
Query: 279 SSLSPARSRTPSSPVTASPSMSPPAPPPTSSM---SLNSTASSSRINPPSARLVTSPPSA 449
SS + S PS+ +++PS S AP +SS S +S S+S + PS+ ++P ++
Sbjct: 1 SSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSAS 60
Query: 450 NPPSPPASSSSSTSSASRGFMSPSVTSSTQMLSSS 554
+ +P +SSSS+ S++S +PS +SS SSS
Sbjct: 61 SSSAPSSSSSSAPSASSSS--APSSSSSAPSASSS 93
>ref|NP_176464.1| hypothetical protein; protein id: At1g62763.1 [Arabidopsis
thaliana] gi|6630459|gb|AAF19547.1|AC007190_15 F23N19.12
[Arabidopsis thaliana]
Length = 312
Score = 71.2 bits (173), Expect = 1e-11
Identities = 52/122 (42%), Positives = 67/122 (54%)
Frame = +3
Query: 207 SKTSPSPSAAARWRTSPSPPCNPTSSLSPARSRTPSSPVTASPSMSPPAPPPTSSMSLNS 386
S +S SPS+++ SPSPP + SS P+ S +PSSP S S S P PPP SS L+S
Sbjct: 23 SSSSLSPSSSSP-SLSPSPPSSSPSSAPPS-SLSPSSPPPLSLSPSSPPPPPPSSSPLSS 80
Query: 387 TASSSRINPPSARLVTSPPSANPPSPPASSSSSTSSASRGFMSPSVTSSTQMLSSSRTRL 566
+ S +PPS+ ++PPS+ PS P S S SS S S SS SSS T
Sbjct: 81 LSPSLSPSPPSSSPSSAPPSSLSPSSPPPLSLSPSSPPPPPPSSSPLSSLSPSSSSSTYS 140
Query: 567 NR 572
N+
Sbjct: 141 NQ 142
Score = 62.0 bits (149), Expect = 6e-09
Identities = 53/128 (41%), Positives = 73/128 (56%), Gaps = 4/128 (3%)
Frame = +3
Query: 204 PSKTSPSPSAAARWRTSPSPPCNPTSSLSPARSRTP---SSPVTA-SPSMSPPAPPPTSS 371
PS S SPS+A SPS P P SLSP+ P SSP+++ SPS+SP PP+SS
Sbjct: 38 PSPPSSSPSSAPPSSLSPSSP--PPLSLSPSSPPPPPPSSSPLSSLSPSLSP--SPPSSS 93
Query: 372 MSLNSTASSSRINPPSARLVTSPPSANPPSPPASSSSSTSSASRGFMSPSVTSSTQMLSS 551
S+A S ++P S ++ PS+ PP PP+SS S+ +SPS +SST S
Sbjct: 94 ---PSSAPPSSLSPSSPPPLSLSPSSPPPPPPSSSPLSS-------LSPSSSSSTY---S 140
Query: 552 SRTRLNRI 575
++T L+ I
Sbjct: 141 NQTNLDYI 148
Score = 55.8 bits (133), Expect = 4e-07
Identities = 52/158 (32%), Positives = 74/158 (45%), Gaps = 6/158 (3%)
Frame = +3
Query: 144 SSQPPHQLLHPPLPPQTKP*PSKTSPS-PSAAARWRTSPSPP---CNPTSSLSPARSRTP 311
SS P PP + PS SPS P + +SP PP +P SSLSP+ S +P
Sbjct: 30 SSSSPSLSPSPPSSSPSSAPPSSLSPSSPPPLSLSPSSPPPPPPSSSPLSSLSPSLSPSP 89
Query: 312 --SSPVTASPSMSPPAPPPTSSMSLNSTASSSRINPPSARLVTSPPSANPPSPPASSSSS 485
SSP +A PS P+ PP S+S +S PP PPS++P S + SSSS
Sbjct: 90 PSSSPSSAPPSSLSPSSPPPLSLSPSSPP------PP-------PPSSSPLSSLSPSSSS 136
Query: 486 TSSASRGFMSPSVTSSTQMLSSSRTRLNRIPYLMMFRA 599
++ +++ + TS L + + PY R+
Sbjct: 137 STYSNQTNLDYIKTSCNITLYKTICYNSLSPYASTIRS 174
Score = 51.6 bits (122), Expect = 8e-06
Identities = 42/121 (34%), Positives = 57/121 (46%), Gaps = 9/121 (7%)
Frame = +3
Query: 66 VPTQPRTLFPSRTS*NQTQ*SWKP*RSSQPPHQLLHPPLPP----QTKP*PSKTSPSPSA 233
+ T +L PS +S + + SS PP L PP + P P S SP +
Sbjct: 20 ITTSSSSLSPSSSSPSLSPSPPSSSPSSAPPSSLSPSSPPPLSLSPSSPPPPPPSSSPLS 79
Query: 234 AARWRTSPSPPCN-----PTSSLSPARSRTPSSPVTASPSMSPPAPPPTSSMSLNSTASS 398
+ SPSPP + P SSLSP + P++ SPS PP PP +S +S S +SS
Sbjct: 80 SLSPSLSPSPPSSSPSSAPPSSLSP----SSPPPLSLSPSSPPPPPPSSSPLSSLSPSSS 135
Query: 399 S 401
S
Sbjct: 136 S 136
Score = 47.0 bits (110), Expect = 2e-04
Identities = 36/94 (38%), Positives = 48/94 (50%), Gaps = 1/94 (1%)
Frame = +3
Query: 300 SRTPSSPVTASPSMSPPAPPPTSSMSLNSTASSSRINPPSARLV-TSPPSANPPSPPASS 476
S + SP ++SPS+SP PP+SS S +S S +PP L +SPP P S P SS
Sbjct: 23 SSSSLSPSSSSPSLSPS--PPSSSPSSAPPSSLSPSSPPPLSLSPSSPPPPPPSSSPLSS 80
Query: 477 SSSTSSASRGFMSPSVTSSTQMLSSSRTRLNRIP 578
S + S S SPS + + SS L+ P
Sbjct: 81 LSPSLSPSPPSSSPSSAPPSSLSPSSPPPLSLSP 114
Score = 32.3 bits (72), Expect = 5.0
Identities = 41/139 (29%), Positives = 55/139 (39%), Gaps = 8/139 (5%)
Frame = +3
Query: 39 PWPTAKSAAVPTQPRTLFPSRTS*NQTQ*SWKP*RSSQPPHQLLHPPLPPQTKP*PSKTS 218
P S+ P+ P L S +S S P S P P P + P PS S
Sbjct: 45 PSSAPPSSLSPSSPPPLSLSPSSPPPPPPSSSPLSSLSPSLSPSPPSSSPSSAP-PSSLS 103
Query: 219 PS-PSAAARWRTSPSPP---CNPTSSLSPARSRTPSSPVT----ASPSMSPPAPPPTSSM 374
PS P + +SP PP +P SSLSP+ S + S T S +
Sbjct: 104 PSSPPPLSLSPSSPPPPPPSSSPLSSLSPSSSSSTYSNQTNLDYIKTSCNITLYKTICYN 163
Query: 375 SLNSTASSSRINPPSARLV 431
SL+ AS+ R NP ++
Sbjct: 164 SLSPYASTIRSNPQKLAVI 182
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 637,366,626
Number of Sequences: 1393205
Number of extensions: 18935777
Number of successful extensions: 365014
Number of sequences better than 10.0: 12981
Number of HSP's better than 10.0 without gapping: 121118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 244105
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24568846532
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
