Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC018970A_C01 KMC018970A_c01
(435 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q40639|DPNP_ORYSA 3'(2'),5'-BISPHOSPHATE NUCLEOTIDASE (3'(2')... 137 4e-32
ref|NP_201203.1| 3(2),5-bisphosphate nucleotidase; protein id: A... 136 7e-32
gb|AAK57915.1| diphosphonucleotide phosphatase 1 [Zea mays] 136 7e-32
emb|CAC84117.1| 3'(2'),5'-bisphosphate nucleotidase [Gossypium h... 117 2e-26
ref|NP_568983.1| 3(2),5-bisphosphate nucleotidase; protein id: A... 110 5e-24
>sp|Q40639|DPNP_ORYSA 3'(2'),5'-BISPHOSPHATE NUCLEOTIDASE (3'(2'),5-BISPHOSPHONUCLEOSIDE
3'(2')-PHOSPHOHYDROLASE) (DPNPASE)
gi|7489522|pir||T03305 probable 3'(2'),5'-bisphosphate
nucleotidase (EC 3.1.3.7) - rice
gi|1109672|gb|AAC49121.1| 3'(2'),5-diphosphonucleoside
3'(2') phosphohydrolase gi|1586671|prf||2204308A
diphosphonucleoside phosphohydrolase
Length = 358
Score = 137 bits (344), Expect = 4e-32
Identities = 64/80 (80%), Positives = 75/80 (93%)
Frame = -1
Query: 435 RGDGAIYLRFPHKGYREKIWDHAAGCIVVTEAGGIVSDAAGNPLDFSKGRFLDVVSGIIV 256
RGDGAIYLRFPHKGYREKIWDHAAG IVVTEAGG+V+DA+GN LDFSKGRFLD+ +GII
Sbjct: 272 RGDGAIYLRFPHKGYREKIWDHAAGSIVVTEAGGLVTDASGNDLDFSKGRFLDLDTGIIA 331
Query: 255 TNQKLMPSLLKAVKEALNEK 196
TN++LMPSLLKAV++A+ E+
Sbjct: 332 TNKQLMPSLLKAVQDAIKEQ 351
>ref|NP_201203.1| 3(2),5-bisphosphate nucleotidase; protein id: At5g63980.1,
supported by cDNA: gi_15281147 [Arabidopsis thaliana]
gi|3913518|sp|Q42546|DPNP_ARATH 3'(2'),5'-bisphosphate
nucleotidase (3'(2'),5-bisphosphonucleoside
3'(2')-phosphohydrolase) (DPNPase)
gi|1103921|gb|AAC49263.1| 3'(2'),5'-bisphosphate
nucleotidase gi|8777311|dbj|BAA96901.1|
3'(2'),5'-bisphosphate nucleotidase [Arabidopsis
thaliana] gi|15281148|gb|AAK58887.1| inositol
polyphosphate 1-phosphatase FIERY1 [Arabidopsis
thaliana] gi|29029098|gb|AAO64928.1| At5g63980
[Arabidopsis thaliana]
Length = 353
Score = 136 bits (342), Expect = 7e-32
Identities = 66/86 (76%), Positives = 77/86 (88%), Gaps = 2/86 (2%)
Frame = -1
Query: 435 RGDGAIYLRFPHKGYREKIWDHAAGCIVVTEAGGIVSDAAGNPLDFSKGRFLDVVSGIIV 256
RGDGAIYLRFPHKGYREKIWDH AG IVVTEAGGIV+DAAG PLDFSKG++LD+ +GIIV
Sbjct: 268 RGDGAIYLRFPHKGYREKIWDHVAGAIVVTEAGGIVTDAAGKPLDFSKGKYLDLDTGIIV 327
Query: 255 TNQKLMPSLLKAVKEAL--NEKASSL 184
N+KLMP LLKAV++++ EKAS+L
Sbjct: 328 ANEKLMPLLLKAVRDSIAEQEKASAL 353
>gb|AAK57915.1| diphosphonucleotide phosphatase 1 [Zea mays]
Length = 355
Score = 136 bits (342), Expect = 7e-32
Identities = 68/86 (79%), Positives = 77/86 (89%), Gaps = 2/86 (2%)
Frame = -1
Query: 435 RGDGAIYLRFPHKGYREKIWDHAAGCIVVTEAGGIVSDAAGNPLDFSKGRFLDVVSGIIV 256
RGDGAIYLRFPHKGYREKIWDHA G IVVTEAGGIV+DAAG LDFSKGRFLD+ +GII
Sbjct: 269 RGDGAIYLRFPHKGYREKIWDHAGGSIVVTEAGGIVTDAAGKDLDFSKGRFLDLDTGIIA 328
Query: 255 TNQKLMPSLLKAVKEALNE--KASSL 184
TN++LMPSLLKAV+EA+ E +A+SL
Sbjct: 329 TNKELMPSLLKAVQEAIKETNQAASL 354
>emb|CAC84117.1| 3'(2'),5'-bisphosphate nucleotidase [Gossypium hirsutum]
Length = 216
Score = 117 bits (294), Expect = 2e-26
Identities = 58/84 (69%), Positives = 69/84 (82%)
Frame = -1
Query: 435 RGDGAIYLRFPHKGYREKIWDHAAGCIVVTEAGGIVSDAAGNPLDFSKGRFLDVVSGIIV 256
RGDGAIYLR PHKGYREKIWDHAAGCIVV+EAGG V+ + F KG++LD+ +GIIV
Sbjct: 134 RGDGAIYLRLPHKGYREKIWDHAAGCIVVSEAGG-VAQMLQAAIGFFKGKYLDLDTGIIV 192
Query: 255 TNQKLMPSLLKAVKEALNEKASSL 184
TNQKLMP L AV++++ EKASSL
Sbjct: 193 TNQKLMPLLFNAVRKSIQEKASSL 216
>ref|NP_568983.1| 3(2),5-bisphosphate nucleotidase; protein id: At5g63990.1,
supported by cDNA: 98980. [Arabidopsis thaliana]
gi|26450749|dbj|BAC42483.1| putative
3'(2'),5'-bisphosphate nucleotidase [Arabidopsis
thaliana]
Length = 357
Score = 110 bits (274), Expect = 5e-24
Identities = 51/80 (63%), Positives = 64/80 (79%)
Frame = -1
Query: 435 RGDGAIYLRFPHKGYREKIWDHAAGCIVVTEAGGIVSDAAGNPLDFSKGRFLDVVSGIIV 256
RGDG +YLRF K E IW+HAAG I+V+EAGG V+DAAGNPLDFSKG++LD GI+V
Sbjct: 265 RGDGEVYLRFTRKARPESIWNHAAGSIIVSEAGGKVTDAAGNPLDFSKGKYLDYKRGIVV 324
Query: 255 TNQKLMPSLLKAVKEALNEK 196
T QKL+P LL AV+E++ E+
Sbjct: 325 TTQKLLPRLLTAVRESIKEE 344
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 330,283,664
Number of Sequences: 1393205
Number of extensions: 6262277
Number of successful extensions: 15798
Number of sequences better than 10.0: 206
Number of HSP's better than 10.0 without gapping: 15461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15775
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 6756111528
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
