>KMC018989A_C01 KMC018989A_c01
CATCAAACAAGACACTCGTATTCTAGAAAAAACAAAAAAGAATGAGTACATCAATGTAGG
TGTGTTGGACACAAACAATCAAAGCTGGAACTCTTTAGAATGTTGGCAACACATCTCAAA
ACCACATCAAAATCTCTATTTTCTCTAACTCCTCACTCAACTCCTCACAATCCCCCTTTT
ACTTACATAGAGTGAAAATCACGATCTTGATGTCTCACAAACTAGAAAAGAAGAACCCAA
ATTCTCCTCCCCCAGCAGCAACCGTTGATTACTACACATGCAAAAAGAACTGCTGCATGA
GATTATTATGATGGTCAAAAGAGCAAATGAATACCATTCACTGCAATGCCATCAAAAATC
GTAACCGAAGGGTGAAACCGAATAAAGTATGATCCAAGATGGACTGCAGCTAACGGATAG
GGTGATATTGAGCTGATATTCTCTTCGGCGGCAATTTGCGCAGGATGAAGAGTACTAAAG
CTGAAGGCACGATCTCAACCAGCATGTAGTAGAT

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC018989A_C01 KMC018989A_c01
         (514 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAK50579.1|AC084404_4 unknown protein [Oryza sativa]                66  3e-10
ref|NP_567636.1| putative protein; protein id: At4g21790.1, supp...    66  3e-10
gb|AAM76344.1|AC074196_2 putative transmembrane protein [Oryza s...    59  3e-08
gb|AAM52312.1|AC105363_1 Unknown protein [Oryza sativa (japonica...    59  3e-08
pir||H84433 hypothetical protein At2g02180 [imported] - Arabidop...    57  1e-07

>gb|AAK50579.1|AC084404_4 unknown protein [Oryza sativa]
          Length = 302

 Score = 65.9 bits (159), Expect = 3e-10
 Identities = 30/33 (90%), Positives = 32/33 (96%)
 Frame = -1

Query: 511 YYMLVEIVPSALVLFILRKLPPKRISAQYHPIR 413
           YYML EI+PSALVLFILRKLPPKR+SAQYHPIR
Sbjct: 270 YYMLTEILPSALVLFILRKLPPKRVSAQYHPIR 302

>ref|NP_567636.1| putative protein; protein id: At4g21790.1, supported by cDNA:
           gi_15028268, supported by cDNA: gi_19310638, supported
           by cDNA: gi_9967414 [Arabidopsis thaliana]
           gi|9967413|dbj|BAB12401.1| putative transmembrane
           protein [Arabidopsis thaliana]
           gi|9967415|dbj|BAB12402.1| putative transmembrane
           protein [Arabidopsis thaliana]
           gi|15028269|gb|AAK76723.1| unknown protein [Arabidopsis
           thaliana] gi|19310639|gb|AAL85050.1| unknown protein
           [Arabidopsis thaliana]
          Length = 291

 Score = 65.9 bits (159), Expect = 3e-10
 Identities = 29/34 (85%), Positives = 34/34 (99%)
 Frame = -1

Query: 514 IYYMLVEIVPSALVLFILRKLPPKRISAQYHPIR 413
           IYYM+VE++PSALVLFILRKLPPKR+SAQYHPI+
Sbjct: 258 IYYMVVEVLPSALVLFILRKLPPKRVSAQYHPIQ 291

>gb|AAM76344.1|AC074196_2 putative transmembrane protein [Oryza sativa (japonica
           cultivar-group)]
          Length = 294

 Score = 58.9 bits (141), Expect = 3e-08
 Identities = 28/32 (87%), Positives = 29/32 (90%)
 Frame = -1

Query: 511 YYMLVEIVPSALVLFILRKLPPKRISAQYHPI 416
           YY+LVEIVPSALVLFILRKLPPKR   QYHPI
Sbjct: 262 YYLLVEIVPSALVLFILRKLPPKRGITQYHPI 293

>gb|AAM52312.1|AC105363_1 Unknown protein [Oryza sativa (japonica cultivar-group)]
           gi|27452913|gb|AAO15297.1| Putative transmembrane
           protein [Oryza sativa (japonica cultivar-group)]
          Length = 281

 Score = 58.9 bits (141), Expect = 3e-08
 Identities = 28/32 (87%), Positives = 29/32 (90%)
 Frame = -1

Query: 511 YYMLVEIVPSALVLFILRKLPPKRISAQYHPI 416
           YY+LVEIVPSALVLFILRKLPPKR   QYHPI
Sbjct: 249 YYLLVEIVPSALVLFILRKLPPKRGITQYHPI 280

>pir||H84433 hypothetical protein At2g02180 [imported] - Arabidopsis thaliana
          Length = 92

 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 27/34 (79%), Positives = 30/34 (87%)
 Frame = -1

Query: 514 IYYMLVEIVPSALVLFILRKLPPKRISAQYHPIR 413
           IYY+LVEI+PS+LVLFILRKLPPKR   QYH IR
Sbjct: 59  IYYLLVEILPSSLVLFILRKLPPKRGITQYHQIR 92

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 419,722,118
Number of Sequences: 1393205
Number of extensions: 8517239
Number of successful extensions: 20578
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 20064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20575
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 16232377112
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MF058d03_f BP031351 1 496 2 MFB018c09_f BP035251 1 491 3 SPD091c04_f BP051258 23 514 4 MFB025c12_f BP035799 25 512

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