Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC018871A_C01 KMC018871A_c01
(573 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB08888.1| gene_id:MIJ24.6~ref|NP_013897.1~similar to unkno... 194 9e-49
gb|AAN60241.1| unknown [Arabidopsis thaliana] 194 9e-49
ref|NP_189551.1| hypothetical protein; protein id: At3g29075.1 [... 139 3e-32
gb|AAM78108.1| AT3g29075/MXE2_1 [Arabidopsis thaliana] 139 3e-32
ref|NP_172611.1| similar to serine/threonine protein kinase emb|... 70 1e-11
>dbj|BAB08888.1| gene_id:MIJ24.6~ref|NP_013897.1~similar to unknown protein
[Arabidopsis thaliana] gi|16604364|gb|AAL24188.1|
AT5g39570/MIJ24_40 [Arabidopsis thaliana]
gi|23308191|gb|AAN18065.1| At5g39570/MIJ24_40
[Arabidopsis thaliana]
Length = 381
Score = 194 bits (492), Expect = 9e-49
Identities = 107/195 (54%), Positives = 131/195 (66%), Gaps = 17/195 (8%)
Frame = +3
Query: 36 MGFFSRNRGDDDTVDDFDDYDPTPYGGGYDINLTYGRPIPPSDETCYPI-GGSDESFDYD 212
M +++R DD+ VDDFD++DPTPY GGYDI + YGRPIPPSDETCYP+ G D+ F+Y+
Sbjct: 1 MPYYTR---DDNDVDDFDEFDPTPYSGGYDITVIYGRPIPPSDETCYPLSSGVDDDFEYE 57
Query: 213 RPQYSSHAEPSAYANEALDVEYSSYSRPKPRPA--PASFNPGY---DRPSSEY--ESGYG 371
RP+++ EPSAY +EAL+ EYSSYSRPKPRPA P S G+ +RP+ Y ESGYG
Sbjct: 58 RPEFTQIHEPSAYGDEALNTEYSSYSRPKPRPAFRPDSGGGGHVQGERPNPGYGSESGYG 117
Query: 372 RKPESEYSGLEYGSGYGRKQEHQV---TGSEYGSGYGGRKQESSEYGSGYGRKQE----- 527
RKPES EYGSGYG + E + YGSGYGGR + SEYGSG G + E
Sbjct: 118 RKPES-----EYGSGYGGQTEVEYGRRPEQSYGSGYGGRTETESEYGSGGGGRTEVEYGR 172
Query: 528 -SESEYGSGYEQKQE 569
ES GSGY + E
Sbjct: 173 RPESGLGSGYGGRSE 187
Score = 33.9 bits (76), Expect = 1.5
Identities = 41/161 (25%), Positives = 55/161 (33%), Gaps = 6/161 (3%)
Frame = +3
Query: 108 YGGGYDINLTYGRPIPPSDETCYPIGGSDESFDYDRPQYSSHAEPSAYANEALDVEYSSY 287
YGG + YG GG +Y R S +E+ SY
Sbjct: 148 YGGRTETESEYGSG-----------GGGRTEVEYGRRPESGLGSGYGGRSESEYERKPSY 196
Query: 288 SRPKPRPAPASFNPGYDRPSSEYESGYGRKPESEYSGLEYGSGYGRKQEHQVTGSEYGSG 467
R + + GY +PS YGR E E G S YGR +E + + G
Sbjct: 197 GRSEEQ------EEGYRKPS------YGRSEEQE-EGYRKPS-YGRSEEQEEGYRKPSYG 242
Query: 468 YGGRKQESSEYGSGYGRKQESES------EYGSGYEQKQEY 572
+QE YGR +E E YG +Q + Y
Sbjct: 243 RSEEEQEEGYRKPSYGRSEEQEEGSYRKPSYGRSDDQVESY 283
Score = 32.7 bits (73), Expect = 3.3
Identities = 38/190 (20%), Positives = 61/190 (32%), Gaps = 5/190 (2%)
Frame = +3
Query: 18 KTREKHMGFFSRNRGDDDTVDDFDDYDPTPYGGGYDINLTYGRPIPPSDETCYPIGGSDE 197
++ E+ G+ + G + ++ Y YG + Y +P Y ++
Sbjct: 198 RSEEQEEGYRKPSYGRSEEQEE--GYRKPSYGRSEEQEEGYRKP-------SYGRSEEEQ 248
Query: 198 SFDYDRPQY--SSHAEPSAYANEAL---DVEYSSYSRPKPRPAPASFNPGYDRPSSEYES 362
Y +P Y S E +Y + D + SY +P + Y +PS
Sbjct: 249 EEGYRKPSYGRSEEQEEGSYRKPSYGRSDDQVESYIKPSYGRSEEQEEGSYRKPS----- 303
Query: 363 GYGRKPESEYSGLEYGSGYGRKQEHQVTGSEYGSGYGGRKQESSEYGSGYGRKQESESEY 542
YGR E E YGR + G +E S YG E E
Sbjct: 304 -YGRSEEQEEGSYRKQPSYGRGNDDDDDEQRRNRSGSGDDEEGSYGRKKYGGNDSDEDEE 362
Query: 543 GSGYEQKQEY 572
+ K +
Sbjct: 363 KKKHRHKHHH 372
>gb|AAN60241.1| unknown [Arabidopsis thaliana]
Length = 381
Score = 194 bits (492), Expect = 9e-49
Identities = 107/195 (54%), Positives = 131/195 (66%), Gaps = 17/195 (8%)
Frame = +3
Query: 36 MGFFSRNRGDDDTVDDFDDYDPTPYGGGYDINLTYGRPIPPSDETCYPI-GGSDESFDYD 212
M +++R DD+ VDDFD++DPTPY GGYDI + YGRPIPPSDETCYP+ G D+ F+Y+
Sbjct: 1 MPYYTR---DDNDVDDFDEFDPTPYSGGYDITVIYGRPIPPSDETCYPLSSGVDDDFEYE 57
Query: 213 RPQYSSHAEPSAYANEALDVEYSSYSRPKPRPA--PASFNPGY---DRPSSEY--ESGYG 371
RP+++ EPSAY +EAL+ EYSSYSRPKPRPA P S G+ +RP+ Y ESGYG
Sbjct: 58 RPEFTXIHEPSAYGDEALNTEYSSYSRPKPRPAFRPDSGGGGHVQGERPNPGYGSESGYG 117
Query: 372 RKPESEYSGLEYGSGYGRKQEHQV---TGSEYGSGYGGRKQESSEYGSGYGRKQE----- 527
RKPES EYGSGYG + E + YGSGYGGR + SEYGSG G + E
Sbjct: 118 RKPES-----EYGSGYGGQTEVEYGRRPEQSYGSGYGGRTETESEYGSGGGGRTEVEYGR 172
Query: 528 -SESEYGSGYEQKQE 569
ES GSGY + E
Sbjct: 173 RPESGLGSGYGGRSE 187
Score = 33.9 bits (76), Expect = 1.5
Identities = 41/161 (25%), Positives = 55/161 (33%), Gaps = 6/161 (3%)
Frame = +3
Query: 108 YGGGYDINLTYGRPIPPSDETCYPIGGSDESFDYDRPQYSSHAEPSAYANEALDVEYSSY 287
YGG + YG GG +Y R S +E+ SY
Sbjct: 148 YGGRTETESEYGSG-----------GGGRTEVEYGRRPESGLGSGYGGRSESEYERKPSY 196
Query: 288 SRPKPRPAPASFNPGYDRPSSEYESGYGRKPESEYSGLEYGSGYGRKQEHQVTGSEYGSG 467
R + + GY +PS YGR E E G S YGR +E + + G
Sbjct: 197 GRSEEQ------EEGYRKPS------YGRSEEQE-EGYRKPS-YGRSEEQEEGYRKPSYG 242
Query: 468 YGGRKQESSEYGSGYGRKQESES------EYGSGYEQKQEY 572
+QE YGR +E E YG +Q + Y
Sbjct: 243 RSEEEQEEGYRKPSYGRSEEQEEGSYRKPSYGRSDDQVESY 283
Score = 32.7 bits (73), Expect = 3.3
Identities = 38/190 (20%), Positives = 61/190 (32%), Gaps = 5/190 (2%)
Frame = +3
Query: 18 KTREKHMGFFSRNRGDDDTVDDFDDYDPTPYGGGYDINLTYGRPIPPSDETCYPIGGSDE 197
++ E+ G+ + G + ++ Y YG + Y +P Y ++
Sbjct: 198 RSEEQEEGYRKPSYGRSEEQEE--GYRKPSYGRSEEQEEGYRKP-------SYGRSEEEQ 248
Query: 198 SFDYDRPQY--SSHAEPSAYANEAL---DVEYSSYSRPKPRPAPASFNPGYDRPSSEYES 362
Y +P Y S E +Y + D + SY +P + Y +PS
Sbjct: 249 EEGYRKPSYGRSEEQEEGSYRKPSYGRSDDQVESYIKPSYGRSEEQEEGSYRKPS----- 303
Query: 363 GYGRKPESEYSGLEYGSGYGRKQEHQVTGSEYGSGYGGRKQESSEYGSGYGRKQESESEY 542
YGR E E YGR + G +E S YG E E
Sbjct: 304 -YGRSEEQEEGSYRKQPSYGRGNDDDDDEQRRNRSGSGDDEEGSYGRKKYGGNDSDEDEE 362
Query: 543 GSGYEQKQEY 572
+ K +
Sbjct: 363 KKKHRHKHHH 372
>ref|NP_189551.1| hypothetical protein; protein id: At3g29075.1 [Arabidopsis
thaliana]
Length = 294
Score = 139 bits (349), Expect = 3e-32
Identities = 79/175 (45%), Positives = 107/175 (61%), Gaps = 6/175 (3%)
Frame = +3
Query: 63 DDDTVDDFDDYDPTPYGGGYDINLTYGRPIPPSDETCYPIGG-SDESFDYDRPQYSSHAE 239
DD+ VDDF +YDP PY GGYDI +TYGR IPPSDETCYP+ S ++F+Y RP +SS+ +
Sbjct: 7 DDNDVDDFTEYDPMPYSGGYDITVTYGRSIPPSDETCYPLSSLSGDAFEYQRPNFSSNHD 66
Query: 240 PSAYANEALDVEYSSYSRPKPRPAPASFNPGYDRPSSEY----ESGYGRKPESEYSGLEY 407
SAY ++AL EYSSY+RP P + + F +P+S Y E YGRK ES E+
Sbjct: 67 SSAYDDQALKTEYSSYARPGPVGSGSDFG---RKPNSGYGGRTEVEYGRKTES-----EH 118
Query: 408 GSGYGRKQEHQVTGSEY-GSGYGGRKQESSEYGSGYGRKQESESEYGSGYEQKQE 569
GSGYG + E S+Y YGG + + + G K+ S +Y G E+ ++
Sbjct: 119 GSGYGGRIE-----SDYVKPSYGGHEDDGDD-----GHKKHSGKDYDDGDEKSKK 163
>gb|AAM78108.1| AT3g29075/MXE2_1 [Arabidopsis thaliana]
Length = 242
Score = 139 bits (349), Expect = 3e-32
Identities = 79/175 (45%), Positives = 107/175 (61%), Gaps = 6/175 (3%)
Frame = +3
Query: 63 DDDTVDDFDDYDPTPYGGGYDINLTYGRPIPPSDETCYPIGG-SDESFDYDRPQYSSHAE 239
DD+ VDDF +YDP PY GGYDI +TYGR IPPSDETCYP+ S ++F+Y RP +SS+ +
Sbjct: 7 DDNDVDDFTEYDPMPYSGGYDITVTYGRSIPPSDETCYPLSSLSGDAFEYQRPNFSSNHD 66
Query: 240 PSAYANEALDVEYSSYSRPKPRPAPASFNPGYDRPSSEY----ESGYGRKPESEYSGLEY 407
SAY ++AL EYSSY+RP P + + F +P+S Y E YGRK ES E+
Sbjct: 67 SSAYDDQALKTEYSSYARPGPVGSGSDFG---RKPNSGYGGRTEVEYGRKTES-----EH 118
Query: 408 GSGYGRKQEHQVTGSEY-GSGYGGRKQESSEYGSGYGRKQESESEYGSGYEQKQE 569
GSGYG + E S+Y YGG + + + G K+ S +Y G E+ ++
Sbjct: 119 GSGYGGRIE-----SDYVKPSYGGHEDDGDD-----GHKKHSGKDYDDGDEKSKK 163
>ref|NP_172611.1| similar to serine/threonine protein kinase emb|CAA69216; protein
id: At1g11440.1 [Arabidopsis thaliana]
gi|25402662|pir||B86248 protein T23J18.11 [imported] -
Arabidopsis thaliana gi|6554183|gb|AAF16629.1|AC011661_7
T23J18.11 [Arabidopsis thaliana]
gi|26450714|dbj|BAC42466.1| putative serine/threonine
protein kinase [Arabidopsis thaliana]
Length = 363
Score = 70.5 bits (171), Expect = 1e-11
Identities = 55/186 (29%), Positives = 78/186 (41%), Gaps = 30/186 (16%)
Frame = +3
Query: 81 DFDDYDPTPYGGGYDINLTYGRPIPPSDETCYPIGGSDESFDYDRPQYSSHAEPSAYANE 260
+FD+YDPTPYGGGYD+ TYG+P+PPS ETCYP + + P+ + Y
Sbjct: 130 EFDEYDPTPYGGGYDVVATYGKPLPPSVETCYPCSTAPHAKAPSPPEIIAPVPLGIYDGG 189
Query: 261 ALDV--EYSSYSRPKPRPAPASF--------NPGYDRPSSEYESGYGRKPESEYSGLE-- 404
+V + S++ P P + YD S + + G E E E
Sbjct: 190 QKNVVKKRVSFAEPVEEVKPIETIKEQEQEQDEDYDEESEDEDDGDDDDEEEEEGDEEAK 249
Query: 405 -----YGSGYGRKQEHQVTGSE-----YGSGYGGRKQESSE-YGSGY-------GRKQES 530
+ S YG ++ V E SGYG + E GY R+QE
Sbjct: 250 EEEKDHSSSYGNEEYEVVDKGEVKALYVPSGYGLEATDLCEVIFGGYFPCVLRNKRRQED 309
Query: 531 ESEYGS 548
E + G+
Sbjct: 310 EQDRGA 315
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.316 0.131 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 602,703,963
Number of Sequences: 1393205
Number of extensions: 17715985
Number of successful extensions: 133652
Number of sequences better than 10.0: 2317
Number of HSP's better than 10.0 without gapping: 81467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 116805
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 21243732558
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
