Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC018921A_C01 KMC018921A_c01
(533 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK09427.2|AF322116_1 sucrose-phosphate synthase [Medicago sa... 53 3e-06
sp|Q43876|SPS_VICFA Sucrose-phosphate synthase (UDP-glucose-fruc... 52 3e-06
sp|O22060|SPS1_CITUN SUCROSE-PHOSPHATE SYNTHASE 1 (UDP-GLUCOSE-F... 51 1e-05
dbj|BAB18136.1| sucrose-phosphate synthase [Lycopersicon esculen... 50 1e-05
sp|Q43845|SPS_SOLTU SUCROSE-PHOSPHATE SYNTHASE (UDP-GLUCOSE-FRUC... 50 1e-05
>gb|AAK09427.2|AF322116_1 sucrose-phosphate synthase [Medicago sativa]
Length = 1058
Score = 52.8 bits (125), Expect = 3e-06
Identities = 31/59 (52%), Positives = 33/59 (55%)
Frame = -2
Query: 340 KNGRSFDIHLVCFMNCYVLIVNLPLRCACRSHDQQSIADALSKLVSNKQLWVKCRHNGV 164
KNG DIH V V HDQ+SIADAL KLVSNKQLW KCR NG+
Sbjct: 598 KNGGPVDIHRVLDNGLLV-----------DPHDQKSIADALLKLVSNKQLWAKCRLNGL 645
>sp|Q43876|SPS_VICFA Sucrose-phosphate synthase (UDP-glucose-fructose-phosphate
glucosyltransferase) gi|7433841|pir||T12195
sucrose-phosphate synthase (EC 2.4.1.14) - fava bean
gi|1022365|emb|CAA91217.1| sucrose phosphate synthase
[Vicia faba]
Length = 1059
Score = 52.4 bits (124), Expect = 3e-06
Identities = 29/59 (49%), Positives = 33/59 (55%)
Frame = -2
Query: 340 KNGRSFDIHLVCFMNCYVLIVNLPLRCACRSHDQQSIADALSKLVSNKQLWVKCRHNGV 164
KNG DIH V + HD++SIADAL KLVSNKQLW KCR NG+
Sbjct: 599 KNGGPVDIHRVLDNGLLI-----------DPHDEKSIADALLKLVSNKQLWAKCRQNGL 646
>sp|O22060|SPS1_CITUN SUCROSE-PHOSPHATE SYNTHASE 1 (UDP-GLUCOSE-FRUCTOSE-PHOSPHATE
GLUCOSYLTRANSFERASE 1) gi|7433838|pir||S72648
sucrose-phosphate synthase (EC 2.4.1.14) isoform 1 -
Citrus unshiu gi|2588888|dbj|BAA23213.1|
sucrose-phosphate synthase [Citrus unshiu]
Length = 1057
Score = 50.8 bits (120), Expect = 1e-05
Identities = 29/59 (49%), Positives = 32/59 (54%)
Frame = -2
Query: 340 KNGRSFDIHLVCFMNCYVLIVNLPLRCACRSHDQQSIADALSKLVSNKQLWVKCRHNGV 164
KNG DIH V V HDQQSIADAL KLV+ KQLW +CR NG+
Sbjct: 598 KNGGPVDIHRVLDNGLLV-----------DPHDQQSIADALLKLVAGKQLWARCRQNGL 645
>dbj|BAB18136.1| sucrose-phosphate synthase [Lycopersicon esculentum]
Length = 1053
Score = 50.4 bits (119), Expect = 1e-05
Identities = 29/59 (49%), Positives = 33/59 (55%)
Frame = -2
Query: 340 KNGRSFDIHLVCFMNCYVLIVNLPLRCACRSHDQQSIADALSKLVSNKQLWVKCRHNGV 164
KNG DIH V V HDQQ+IADAL KLV++KQLW KCR NG+
Sbjct: 597 KNGGPVDIHRVLDNGLLV-----------DPHDQQAIADALLKLVADKQLWAKCRANGL 644
>sp|Q43845|SPS_SOLTU SUCROSE-PHOSPHATE SYNTHASE (UDP-GLUCOSE-FRUCTOSE-PHOSPHATE
GLUCOSYLTRANSFERASE) gi|421958|pir||S34172
sucrose-phosphate synthase (EC 2.4.1.14) - potato
gi|313265|emb|CAA51872.1| sucrose-phosphate synthase
[Solanum tuberosum]
Length = 1053
Score = 50.4 bits (119), Expect = 1e-05
Identities = 29/59 (49%), Positives = 33/59 (55%)
Frame = -2
Query: 340 KNGRSFDIHLVCFMNCYVLIVNLPLRCACRSHDQQSIADALSKLVSNKQLWVKCRHNGV 164
KNG DIH V V HDQQ+IADAL KLV++KQLW KCR NG+
Sbjct: 596 KNGGPVDIHRVLDNGLLV-----------DPHDQQAIADALLKLVADKQLWAKCRANGL 643
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 398,046,286
Number of Sequences: 1393205
Number of extensions: 7761475
Number of successful extensions: 15093
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 14682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15077
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17885181664
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
