Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC018869A_C01 KMC018869A_c01
(477 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9SZX3|ASSY_ARATH Argininosuccinate synthase, chloroplast pre... 136 1e-31
pir||T06667 argininosuccinate synthase (EC 6.3.4.5) - Arabidopsi... 136 1e-31
ref|NP_194214.2| argininosuccinate synthase -like protein; prote... 136 1e-31
gb|AAN87486.1| Argininosuccinate synthase [Heliobacillus mobilis] 100 1e-20
ref|ZP_00059782.1| hypothetical protein [Clostridium thermocellu... 95 4e-19
>sp|Q9SZX3|ASSY_ARATH Argininosuccinate synthase, chloroplast precursor
(Citrulline--aspartate ligase)
Length = 523
Score = 136 bits (342), Expect = 1e-31
Identities = 63/82 (76%), Positives = 75/82 (90%)
Frame = -3
Query: 475 WFDPLRESLDAFMHKITETTTGSVTLKLYKGSAAVTGRKSPYSLYREDISSFDTGDLYNH 296
WFDPLRES+DAFM KITETTTGSVTLKLYKGS +VTGR+SP SLYR+DISSF+ ++YN
Sbjct: 440 WFDPLRESMDAFMEKITETTTGSVTLKLYKGSVSVTGRQSPNSLYRQDISSFEGSEIYNQ 499
Query: 295 ADAVGFIKLYGLPMRIRAMMQQ 230
ADA GFI+LYGLPM+IRAM+++
Sbjct: 500 ADAAGFIRLYGLPMKIRAMLKK 521
>pir||T06667 argininosuccinate synthase (EC 6.3.4.5) - Arabidopsis thaliana
gi|4678262|emb|CAB41123.1| argininosuccinate
synthase-like protein [Arabidopsis thaliana]
gi|7269334|emb|CAB79393.1| argininosuccinate
synthase-like protein [Arabidopsis thaliana]
Length = 498
Score = 136 bits (342), Expect = 1e-31
Identities = 63/82 (76%), Positives = 75/82 (90%)
Frame = -3
Query: 475 WFDPLRESLDAFMHKITETTTGSVTLKLYKGSAAVTGRKSPYSLYREDISSFDTGDLYNH 296
WFDPLRES+DAFM KITETTTGSVTLKLYKGS +VTGR+SP SLYR+DISSF+ ++YN
Sbjct: 415 WFDPLRESMDAFMEKITETTTGSVTLKLYKGSVSVTGRQSPNSLYRQDISSFEGSEIYNQ 474
Query: 295 ADAVGFIKLYGLPMRIRAMMQQ 230
ADA GFI+LYGLPM+IRAM+++
Sbjct: 475 ADAAGFIRLYGLPMKIRAMLKK 496
>ref|NP_194214.2| argininosuccinate synthase -like protein; protein id: At4g24830.1,
supported by cDNA: gi_17529035, supported by cDNA:
gi_20259084 [Arabidopsis thaliana]
gi|17529036|gb|AAL38728.1| putative argininosuccinate
synthase [Arabidopsis thaliana]
gi|20259085|gb|AAM14258.1| putative argininosuccinate
synthase [Arabidopsis thaliana]
Length = 494
Score = 136 bits (342), Expect = 1e-31
Identities = 63/82 (76%), Positives = 75/82 (90%)
Frame = -3
Query: 475 WFDPLRESLDAFMHKITETTTGSVTLKLYKGSAAVTGRKSPYSLYREDISSFDTGDLYNH 296
WFDPLRES+DAFM KITETTTGSVTLKLYKGS +VTGR+SP SLYR+DISSF+ ++YN
Sbjct: 411 WFDPLRESMDAFMEKITETTTGSVTLKLYKGSVSVTGRQSPNSLYRQDISSFEGSEIYNQ 470
Query: 295 ADAVGFIKLYGLPMRIRAMMQQ 230
ADA GFI+LYGLPM+IRAM+++
Sbjct: 471 ADAAGFIRLYGLPMKIRAMLKK 492
>gb|AAN87486.1| Argininosuccinate synthase [Heliobacillus mobilis]
Length = 408
Score = 100 bits (248), Expect = 1e-20
Identities = 44/82 (53%), Positives = 60/82 (72%)
Frame = -3
Query: 475 WFDPLRESLDAFMHKITETTTGSVTLKLYKGSAAVTGRKSPYSLYREDISSFDTGDLYNH 296
W+ PLR+++DAF+ ET TG V +KL+KGS G KSPYSLY E+ S+F ++YN
Sbjct: 322 WYHPLRKAIDAFVDVTQETVTGLVRMKLFKGSVTPAGAKSPYSLYNEEFSTFGRDEVYNQ 381
Query: 295 ADAVGFIKLYGLPMRIRAMMQQ 230
DA GFI L+GLPM++RA+M+Q
Sbjct: 382 KDAEGFINLFGLPMKVRALMEQ 403
>ref|ZP_00059782.1| hypothetical protein [Clostridium thermocellum ATCC 27405]
Length = 405
Score = 94.7 bits (234), Expect = 4e-19
Identities = 42/82 (51%), Positives = 60/82 (72%)
Frame = -3
Query: 475 WFDPLRESLDAFMHKITETTTGSVTLKLYKGSAAVTGRKSPYSLYREDISSFDTGDLYNH 296
W+ PLRE++ AF+ ET TG+V LKLYKG+ G KS YSLY E++S+F ++YN
Sbjct: 319 WYTPLREAISAFVDVTQETVTGTVRLKLYKGNIISAGAKSDYSLYSEELSTFGEDNVYNQ 378
Query: 295 ADAVGFIKLYGLPMRIRAMMQQ 230
DA GFI L+GLPM+++A+M++
Sbjct: 379 KDAEGFINLFGLPMKVQALMKE 400
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 346,709,689
Number of Sequences: 1393205
Number of extensions: 6514344
Number of successful extensions: 14870
Number of sequences better than 10.0: 136
Number of HSP's better than 10.0 without gapping: 14580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14833
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 13106568690
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
