Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC018961A_C01 KMC018961A_c01
(519 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EAA21161.1| putative peptidyl prolyl cis-trans isomerase with... 39 0.027
ref|NP_189551.1| hypothetical protein; protein id: At3g29075.1 [... 39 0.036
gb|AAM78108.1| AT3g29075/MXE2_1 [Arabidopsis thaliana] 39 0.036
ref|NP_197154.1| protein kinase-like protein; protein id: At5g16... 38 0.061
ref|NP_702294.1| hypothetical protein [Plasmodium falciparum 3D7... 38 0.061
>gb|EAA21161.1| putative peptidyl prolyl cis-trans isomerase with RNA binding
region [Plasmodium yoelii yoelii]
Length = 899
Score = 39.3 bits (90), Expect = 0.027
Identities = 23/69 (33%), Positives = 39/69 (56%)
Frame = -2
Query: 464 YKNSQKKYDTEEEDHIRNEKMKFHTEEDDHIRNEKMKLKFYTEEEEDIRNEKMKFDTLFE 285
YKN + YD +D +++K + +DD RN+K + Y +++ R++K K D ++
Sbjct: 638 YKNRENGYDKYRDDKYKDDKYRDDRYKDDKYRNDKYRDDKYRDDK--YRDDKYK-DDRYK 694
Query: 284 DDTLYYKDD 258
DD YKDD
Sbjct: 695 DDR--YKDD 701
Score = 34.7 bits (78), Expect = 0.68
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Frame = -2
Query: 512 DDIQYAHPYHADPYHS--YKNSQKKYDTEEEDHIRNEKMKFHTEEDDHIRNEKMKL---- 351
DD Y D Y YK+ + K D +D R++K + + +DD + +K K
Sbjct: 690 DDRYKDDRYKDDRYKDDRYKDDRYKDDRNRDDRNRDDKYRDNRYKDDRNKTDKYKNNDKY 749
Query: 350 --KFYT-EEEEDIRNEKMKFDTLFEDDTLYYKDDDAHPY 243
K+ + E+ +D N+K +++T Y+DD + Y
Sbjct: 750 NDKYDSYEKNDDDYNKKYNKSNKLDNNTSNYRDDKKYNY 788
Score = 33.9 bits (76), Expect = 1.2
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Frame = -2
Query: 512 DDIQYAHPYHADPYHS--YKNSQKKYDTEEEDHIRNEKMKFHTEEDDHIRNEKMKLKFYT 339
DD Y D Y Y+N + + D +D R++K K +DD ++++ K Y
Sbjct: 650 DDKYKDDKYRDDRYKDDKYRNDKYRDDKYRDDKYRDDKYKDDRYKDDRYKDDRYKDDRYK 709
Query: 338 EE------EEDIRNEKMKF-DTLFEDD---TLYYKDDDAH 249
++ D RN K+ D ++DD T YK++D +
Sbjct: 710 DDRYKDDRNRDDRNRDDKYRDNRYKDDRNKTDKYKNNDKY 749
>ref|NP_189551.1| hypothetical protein; protein id: At3g29075.1 [Arabidopsis
thaliana]
Length = 294
Score = 38.9 bits (89), Expect = 0.036
Identities = 25/93 (26%), Positives = 44/93 (46%), Gaps = 5/93 (5%)
Frame = -2
Query: 518 DGDDIQYAHPYHADPYHSYKNSQKKYDTEEEDHIRNEKMKFHTEEDDHIRNEKMKLKFYT 339
DGDD H H+ Y + +K +E++ +++K + EDD + +K K ++
Sbjct: 141 DGDD---GHKKHSGK--DYDDGDEKSKKKEKEKKKDKKKDGNNSEDDEFKKKKKKEQYKE 195
Query: 338 EEEEDIRNEKMKFDTLFEDD-----TLYYKDDD 255
++D +EK K + DD +Y DDD
Sbjct: 196 HHDDDDYDEKKKKKKDYNDDDEKKKKKHYNDDD 228
Score = 33.5 bits (75), Expect = 1.5
Identities = 20/71 (28%), Positives = 36/71 (50%)
Frame = -2
Query: 452 QKKYDTEEEDHIRNEKMKFHTEEDDHIRNEKMKLKFYTEEEEDIRNEKMKFDTLFEDDTL 273
+KK++ ++D + +K ++H +ED K K K Y ++++ +K K D +DD
Sbjct: 232 KKKHNYNDDDDEKKKKKEYHDDED------KKKKKHYDNDDDE---KKKKKDHRDDDDEK 282
Query: 272 YYKDDDAHPYH 240
K D H H
Sbjct: 283 KKKKDKHHKGH 293
>gb|AAM78108.1| AT3g29075/MXE2_1 [Arabidopsis thaliana]
Length = 242
Score = 38.9 bits (89), Expect = 0.036
Identities = 25/93 (26%), Positives = 44/93 (46%), Gaps = 5/93 (5%)
Frame = -2
Query: 518 DGDDIQYAHPYHADPYHSYKNSQKKYDTEEEDHIRNEKMKFHTEEDDHIRNEKMKLKFYT 339
DGDD H H+ Y + +K +E++ +++K + EDD + +K K ++
Sbjct: 141 DGDD---GHKKHSGK--DYDDGDEKSKKKEKEKKKDKKKDGNNSEDDEFKKKKKKEQYKE 195
Query: 338 EEEEDIRNEKMKFDTLFEDD-----TLYYKDDD 255
++D +EK K + DD +Y DDD
Sbjct: 196 HHDDDDYDEKKKKKKDYNDDDEKKKKKHYNDDD 228
>ref|NP_197154.1| protein kinase-like protein; protein id: At5g16500.1 [Arabidopsis
thaliana] gi|9759133|dbj|BAB09618.1| protein kinase-like
protein [Arabidopsis thaliana]
Length = 608
Score = 38.1 bits (87), Expect = 0.061
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Frame = -2
Query: 443 YDTEEEDHIRNEKMKFHTEEDDHIRNEKMKLKFYT---EEEEDIRNEKMKFDTLF---ED 282
+D +EED N + + +++ DD RN M++ + +EEE+ N + + + + +
Sbjct: 515 HDDKEEDEEENHETRSYSDHDDSPRNTSMRINSLSHDDDEEEEEENHQTRLEHIHSSKSE 574
Query: 281 DTLYYKDDDA 252
D Y DDDA
Sbjct: 575 DQSVYSDDDA 584
>ref|NP_702294.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23497475|gb|AAN37018.1|AE014822_53 hypothetical
protein [Plasmodium falciparum 3D7]
Length = 2511
Score = 38.1 bits (87), Expect = 0.061
Identities = 20/67 (29%), Positives = 38/67 (55%), Gaps = 3/67 (4%)
Frame = -2
Query: 461 KNSQKKYDTEEEDHIRNEKMKFHTEEDDHIRNEKM---KLKFYTEEEEDIRNEKMKFDTL 291
+N K + + +HIRNE ++ +++HI+NE + K+K + E I+NE +K +
Sbjct: 242 RNEHIKNEYIKNEHIRNEHIRNEHIKNEHIKNENINNEKIKNENIKNEKIKNENIKNKKI 301
Query: 290 FEDDTLY 270
+ T+Y
Sbjct: 302 KNEKTIY 308
Score = 36.2 bits (82), Expect = 0.23
Identities = 21/67 (31%), Positives = 35/67 (51%), Gaps = 10/67 (14%)
Frame = -2
Query: 473 YHSYKNSQKKYDTEE-------EDHIRNEKMKFHTEEDDHIRNEKMKLKFYTEE---EED 324
Y KN ++++ + +HIRNE ++ ++HIRNE +K ++ E E
Sbjct: 201 YEKIKNKKEQWQKRKLKNEHIRNEHIRNEYIRNEHIRNEHIRNEHIKNEYIKNEHIRNEH 260
Query: 323 IRNEKMK 303
IRNE +K
Sbjct: 261 IRNEHIK 267
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 438,662,736
Number of Sequences: 1393205
Number of extensions: 9433025
Number of successful extensions: 53521
Number of sequences better than 10.0: 331
Number of HSP's better than 10.0 without gapping: 43145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51305
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16442828304
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
